BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937643
Length=5750
Score E
Sequences producing significant alignments: (Bits) Value
AT3G48770.1 | Symbols: | DNA binding;ATP binding | chr3:180784... 8107 0.0
AT3G28020.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 189 3e-46
> AT3G48770.1 | Symbols: | DNA binding;ATP binding | chr3:18078474-18086817
REVERSE LENGTH=6125
Length=6125
Score = 8107 bits (4390), Expect = 0.0
Identities = 5282/5718 (92%), Gaps = 39/5718 (1%)
Strand=Plus/Plus
Query 39 GGAAAAAGCTTTTTCACCAAATGCAAGCAATATAAAGCAAGAGAAATCTGTGC-AA-CGT 96
||| || ||||||||||||||| ||||||||||||||||||||||||| || | || |||
Sbjct 3 GGAGAAGGCTTTTTCACCAAATACAAGCAATATAAAGCAAGAGAAATC-GT-CGAACCGT 60
Query 97 TCCACACGTCATCAGAAACAAGATTTGGCGTGGAACTATGTTA-ATGAAACTATTGATTC 155
| | || ||||||| |||||||||||||| ||||||||||||| | ||| ||||||||||
Sbjct 61 T-C-CA-GTCATCACAAACAAGATTTGGCTTGGAACTATGTTAGA-GAAGCTATTGATTC 116
Query 156 AAGAGGGAAAAAAGTTATAGCTTGTGACTTTTGTGGTAAACAATATGTTGGAAGTGAAAT 215
|||| ||| |||||||||| |||||| |||||||||||||||||| ||||||||||||||
Sbjct 117 AAGACGGAGAAAAGTTATAACTTGTGGCTTTTGTGGTAAACAATACGTTGGAAGTGAAAT 176
Query 216 AAATAGAATGAAACATCACTTGGCTGGATTGACTAACAGAAGTGCATGCCAAAAGGTTTC 275
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 177 AAATAGAATGAAACATCACTTGGCTGGATTGAATAATAGAAGTGCATGCCAAAAGGTTTC 236
Query 276 TTCCAAGGTTCAACATTCGATGAGAAAATCATTGGAAGAAAACGAAGAGAAATCGAAGAA 335
|||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 237 TTCCGAGGTTCAACATTCGATGAGAAAATCATTGGAAGAAAACAAAGAGAAACCGAAGAA 296
Query 336 AATAATCATTGTGGATCTTGATATGCAAGACGATGAAGTAAAGGTTGGTCAAAGTTCTCA 395
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 297 AATAATCGTTGTGGATCTTGATATGCAAGACGATGAAGTAAATGTTGGTCAAAGTTCTCA 356
Query 396 TCAATCTTGCAGTTCTTCAAGTCGAAAAAGAAAGGTTCAACATTCCATGAGAAAATCATT 455
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 357 TCAATCTTGCAGTTCTTCAAGTCGAAAAAGAAAGGTTCAACATTCGATGAGAAAATCATT 416
Query 456 GAAAGAAAACGAAGAGAAACTGAAGAAAATAATCGTTGTGGATCTTGATATGCAAGACGA 515
| |||||| |||||||||||||||| ||||||| ||||| |||||||||||||||||| |
Sbjct 417 GGAAGAAACCGAAGAGAAACTGAAGCAAATAATTGTTGTTGATCTTGATATGCAAGACAA 476
Query 516 TGAAGTCCATGTTGGTCAAAGTTCTCATCAATCATTCAGTTCTTCAAATCGAAAAAGAAA 575
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 477 TGAAGTAAATGTTGGTCAAAGTTCTCTTCAATCATTCAGTTCTTCAAATCGAAAAAGAAA 536
Query 576 GAGAGAAACCAAAACCAAACCAG---TAAGAGAAACAATGGCGGAATCGGCTAAGCAACA 632
||||||||||||||| ||||||| ||| ||| |||||| |||||||||||||||||||
Sbjct 537 GAGAGAAACCAAAACAAAACCAGTAATAATAGAGACAATGACGGAATCGGCTAAGCAACA 596
Query 633 CGTTGAACGAATTCGTCGGACTAAGTTTTCAATCGGTGGTGCTGAAAATCCGTTGACGGA 692
| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 597 CATTGAACGAATTCGTCGGACTAAGTTTTCAATCGGTGGAGCTGAGAATCCGTTGACGGA 656
Query 693 GGATCTTCATCAGGCTGTGAAGAATCTCTCCGCTGAGCTCTATGCTAAGGATGTTCACTT 752
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 657 GGATCTTCATCAAGCTGTGAAGAATCTCTCCGCTGAGCTCTATGCAAAGGATGTTCACTT 716
Query 753 CCTCATGGAGCTTATCCAAAATGCTGAAGATAACGAGTATCCGGAAGGTGTGGATCCATC 812
|| ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 717 TCTTATGGAACTTATCCAAAATGCGGAAGATAACGAGTATCCAGAAGGTGTGGATCCATC 776
Query 813 TCTTGAGTTTGTGATAACATCTGACGATATCACGGCCACCGGAGCTCCAGCCACTCTCCT 872
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||
Sbjct 777 TCTTGAATTTGTGATAACATCTGAGGATATCACAAACACCGGAGCTCCAGCCACTCTTCT 836
Query 873 TATTTTCAACAATGAGAAAGGTTTCTCTGAGAAAAACATTGACTCCATTTGCAGTGTTGG 932
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
Sbjct 837 TATTTTCAACAATGAGAAAGGTTTCTCTGAGAAAAACATTGAGTCCATCTGCAGTGTT-G 895
Query 933 GA-GGTCTACCAAGAAAGGCAATCGAAAACGCGGTTATATTGGAGAGAAAGGTATCGGTT 991
|| ||||||| |||||||||||||||||| ||||||| || ||||||||||| |||||||
Sbjct 896 GACGGTCTACAAAGAAAGGCAATCGAAAATGCGGTTACATCGGAGAGAAAGGAATCGGTT 955
Query 992 TCAAGAGTGTG-TTCTTGATTACCTCACAGCCCTATATTTTCAGCAATGGCTATCAGATT 1050
||||||||||| ||| ||||||| || ||||| ||||| |||||||||||||||||||||
Sbjct 956 TCAAGAGTGTGTTTC-TGATTACGTCGCAGCCTTATATCTTCAGCAATGGCTATCAGATT 1014
Query 1051 CGCTTCAATGAGGCACCTTGCAGCCACTGCAGCCTTGGCTACATTGTTCCTGAGTGGGTT 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1015 CGCTTCAATGAGGCACCTTGCAGCCACTGCAGCCTTGGCTACATTGTTCCTGAGTGGGTT 1074
Query 1111 GAGCAACATCCTTCTCTTGGTGATATACAAAGGATGTACGGTTCGGGTTCTGCTCTTCCG 1170
|| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 1075 GACCAACATCCTTCTCTTGTTGATATACAAAGGATGTATGGTTCGGGTTCTGCTCTTCCG 1134
Query 1171 ACCACGACCATTATCTTGCCTTTGAAGTA-TGACAAAGTAAAGCCGGTGAAAGAACAGCT 1229
||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 1135 ACCACAACCATTATCTTGCCTTTGAAG-AGTGACAAAGTAAAGCCGGTGAAAGAACAGCT 1193
Query 1230 TTCCAATGTTCATCCTGAGGTTCTGTTGTTTCTCTCAAAGATCAAGCGTCTTTCTATCAG 1289
||||||||||||||||||||||||||||||| | ||||||||||| ||||| ||||||||
Sbjct 1194 TTCCAATGTTCATCCTGAGGTTCTGTTGTTTTTGTCAAAGATCAAACGTCTCTCTATCAG 1253
Query 1290 AGAACATTGCCTAGATGCAAAGCTCAGCACAGTGAACTCAATCGGGATTGTTAGTGAGAC 1349
|||||||||||||||| | |||||||| || ||||||||||| |||||||||||||||||
Sbjct 1254 AGAACATTGCCTAGATCCTAAGCTCAGTACTGTGAACTCAATAGGGATTGTTAGTGAGAC 1313
Query 1350 TAATTTTGTGACGAGGAAGAGCATTGATGCTGAGTCTTACACAATACATCTCTCAGCTTC 1409
||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct 1314 TAACTTTGTGACGAGGAAGAGCATTGATGCGGAGTCATACACGATACATCTCTCAGCTTC 1373
Query 1410 TGAGAAAGGGAAAAACTCTGAACAAGAATGCAGCTACTACATGTGGAAGCAAAAGTTTCC 1469
||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||
Sbjct 1374 TGAGAAAGGGAAAAACTCTGAACAAGAATGCTCCTACTATATGTGGAGGCAAAAGTTTCC 1433
Query 1470 TGTGAAACATGAGAACCGTGTGGACAGGAGAAGTGAAGTCGATGATTGGGTCATCACTTT 1529
|||||||||||||||||||||||||||||||| ||||| || || ||||| ||||||||
Sbjct 1434 AGTGAAACATGAGAACCGTGTGGACAGGAGAAGCGAAGTTGAGGAGTGGGTGATCACTTT 1493
Query 1530 GGCATTTCCATTTGGAGAGCGTCTTGGCCGA-GGAAATAGCTCTCCTGGTATCTATGCGT 1588
|| |||||||| |||||||||||||||| | ||||||| ||||||||||||||||||||
Sbjct 1494 AGCGTTTCCATTCGGAGAGCGTCTTGGCC-ATGGAAATAACTCTCCTGGTATCTATGCGT 1552
Query 1589 TTCTTCCCACAGAAATGGTAACAAACTTTCCCTTCATAATTCAGGCAGATTTTATCCTTG 1648
||||||||||||||||||||||||||||||||||||| ||||| || ||||| || || |
Sbjct 1553 TTCTTCCCACAGAAATGGTAACAAACTTTCCCTTCATCATTCAAGCCGATTTCATTCTAG 1612
Query 1649 CTTCGTCCAGGGAGACT-ATTCTATTGGATGATATATGGAACCAAGGGATTCTCAGCTGT 1707
| ||||| || || | | || || || |||||||||||||||||||||||||||| ||||
Sbjct 1613 CATCGTCTAGAGAAA-TGATCCTTTTAGATGATATATGGAACCAAGGGATTCTCAACTGT 1671
Query 1708 GTCCCTATAGCATTTTTGAATGCATTCACGACCTTGGTCAAAAAGACTGATGCTCCGGTG 1767
|| ||| ||||||||||||||||||||||| | |||||||||| |||||||||||| |||
Sbjct 1672 GTACCTCTAGCATTTTTGAATGCATTCACGTCTTTGGTCAAAACGACTGATGCTCCAGTG 1731
Query 1768 TCTAGCGTCCTCCCTGCTTTTAGGTTCTTGCCTGTAAAAGAATCTAATTATGCAAAGCTG 1827
||||| | || ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1732 TCTAGTTTGCTGCCTGCTTTTAGGTTCTTGCCTGTAAAAGAATCTAACTATGCAAAGCTG 1791
Query 1828 AATGTGGTGCGAGAATCTATCAAGGCAAGGGTTTGTGCAGAGGAAATTGTGCCAAGCATA 1887
|||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 1792 AATGTGGTCCGAGAATCTATCAGGGCAAGGGTTTGTGCAGAGGAAATTGTACCAAGCATA 1851
Query 1888 TCTCATTTAGGACAGAAGTTCTTCCACAAGCCGTGTGAAGTTGGTCGTCTCATACCTACA 1947
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1852 TCTCATCAAGGACAGAAGTTCTTTTACAAGCCGTGTGAAGTTGGTCGTCTCATACCTACT 1911
Query 1948 TTCTGGGACATCTTGGAGAAAGCAAGAAGTGAAGGTGCAAG-CTTGCAGAATATATCATC 2006
|||||||||||||| ||||||||| ||||||||||||| || || |||||| ||||||||
Sbjct 1912 TTCTGGGACATCTTAGAGAAAGCAGGAAGTGAAGGTGCGAGTCT-GCAGAACATATCATC 1970
Query 2007 TCATGGGATCTACATTTTGAATTCCGCGTTTGACAGAACCGAATATGACAACGTTCTGAA 2066
||||| |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||
Sbjct 1971 ACATGGCATCTACATTTTGAATTCCGCTTTTGACAGAACAGAATATGACAACGTTTTGAA 2030
Query 2067 CTTCTTGGGTCTAAAGCAAGTCAGCAACGAGTGGTATGTAAAATGCATGCAGGGCTGTTA 2126
|||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||| |
Sbjct 2031 CTTCTTGGGTCTGAAGCAAGTAAGCAACGAATGGTATGTAAAATGCATTCAGGGCTGTGA 2090
Query 2127 TCTCGTGGCAAGTGTGTCAGAAGGTACGTATATGGAGGTTCTACTCTTCATCGCTGAGAA 2186
||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 2091 TCTCGTGACAAGTGTGTCAGAAGCTACGTATGTGGAGGTTCTACTCTTCATCGCTGAGAA 2150
Query 2187 TTGGCAGT-CTAGGTTTCAGAGTACTAATATGGGGAAAGTTCCTCTTATCAAGTATGTTG 2245
|||||||| | |||||||||| ||| ||||||||||||||||| ||||||||||||||||
Sbjct 2151 TTGGCAGTGC-AGGTTTCAGAATACAAATATGGGGAAAGTTCCCCTTATCAAGTATGTTG 2209
Query 2246 TCCAGAAGGGAGTGAGTTCTCTTAGCAGTTTGGGTGATTTCAGTCCTCGGACACTATGCT 2305
|||| ||||||||||||||||| ||||||||||||| |||||||||| |||| ||||||
Sbjct 2210 TCCAAAAGGGAGTGAGTTCTCTCAGCAGTTTGGGTGGTTTCAGTCCTAGGACTTTATGCT 2269
Query 2306 TGTCCACTGAGAAGAACCAGGCATGGCTACTTGATTGGAGTGATGAGTTCAGATGCATGT 2365
||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 2270 TGTCCACAGAGAAGAACCAGGCATGGCTACTTGATTGGAACGATGAGTTCAGATGTATGT 2329
Query 2366 CTAAGTTTGTTTTCATGCCACCAACAACCCGGACAGCGTTGAAAGCGTGCTCCAAGAAAG 2425
|||| || || |||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 2330 CTAACTTCGTCTTCATGCCACCAACAACCCGGACAGCGTTGAAAGTGTGCTCCAAGAAGG 2389
Query 2426 AGACAATACACAATTGGTTGAAAGAGAACCTTAAAGTCACCAATCTTAGTGTCTCTGACT 2485
||| ||| || | |||| | ||||||||| ||||||||| | |||||||||||||||||
Sbjct 2390 AGATAATTCATACTTGGCTCAAAGAGAACGTTAAAGTCATTACTCTTAGTGTCTCTGACT 2449
Query 2486 ATGCAAAACGTCTCGGGGAGAATCTTAATGGAGATAAGAGGCTTGTAGTTGCATATGCAC 2545
||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2450 ATGCAAAACATCTCCGTGAGAATCTTAATGGAGATAAGAGGCTTGTTGTTGCATATGCAC 2509
Query 2546 ACTTTTTGCATCACTCTATCTCAAAAGAGGTTTTATCAGAAGAAGAAGCTGGTAAATGCT 2605
||||| |||||||||| |||||||| || |||||||| |||||||||| ||||||||||
Sbjct 2510 ACTTTCTGCATCACTCAATCTCAAAGGATTTTTTATCAAAAGAAGAAGCGGGTAAATGCT 2569
Query 2606 GCAAAGACATGCCGCTTGTGGACAACTATAGTAATGTCAACACAAGCAGGAGTGGGGTTC 2665
||||||||||||||||||||||||||||| | ||||| |||| |||||||| ||||||||
Sbjct 2570 GCAAAGACATGCCGCTTGTGGACAACTATGGGAATGTAAACATAAGCAGGAATGGGGTTC 2629
Query 2666 TTGTTCCAGCTAGTGCAGGTAAATGGGTTAGCTTAGTTGGTTCTAACCCGTGGAGACATA 2725
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 2630 TTGTTCCAGCTAGTGCAGGTAAATGGGTTAGCTTAGTTGGTTCCAATCCGTGGAGACATA 2689
Query 2726 GTGGCTATATTGAACTTTCAGAAGAGTATTTGTCGTCCAACAGGTTTGCTGGTCTTCGGT 2785
||||||| ||||||||||||||||||||||||| ||| |||||||| |||||||||||||
Sbjct 2690 GTGGCTACATTGAACTTTCAGAAGAGTATTTGTTGTCGAACAGGTTCGCTGGTCTTCGGT 2749
Query 2786 CTAACAAGAAAGACCTTCTCGTGTTCTTGAAATCTTATGTTAAGGCTGGAGATATACCTG 2845
||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||
Sbjct 2750 CTAACAAGAAAGACCTTCTCGGGTTCTTGAAATCTTCTGTTGAGGCTGGAGATATACCTG 2809
Query 2846 ACATAGAACCTCCAAATGCTGCTATACCTGCGTTGTCCGGGGCTCTTAAAAAGGAGAATG 2905
||||||||||||| |||| |||||||||||| ||||| ||| |||||| |||||||||||
Sbjct 2810 ACATAGAACCTCCTAATGTTGCTATACCTGCATTGTCAGGGCCTCTTACAAAGGAGAATG 2869
Query 2906 tttttttGCTGTTGGATTGGATTAA-A--TGTCATAGATATTCTCTTCGTTCCAACTTTT 2962
|||| |||||||| || |||||||| | ||| | ||| |||||||||||||||||||||
Sbjct 2870 TTTTGTTGCTGTTAGAGTGGATTAATAAGTGTAACAGACATTCTCTTCGTTCCAACTTTT 2929
Query 2963 TGCATTCTGTTAGAGGAGGCAGTTGGTTGAGAACAACAATGAATGGGATTTCTGATTATC 3022
|| |||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||
Sbjct 2930 TGAATTCTGTTAGAGGAGGAAGTTGGCTGAGAACAACAATGAATGGGGTTTCTGATTATC 2989
Query 3023 GGCCGCCTTCTCAGTCGTTTTATCATACTTCATCATGGGGAAGTATTCTGCAGAACGGAT 3082
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2990 GGCCGCCTTCTCAGTCGTTTTATCATACTTCATCATGGGGAAGTATTCTTCAGAACGGTT 3049
Query 3083 CAATTCTTGTTGATATTCCGCTGGTTGATCGAAGCTACTATGGGAAAGAGATTGACA-GC 3141
|||||||||||||||||||||| |||||||||||||||||||| || |||||||| | |
Sbjct 3050 CAATTCTTGTTGATATTCCGCTCGTTGATCGAAGCTACTATGGCAACGAGATTGAGAAG- 3108
Query 3142 TACAAAGAAGAGTTGAAAACTGCTGGTGTTATGTTTGAGTTCAGTGAAGCATGTACATTT 3201
||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||
Sbjct 3109 TACAAAGAAGAGTTGAAAATTGCTGGTGTCATGTTTGAGTTCAGTGAAGTATGTAGATTT 3168
Query 3202 GTTGGCAACCACCTAATGAGTTTAGCTGAGACTTCAACACTTTCAAGCGCAAACGTGTTC 3261
|||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 3169 GTTGGCAACCACCTGATGAGTTTAGCTGAGACGTCAACACAGTCAAGCGCAAACGTGTTC 3228
Query 3262 TCGATACTGAAATTCATTAGGTACTTAAGAGAGAAGCGCCTCCCACCAGCTGATTTCATC 3321
|| |||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||
Sbjct 3229 TCAATACTGAAATTCATCAGGTACTTGAGAGAGAAGCGCCTCTCACCAGCTGATTTCATC 3288
Query 3322 ACTGCAGTCAAAGATGGTCCTTGGCTGAAGACTAGTTCTGGTTACAAATCTCCAGATGGA 3381
||||| |||||| ||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 3289 ACTGCTGTCAAAAATGGTCCTTGGCTGAAGACTATTTCTGGTTACCGATCTCCAGATGGA 3348
Query 3382 GCTGTTTTGTTCAGCCAAGACTGGAAAGCTGCGTTGTTGATCAGCGATATTCCAATCATT 3441
||||||||||||||| | || ||||||||||||| ||||||||| || || ||| |||||
Sbjct 3349 GCTGTTTTGTTCAGCGAGGAATGGAAAGCTGCGTCGTTGATCAGTGACATCCCATTCATT 3408
Query 3442 GACAAAGATTTCTATGGTGAAGTTAGCCTCAATAGTTATAAGGAAGAACTTGAGTTGCTT 3501
|||| || ||||||||||| ||||||||||||| ||||||||||||| ||||||||||||
Sbjct 3409 GACAGAGGTTTCTATGGTGTAGTTAGCCTCAATGGTTATAAGGAAGAGCTTGAGTTGCTT 3468
Query 3502 GGCGTTGTAGTTAAGTTTCCTAATAACCACAGCCTCATCGTTTCTCATTTGAATACTGCA 3561
||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||
Sbjct 3469 GGCGTTGTAGTTAAGTTTCCTGATAACTACAGCCTCATCGTTTCACATTTGAATACTGCA 3528
Query 3562 AAGCTGACTTACTTGACACCCGATGCAATGTTCCTAGTACTTGACTGCATGCGTCAACTG 3621
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3529 AAGCTGACTTACTTGACACCTGATGCAATGTTCCTAGTACTTGACTGCATGCGTCAACTG 3588
Query 3622 AGTCCGCATAGGCTGATCAATGCCCTGAGGAATTCTTATCAATGCTTCAAGACAAAGAAG 3681
||||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||
Sbjct 3589 AGTCCACATAGGCTGATCAATGCCCTGTGGAATTCTTCTCAGTGCTTCAAGACAAAGAAG 3648
Query 3682 AATGGCTATAAATCTCCTGCTGAATGTTTCATACCTGATCCAGAGTGGAGTTGTCTTCTT 3741
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3649 AATGGCTATAAATCTCCTGCTGAATGTTTCATACCTGATCCAGAGTGGACTTGTCTTCTT 3708
Query 3742 TCTGTTTTTGATTGCTTTCCTGTGATCAATGATGATTTCTATGGAAGCAGAATATTTTCC 3801
||||||||||||||||| ||| ||||| |||||||||||||||| |||||||| ||| ||
Sbjct 3709 TCTGTTTTTGATTGCTTCCCTTTGATCGATGATGATTTCTATGGCAGCAGAATCTTTGCC 3768
Query 3802 TACAAAGAAGAACTGAAGCAGATTGGTGTTAAGCTTCAGCTTGAAGAAGCTGTGAAAGTG 3861
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3769 TACAAAGGAGAACTGAAGCAGATTGGTGTTAAGCTTCAGCTTGAAGAAGCTGTGAAAATG 3828
Query 3862 TTTGTCAGCACATTCAAACAGAAAGCCACCTCCTCTGGGCTAACCCGATGTACCGCATTG 3921
||||| || ||||| ||||||||||| | ||||||||||||||| ||||||||||||| |
Sbjct 3829 TTTGTGAGTACATTTAAACAGAAAGCTATCTCCTCTGGGCTAACACGATGTACCGCATCG 3888
Query 3922 TCTCTTTTATCTTGCTACAGGAAGCTGATGGGAAGTA-GTTACAGATTTCCTGATGAACT 3980
||||||||||||||||||| |||||||||||||||| || ||| || |||||| |||||
Sbjct 3889 TCTCTTTTATCTTGCTACAAGAAGCTGATGGGAAGTTTGT-ACAAATATCCTGAAGAACT 3947
Query 3981 TATGAAAAGCTTCAAAGAGTTTCAATGGCTGCATACCAAACTTGGCGATTTCCGAGCACC 4040
|||||||||||||||| |||||||||||||||||||||||||||| ||||| || |||||
Sbjct 3948 TATGAAAAGCTTCAAACAGTTTCAATGGCTGCATACCAAACTTGGTGATTTTCGTGCACC 4007
Query 4041 AAAGGACTGCATTCTCTTTGATTCAGACTGGGAACCCCTCCGCCTCATAGCGAATCTTCC 4100
||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 4008 AAAGGACTGTATTCTCTTTGATTCAGAATGGGAACCTCTCCGCCTCATAGCGAATCTTCC 4067
Query 4101 CTTTATCGATGATGGTCCAAACTGGTATGGTAAGAGCATACATGAATTCAAAAAAGAGCT 4160
|||||||||||||||||| ||||||||||| ||||||||||| || |||| |||||||||
Sbjct 4068 CTTTATCGATGATGGTCCGAACTGGTATGGCAAGAGCATACACGAGTTCAGAAAAGAGCT 4127
Query 4161 CGAGAGCTTGGGAGTTACAGTTGAGCTGAGGAATGGCATGAGCCATGTGATTAGCTCCCT 4220
|||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| |
Sbjct 4128 CGAGAGTTTGGGAGTTACAGTTGAGCTGAGGAAAGGCATGAGCCATGTGATCAGCTCCTT 4187
Query 4221 AAGTCTCCCTGATCCATCTCGCATCGCTCCTTCAAGCGCCCTGTCTCTTTTGAAGTGCAT 4280
|||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||
Sbjct 4188 AAGTCTCCCTGATCCATCTCGCATCGCTCCTTCAAGCGCCTTGTCTCTTTTTAGGTGCAT 4247
Query 4281 CACGTTCTTGCTTGAAGACAGATTTCAGCAACTTCCTACAGAGTTTCGTGATAAGGTTTC 4340
|| |||||||| ||||||||||||||||||||| |||| |||| ||| ||||||||| ||
Sbjct 4248 CAAGTTCTTGCGTGAAGACAGATTTCAGCAACTCCCTAAAGAGCTTCTTGATAAGGTCTC 4307
Query 4341 TGTGAAATGGTTGAAGACTCATGCTGGTTACCGCTGTCCCGAGGAGTGTCTCTTGTTTGA 4400
|| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||
Sbjct 4308 AGTAAAATGGTTGAAGACACATGCAGGTTACCGCAGTCCCGAGGAGTGTCTCTTGTTTGA 4367
Query 4401 TAGCAGCTGGAAGTTAGAGCCGTGTGATGGTCCGTTCATCGACGAAGAGTTTTATGGTTC 4460
||| | ||||||||||||||||||||||||||| |||||||||||||||| |||||| ||
Sbjct 4368 TAGGACCTGGAAGTTAGAGCCGTGTGATGGTCCCTTCATCGACGAAGAGTATTATGGCTC 4427
Query 4461 AGAGATTAAATCGTTTAAAGAAGAGCTTATTGCGATAGGAGTTGGTCATGATTCAGACAA 4520
||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 4428 AGATATTAATTCGTTTAGAGAAGAGCTTATTGCGATAGGAGTTGGTCATGATTCAGACAA 4487
Query 4521 AGCTTGCCAGTTGCTTGCAAGCAACGTCTATAAACTTTCAGAAACTGATGCTATTTCCCG 4580
||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct 4488 AGCTTGCCAGTTGCTTGCAAGAAATGTCTATAAACTCTCAGAAACTGATGCTATTTCCCG 4547
Query 4581 GGTTTATAGATTTCTCAGTGAAGCTGAATGGAAACCTGAGAGAGGTGCATCTTCAGGTCG 4640
||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 4548 GGTTTATAGATTTCTTAGTGAAGCTGAATGGAAACCTGAGAAAGGTGCCTCTTCAGGTCG 4607
Query 4641 AATTTGGATACCAAGTGATGAGAAATGGGCTGATGTTTCTAGTTGCGTGCTCTTTGACAA 4700
||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 4608 GATTTGGATACCAAGTGATGAGAAATGGGCTGATATTTCTAGTTGTGTGCTCTTTGACAA 4667
Query 4701 AGATAAGCTCTTTGGATCAAAGTTAAACGTTCTTGAAAACTACTATGGGAGTGGTAAGGA 4760
|||||||||||||||||||||||| ||||||||||||||| ||||| | |||||||||||
Sbjct 4668 AGATAAGCTCTTTGGATCAAAGTTTAACGTTCTTGAAAACCACTATTGTAGTGGTAAGGA 4727
Query 4761 TCATGACCTTCTTGGCTTCTTCTCATTTGCATTTGGCGTGAGAACCAACCCGTCTATTGA 4820
|||| |||||||||| |||||||||| ||||||||||||||||| || |||||||||||
Sbjct 4728 TCATAACCTTCTTGGTTTCTTCTCATCTGCATTTGGCGTGAGAATTAATCCGTCTATTGA 4787
Query 4821 AGATTACTGTGAGTTGTGGAAAGATTGGGAGAAAACGAAGAACAGATTGTCTAATGATGA 4880
||||||||| |||||||||||| ||||||||||||| |||||||||||||||| | ||||
Sbjct 4788 AGATTACTGCGAGTTGTGGAAATATTGGGAGAAAACTAAGAACAGATTGTCTAGTCATGA 4847
Query 4881 GTGTTGTGCGTTCTGGAGCTTTGTTGTCCGACACAGTGACACTATGAAAGCAGAGAAGCT 4940
||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 4848 GTGTTGTGCGTTCTGGAGCTTTGTTGTGCGACATGGTGACACGGTGAAAGCAGAGAAGCT 4907
Query 4941 CCTTTCTGAGTCCTTTTCGTGTTTGCCCGTAAAAGCACCAGATTGCAACAACAATGAAGG 5000
||| ||||||||||||||| ||||||| ||| | |||| |||||||||||||| || ||
Sbjct 4908 CCTCTCTGAGTCCTTTTCGCGTTTGCCTGTACACTCACCGGATTGCAACAACAACGACGG 4967
Query 5001 AGTCATGTTGTCTAACATCAGCGACGTTTTCATCGCTGATGACTTGCTCTTGAAAGACAT 5060
||||||||| |||| ||| |||||||| ||||| ||||||||||||||||||||||| ||
Sbjct 4968 AGTCATGTTATCTAGCATAAGCGACGTGTTCATAGCTGATGACTTGCTCTTGAAAGATAT 5027
Query 5061 GTTCATTGATTCTCATGTTTTCGTCTGGTATCCATCTCCAAGCATACCTACATTGTCCCG 5120
||| |||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||
Sbjct 5028 GTTTATTGATTCTCCTGTTTTCGTTTGGTATCCAACTCCAAGCATTCCTACATTGTCCCG 5087
Query 5121 AACCAGGCTTATTGAGCTTTATCGAAGA-ATCGGTGTCAAAGAGGTCTCCAAATGCGTGG 5179
|||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||| |
Sbjct 5088 AACCAGACTTATTGAGATTTATCGAA-ACATCGGTGTCAAAGAGGTCTCCAAATGCGTCG 5146
Query 5180 AGATCGCAGAAGCTGACCTAACCGGAGTCAAAGTCGAGCAGCAAGAGGTCGTCGATCCAA 5239
|||||||||||||||| ||||||||| ||||| ||||| ||||||||| || |||||||
Sbjct 5147 AGATCGCAGAAGCTGATCTAACCGGATTCAAAACCGAGCTGCAAGAGGTTGTTGATCCAA 5206
Query 5240 AGAATAACCTGATCGGACCGGGGCTAGTGAATCTCATTCTCGGGTTCCTCTCTGATCCGT 5299
|||| |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| |
Sbjct 5207 AGAAGAACCTGATTGGACCGGGGCTAGTGAAGCTCATTCTCGCGTTCCTCTCTGATCCAT 5266
Query 5300 CTCTCAAGGTAGAAGCTGCTGAACGTTTAAGAATCATACATAGCCTTGTTGACCTCGACG 5359
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 5267 CTCTCAAGGTAGAAACTGCTGAACGTTTAAGAATCATACATAGCCTTGTTGACATCGACG 5326
Query 5360 TTATAGAAACATCGGAGACAATCACAACAGAGTATACTCTGGATT-TACCGTCAAAGGGA 5418
||| |||||| |||||||| |||||||| |||||||||||| | | |||| |||||||||
Sbjct 5327 TTAAAGAAACTTCGGAGACTATCACAACGGAGTATACTCTG-AGTCTACCTTCAAAGGGA 5385
Query 5419 GAGAAGCTGATAGCAAAAGCTAAGAGGATGATAAGATGGGAGAGAGAGAAAGGAGTGGTT 5478
||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct 5386 GAGAAGCTGATTGCAAAGGCTAAGAGGATGATAAGATGGGAAAGGGAGAAAGGAGTGGTT 5445
Query 5479 TATGCAGAGAAGATGGAGAAAACTTGTGGTAAAAGAAAGCTTTTGGAGTATGCCACGTGT 5538
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 5446 TATGCAGAGAAGATGGAGAAAACTTGTGGTAAAAGAAAGCTTTTGGAGTACGCCACGTGT 5505
Query 5539 TTCGCTGAGGTGATTGCTAAGGGTGTGATGTGGGAGAGAGAGGATCTGATTGGACGGTTA 5598
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 5506 TTCGCTGAGGTGATTGCTAAGGGTGTGATGTGGGAGAGAGAGGATCTGATCGGACGGTTA 5565
Query 5599 TCAGAGCTTGTGAAGATGGCTTACTTGGTGGAGTTTGATGAAGAGGCTTTAGAGTTTCTT 5658
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 5566 TCAGAGCTTGTGAAGATGGCTTACTTGGTTGAGTTTGATGAAGAGGCTTTAGAGTTTCTT 5625
Query 5659 ATGAAGTCCAAGAACCTTCAGGTTTATGAAGAAGATGAGAAACTTATCTCAGATGAATTC 5718
|||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct 5626 ATGAAGTCTAAGAACCTTCAGGTCTATGAAGAAGATGAGAAACTAATCTCAGATGAGTTC 5685
Query 5719 TCCCTCAAGTAACCTAAG 5736
|| |||||||| |||||
Sbjct 5686 TC--TCAAGTAAACTAAG 5701
Score = 226 bits (122), Expect = 2e-57
Identities = 141/150 (94%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 428 AGGTTCAACATTCCATGAGAAAATCATTGAAAGAAAACGAAGAGAAACTGAAGAAAATAA 487
||||||||||||| ||||||||||||||| |||||||| ||||||||| |||||||||||
Sbjct 242 AGGTTCAACATTCGATGAGAAAATCATTGGAAGAAAACAAAGAGAAACCGAAGAAAATAA 301
Query 488 TCGTTGTGGATCTTGATATGCAAGACGATGAAGTCCATGTTGGTCAAAGTTCTCATCAAT 547
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 302 TCGTTGTGGATCTTGATATGCAAGACGATGAAGTAAATGTTGGTCAAAGTTCTCATCAAT 361
Query 548 CATT-CAGTTCTTCAAATCGAAAAAGAAAG 576
| || ||||||||||| |||||||||||||
Sbjct 362 C-TTGCAGTTCTTCAAGTCGAAAAAGAAAG 390
Score = 206 bits (111), Expect = 3e-51
Identities = 139/152 (91%), Gaps = 4/152 (3%)
Strand=Plus/Plus
Query 280 AAGGTTCAACATTCGATGAGAAAATCATTGGAAGAAAACGAAGAGAAA-TCGAAGAAAAT 338
||||||||||||||||||||||||||||||||||||| |||||||||| | |||| ||||
Sbjct 388 AAGGTTCAACATTCGATGAGAAAATCATTGGAAGAAACCGAAGAGAAACT-GAAGCAAAT 446
Query 339 AATCATTGTGGATCTTGATATGCAAGACGATGAAGTAAAGGTTGGTCAAAGTTCTCATCA 398
||| |||| |||||||||||||||||| |||||||||| |||||||||||||||| |||
Sbjct 447 AATTGTTGTTGATCTTGATATGCAAGACAATGAAGTAAATGTTGGTCAAAGTTCTCTTCA 506
Query 399 ATC-TTGCAGTTCTTCAAGTCGAAAAAGAAAG 429
||| || ||||||||||| |||||||||||||
Sbjct 507 ATCATT-CAGTTCTTCAAATCGAAAAAGAAAG 537
> AT3G28020.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: DNA binding;ATP binding (TAIR:AT3G48770.1); Has 66
Blast hits to 55 proteins in 9 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). | chr3:10417906-10419149
REVERSE LENGTH=741
Length=741
Score = 189 bits (102), Expect = 3e-46
Identities = 151/174 (87%), Gaps = 6/174 (3%)
Strand=Plus/Plus
Query 1078 TGCAGCCTTGGCTACATTGTTCCTGAGTGGGTTGAGCAACATCCTTCTCTTGGT-GATAT 1136
|||| ||||||||||||||||||||||||||||||| ||| ||||||||| ||| |||||
Sbjct 109 TGCAACCTTGGCTACATTGTTCCTGAGTGGGTTGAGAAACGTCCTTCTCT-GGTCGATAT 167
Query 1137 ACAAAGGATGTAC-GGTTCGGGTTCTGCTCTTCCGACCACGACCATTATCTTGCCTTTGA 1195
|||| ||| || |||| ||||||||| |||||||||| || || ||| |||||||||
Sbjct 168 TCAAAAGAT-TAATGGTTTTGGTTCTGCTATTCCGACCACAACAATAATCATGCCTTTGA 226
Query 1196 AGTA-TGACAAAGTAAAGCCGGTGAAAGAACAGCTTTCCAATGTTCATCCTGAG 1248
| | ||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct 227 AA-AGTGACAAAGTAAAGCCAGTGAAAGAACAACTCTCCAATGTTCATCCTGAG 279
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 286862977202
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5