BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937812
Length=1200
Score E
Sequences producing significant alignments: (Bits) Value
AT5G51250.1 | Symbols: | Galactose oxidase/kelch repeat superf... 496 3e-139
AT3G49832.1 | Symbols: | pseudogene of kelch repeat-containing... 455 5e-127
AT4G25710.1 | Symbols: | Galactose oxidase/kelch repeat superf... 370 2e-101
AT3G08810.1 | Symbols: | Galactose oxidase/kelch repeat superf... 329 3e-89
AT3G09915.1 | Symbols: | pseudogene, hypothetical protein | ch... 233 2e-60
AT5G38670.1 | Symbols: | Galactose oxidase/kelch repeat superf... 224 1e-57
AT4G39560.1 | Symbols: | Galactose oxidase/kelch repeat superf... 150 3e-35
AT1G19930.1 | Symbols: | Galactose oxidase/kelch repeat superf... 141 2e-32
> AT5G51250.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr5:20830743-20831849 FORWARD LENGTH=1107
Length=1107
Score = 496 bits (268), Expect = 3e-139
Identities = 860/1125 (76%), Gaps = 123/1125 (11%)
Strand=Plus/Plus
Query 74 TCGTCACTTCCCGATGATTTGATATTGAG-TTGTGTGGCACGGGTCTCAAGATTGTACTA 132
||||||||||||||||||||| ||||||| | | | ||||| ||||||||||||||||
Sbjct 4 TCGTCACTTCCCGATGATTTGCTATTGAGCATCT-TCGCACGCATCTCAAGATTGTACTA 62
Query 133 TCCGACTCTCTCTCTCGTCTCCAAGAGCTTTCGATCACTCCTGGCTTCACCGGAGCTTTA 192
||||||||||||||| |||||||||||||| ||||| || || ||||||||||| |||||
Sbjct 63 TCCGACTCTCTCTCTTGTCTCCAAGAGCTTCCGATCTCTACTAGCTTCACCGGACCTTTA 122
Query 193 CAAGGCTAGATCACTCTTGGGACGCACGGAGAGTTGTCTCTATGTTTGCTTA-AGGTTGA 251
||| || |||||||||| || | ||| |||||||||||||| || ||||| | ||||
Sbjct 123 CAAAGCCCGATCACTCTTAGGCCACACTGAGAGTTGTCTCTACGTGTGCTTTCATTTTGA 182
Query 252 --CA--CCTTTTAAAAGCA-ATAGCTGGTTCACCCTCTGCCGGAAACCTCATCA-AACCC 305
| || | || | || || |||||||| ||||| ||||||||| | | |||||
Sbjct 183 TTCTGGCCCT--AACA-CACAT---TGGTTCACTCTCTGTCGGAAACCTGA-CGGAACCC 235
Query 306 TAACCAGT-A-A---G-AAGAAAAAGAAGTCAAGTGGGTATGTTTTGGCAACAGTCCCAA 359
|||||| | | | | ||||| |||||||||| ||||||||||||||| || || ||||
Sbjct 236 TAACCAATGACACCAGTAAGAAGAAGAAGTCAAATGGGTATGTTTTGGCTACTGTGCCAA 295
Query 360 TCCCCCATTCTCCTCGTGCGCACTTGTCAGGTCTCGTGGCTGTTGGTTCTGATATCTACA 419
| ||||||||||||| ||| |||| ||| |||||||||| |||||||||||||||||||
Sbjct 296 TTCCCCATTCTCCTCCTGCAAACTTTTCAAGTCTCGTGGCGGTTGGTTCTGATATCTACA 355
Query 420 ACATTGGCGGATGCAGAAAAATCTACGAAACGCCGCCCTCCTCTAGCGTCTGGATTCTGG 479
||||||| |||| || | ||| || | || || || ||||| |||| ||||||||
Sbjct 356 ACATTGGTGGATCCATTTAC--CTAGGA--C-CCTCC-TCGTCTAGTGTCTCGATTCTGG 409
Query 480 ATTGC-ATGTCTCACACATGGCGCGAGGCTCCAAGCTTGCCGGTGGAGCCAATGAGACTT 538
||| | | |||||||| |||||||||||||||||||||| |||||||| ||| || |
Sbjct 410 ATTCCCA-GTCTCACATGTGGCGCGAGGCTCCAAGCTTGCGGGTGGAGCTGATGTCACAT 468
Query 539 TCTGCTAGCGTCCTTGATGGAAAGATATATGTAGCAGGAAG-TA-AA-GA-G----T--C 588
||||||||||||||||| |||||||||||||||||||||| || || || | | |
Sbjct 469 TCTGCTAGCGTCCTTGACAGAAAGATATATGTAGCAGGAAGCTACAAAGATGGCAATGGC 528
Query 589 ----C----T--TGGA-GAACTTGTTTGAGGTGTTTGACACAAAAACACAAACT-TGGGA 636
| | || | ||||||||| |||||||| ||||||||||||||| | ||| |
Sbjct 529 GATTCCAACTCCTGTAAGAACTTGTTCGAGGTGTTCGACACAAAAACACAAG-TGTGGCA 587
Query 637 TCCTGAGTCGTCTATCCCTTGCAGCAAGACAAAAGGCATCTTTTTATGGTCCAAAAGCAC 696
||||||| | | ||||| |||||||||||||||||||| |||||| ||||||||| |
Sbjct 588 TCCTGAGCC--C-ATCCCATGCAGCAAGACAAAAGGCAT-TTTTTAC--TCCAAAAGCGC 641
Query 697 ATGTATTGACGGAAAGCTCCACGTGGTGGCTGACAGGCATGGTGTGGTGAGTCCCATGGG 756
||||||||| |||||| | ||||||| | | ||| || || ||| ||
Sbjct 642 ATGTATTGATGGAAAGTTTCACGTGGAGAC-GACT--CACGG-------AGT-----GG- 685
Query 757 TGCTGTGATTGCTTACAATTGCAAGGAAGGTAGATGGGACATGGTTGA-ACAAAAC-ATG 814
|| | || |||||||| | | ||||||||||||||| || | | || || | |||
Sbjct 686 TG-T---AT-GCTTACAA--G---G-AAGGTAGATGGGACAAGGCT-ATACCAA-CGATG 732
Query 815 GAATGTTTTAAGTT-TTCC-AGTTCTCATTGCGAGATAGACAACGTCTTGTACTGTGTTC 872
|| | | || ||| | |||| |||||||||| | || || |||| || | |||
Sbjct 733 TT-TGGTATGAGGGCTTCATA-TTCTTTTTGCGAGATAAATAATGTTTTGTTCTATATTC 790
Query 873 TTCACGGAGCGATAAAATGGTATGACACTAAGGTAAGATTGTGGAGCAGGTTGAAGGGTT 932
|| ||||| | | | ||||||||| |||||| ||||| ||||||| | ||||| ||||
Sbjct 791 ATCGCGGAGTGTTCAGATGGTATGATACTAAGTTAAGAATGTGGAGAATATTGAAAGGTT 850
Query 933 TGGTAA-AGCTACCTAAGTTCT-CTCATGATGC-T-TGTAT-TAA-ATTGGCTGATTATG 986
|| || | ||||||| ||| | | | ||| | | ||| | | | ||||||||||||||
Sbjct 851 TGTTAGGA-CTACCTA-GTT-TAC-C-TGA-GAATATGTTTGTTAGATTGGCTGATTATG 904
Query 987 GTGGAAAGATAGCGGTTCTATGGGTCGATGAATCATC-TTATAGTGG--C-GG---CA-A 1038
|||||||||| |||||| |||||| || || || | || | |||| | || || |
Sbjct 905 GTGGAAAGATGGCGGTTTTATGGGAAGAGGA-TCGCCCTTCTTGTGGGGCTGGTGGCAGA 963
Query 1039 GAAGA-ATAA-GATTTGGTGTGCGGAGATTGCGCTTGAAAGACGACA-AAATTGTGAAAT 1095
|| || || | |||||||||||| | |||||||||| |||| | || ||||| | | |
Sbjct 964 GATGAGATGATGATTTGGTGTGCCGTGATTGCGCTTAAAAGGC-ACCTAAATTTT-AGTT 1021
Query 1096 TT-GGGGAGAAG-TTGAGTGGTTTGGTCATGTGCTTACCGTACCT 1138
|| ||||| ||| |||||||||||| |||||||||||| || |||
Sbjct 1022 TTTGGGGA-AAGGTTGAGTGGTTTGATCATGTGCTTACAGTCCCT 1065
> AT3G49832.1 | Symbols: | pseudogene of kelch repeat-containing
F-box family | chr3:18484001-18484495 FORWARD LENGTH=495
Length=495
Score = 455 bits (246), Expect = 5e-127
Identities = 365/421 (87%), Gaps = 14/421 (3%)
Strand=Plus/Plus
Query 790 ATGGGACATGGTTGAACAAAACATGGAATGTTTT-AAGTTTTCCAGTTCTCATTGCGAGA 848
||||||||||||||||||||| ||||||| |||| |||||||| ||||||||||| ||||
Sbjct 1 ATGGGACATGGTTGAACAAAAGATGGAAT-TTTTCAAGTTTTCGAGTTCTCATTGAGAGA 59
Query 849 TAGACAACGTCTTGTACTGTGTTCTTCACGGAGCGATAAAATGGTATGACACTAAGGTAA 908
|||||||||| |||||||||||| || |||||||||||| ||||||||||| |||||||
Sbjct 60 TAGACAACGTTTTGTACTGTGTTTTTGACGGAGCGATAAGATGGTATGACAAAAAGGTAA 119
Query 909 GATTGTGGAGCA-GGTTGAAGGG-T--TTGGTAAAGCTACCTAAGTTCTCTCATGATGCT 964
|||||||||| | | |||||||| | ||||||| ||||||||||||||| | | ||| |
Sbjct 120 GATTGTGGAG-ACGTTTGAAGGGTTAATTGGTAAGGCTACCTAAGTTCTCACCTAATGTT 178
Query 965 TGTATTAAATTGGCTGATTATGGTGGAAAGATAGCGGTTCTATGGGTCGATGAATCAT-C 1023
|||||| ||||||||||||||||||||||||| |||||| | |||||||| |||| | |
Sbjct 179 TGTATTCAATTGGCTGATTATGGTGGAAAGATGGCGGTTTTGTGGGTCGAACAATC-TCC 237
Query 1024 TTATAGT---GGCGGCAAGAAGAATAAGATTTGGTGTGCGGAGATTGCGCTTGAAAGACG 1080
|| |||| |||| | ||||||||||||||||| ||||||||||| ||||||| ||
Sbjct 238 TTGTAGTAACAACGGCTATAAGAATAAGATTTGGTGCGCGGAGATTGCTCTTGAAAAACA 297
Query 1081 ACAAAATTGTGAAATTTGGGGAGAAGTTGAGTGGTTTGGTCATGTGCTTACCGTACCTTC 1140
| ||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 298 AGAAAGTTGTGAAATTTGGGGAGAAGTTGAGTGGTTTGGTCATGTGCTTACAGTTCCTTC 357
Query 1141 AACATGCGTT-TTAGAGAAAGTTCTTGCTGTTACTGTTTGATCATGAATGAATGTGTCAC 1199
|||||| || || | || ||| |||||| ||||||||||| |||||||||||||||||
Sbjct 358 AACATGTTTTGTT-GCCAAGGTTATTGCTGCTACTGTTTGATGATGAATGAATGTGTCAC 416
Query 1200 A 1200
|
Sbjct 417 A 417
> AT4G25710.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr4:13098141-13099531 REVERSE LENGTH=1391
Length=1391
Score = 370 bits (200), Expect = 2e-101
Identities = 419/520 (81%), Gaps = 33/520 (6%)
Strand=Plus/Plus
Query 75 CGTCACTTCCCGATGATTTGATATTGAGTTGT-GTGGCACGGGTCTCAAGATTGTACTAT 133
|||||||||||||||||||| ||||| || | | ||||| ||||||| ||| ||||||
Sbjct 83 CGTCACTTCCCGATGATTTGGTATTG-GTCATCATCGCACGCGTCTCAATATTATACTAT 141
Query 134 CCGACTCTCTCTCTCGTCTCCAAGAGCTTTCGATCACTCCTGGCTTCACCGGAGCTTTAC 193
|| | |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 142 CCTATTCTCTCACTCGTCTCCAAGAGCTTTCGATCTCTCCTGGCTTCACCGGAGCTTTAC 201
Query 194 AAGG-CTAGATCACTCTTGGGACGCACGGAGAGTTGTCTCTATGTTTGCTTAAGGT-TG- 250
|||| | || ||||||||||| |||| ||||||| |||||||||| ||| ||| | ||
Sbjct 202 AAGGTC-AGGTCACTCTTGGGCCGCAGGGAGAGTCGTCTCTATGTGTGCATAAA-TATGT 259
Query 251 ACACCTTTTAAAA--G-CAATAGCTGGTTCACCCTCTGCCGGAAACCTCATCAAACC-CT 306
| | || ||||| | | ||||||||||||||||||||||||||| ||| ||| |
Sbjct 260 ATTC-TTATAAAAACGGCCCTAGCTGGTTCACCCTCTGCCGGAAACCGGATCGAACAAC- 317
Query 307 AACCAGTAAG-AAGAAA-A--AG-A-AG-TCAAGTGGGTATGTTTTGGCAACAGTCCCAA 359
|||||||| | || || | || | || |||||||| ||||| ||||||| | ||||||
Sbjct 318 AACCAGTA-GTAATAAGGAGGAGGACAGGTCAAGTGGTTATGTCTTGGCAAGAATCCCAA 376
Query 360 TCCCCCATTCTCCTCGTG-CGCACT--TGTCAGGTCTCGTGGCTGTTGGTTCTGATATCT 416
| |||||||||||| || | || | | || |||| ||| ||||||||| ||||||
Sbjct 377 TTCCCCATTCTCCTT-TGACTCAGAGATAT-AGC-CTCGCGGCGGTTGGTTCTAATATCT 433
Query 417 ACAACATTGGCGGATGCAGAAAAATCTACGAAACGCCGCCCTCCTCTAGCGTCTGGATTC 476
| |||||||||| | |||| | | || | | | | |||||||| |||||| |||
Sbjct 434 ATAACATTGGCGTAACCAGATAC--C-ACCATTTGAC-C--TCCTCTAGTGTCTGGGTTC 487
Query 477 TGGATTGCATGTCTCACACATGGCGCGAGGCTCCAAGCTTGCCGGTGGAGCCAATGAGAC 536
|||||||| ||||||||| |||||| |||||||||||||||||||||||| | | |||
Sbjct 488 TGGATTGCCGGTCTCACACGTGGCGCCAGGCTCCAAGCTTGCCGGTGGAGCTATTTAGAG 547
Query 537 TTTCTGCTAGCGTCCTTGATGGAAAGATATATGTAGCAGG 576
|||||| ||||||||||||| ||||||||||||||||||
Sbjct 548 TTTCTGTTAGCGTCCTTGATCAAAAGATATATGTAGCAGG 587
> AT3G08810.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr3:2675631-2676693 REVERSE LENGTH=1063
Length=1063
Score = 329 bits (178), Expect = 3e-89
Identities = 400/501 (80%), Gaps = 40/501 (8%)
Strand=Plus/Plus
Query 75 CGTCACTTCCCGATGATTTGATATTGAG-TTGTGTGGCACGGGTCTCAAGATTGTACTAT 133
||||||||||||||||| || ||||||| | | | ||||| ||||||||||||||||||
Sbjct 102 CGTCACTTCCCGATGATGTGCTATTGAGCATCT-TCGCACGCGTCTCAAGATTGTACTAT 160
Query 134 CCGACTCTCTCTCTCGTCTCCAAGAGCTTTCGATCACTCCTGGCTTCACCGGAGCTTTAC 193
||||||||||| | ||| ||| ||||||||||||| ||||| |||||||| |||||||||
Sbjct 161 CCGACTCTCTCACACGTATCCGAGAGCTTTCGATCTCTCCTAGCTTCACCAGAGCTTTAC 220
Query 194 AAGGCTAGATCACTCTTGGGACGCACGGAGAGT-TGTCTCTATGTTTGCTTAAGGTTGAC 252
|| || || ||||||| |||| ||| |||| | |||||||| || |||||| ||| | |
Sbjct 221 AAAGCCAGGTCACTCTCGGGAAACACCGAGA-TCTGTCTCTACGTGTGCTTACGGT-G-C 277
Query 253 ACCTTTTAAAAGCAATAGCTGGTTCACCCTCTGCCGGAAACCTCATCAAACCCTAACCAG 312
| | | | || ||||||| | |||| |||| |||||| ||||||||||||||
Sbjct 278 TC-TACTG---GTTATCGCTGGTTTAGCCTCAGCCGTAAACCTGATCAAACCCTAACC-- 331
Query 313 TAAGAAGAAAAAGAAGTCAAGTGGGTATGTTTTGGCAACAGTCCCAATCCCCCAT--T-C 369
|| || || | |||||||||||| |||| |||||| | ||||||||| ||| | | |
Sbjct 332 TATGAGGAGAG-GAAGTCAAGTGGTTATGCTTTGGCTAGAGTCCCAATTCCCGGTGGTTC 390
Query 370 TCCTCGTG--CGCA-CTT-GTCAGGTCTCGTGGCTGTTGGTTCTGATATCTACAACATTG 425
|||| || || | ||| | || ||||||||| ||||||||||||||||| ||||||
Sbjct 391 TCCTAATGTACG-ATCTTCG--AG-TCTCGTGGCGGTTGGTTCTGATATCTATAACATTT 446
Query 426 GCGGATGCAGAAAAATCTACGAAA-CG-CCGCCCTCCTCTAGCGTCTGGATTCTGGATTG 483
|||||| || || || ||| || || || ||||||||||||| |||||||||||
Sbjct 447 GCGGATCCA------TCAAC-AAAGCGTCCTCC-TCCTCTAGCGTCTCAATTCTGGATTG 498
Query 484 -CATGTCTCACACATGGCGCGAGGCTCCAAGCTTGCCGGTGGAGCCAA-TG-AGACTTTC 540
|| ||||||||| ||||| ||||||||||||||||||||||||| || | | | ||||
Sbjct 499 TCA-GTCTCACACGTGGCGGGAGGCTCCAAGCTTGCCGGTGGAGCTAAGTTCA-A-TTTC 555
Query 541 TGCTAGCGTCCTTGATGGAAA 561
||||||||||| |||||||||
Sbjct 556 TGCTAGCGTCCGTGATGGAAA 576
> AT3G09915.1 | Symbols: | pseudogene, hypothetical protein |
chr3:3039015-3040186 REVERSE LENGTH=1172
Length=1172
Score = 233 bits (126), Expect = 2e-60
Identities = 281/353 (80%), Gaps = 22/353 (6%)
Strand=Plus/Plus
Query 82 TCCCGATGATTTGATATT-GAGTTGTGTGGCACGGGTCTCAAGATTGTACTATCCGACTC 140
|||| |||||||| |||| || | | ||||| ||| |||||||||||||||||||||
Sbjct 88 TCCCTATGATTTGCTATTGGACAT-CATCGCACGCGTCCCAAGATTGTACTATCCGACTC 146
Query 141 TCTCTCTCGTCTCCAAGAGCTTTCGATCACTCCTGGCTTCACCGGAGCTTTACAAGGCTA 200
|||| ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct 147 TCTCACTCGTTTCCAAGAGCTTTCGATCCCTCCTAGCTTCACCGGAGCTTTACAAGGCCA 206
Query 201 G-A--TCACTCTTGGGACGCACGGAGAGTTGTCTCTATGTTTGCTTAAGGTTGACACCTT 257
| | ||| ||||||| | ||| ||| ||||||||||||| |||||| || || | |
Sbjct 207 GCAGGTCATTCTTGGGTCACACCGAGCGTTGTCTCTATGTGTGCTTACGG-TG----C-T 260
Query 258 TTAAAAGCAATAGCTGGTTCACCCTCTGCCGGAAACCTCATCAAACCCTAACCAGT-A-A 315
| | || ||||||||||||| || ||||| || ||||||||||| ||| | | |
Sbjct 261 GTCCTGGTTATCGCTGGTTCACCCTGTGTCGGAAGCCAGATCAAACCCTATCCAATGACA 320
Query 316 -GA-AGAAAAAGAAGTCAAGTGGGTATGTTTTGGCAACAGTCCCAATCCCCCA-TTCTCC 372
| | ||||||||||||||||||||||||||||||||||||| || || | || ||
Sbjct 321 CCACTG-AAAAGAAGTCAAGTGGGTATGTTTTGGCAACAGTCCCCATTCCT-AGTTTTCA 378
Query 373 TCGTGCGCACTTGTC-AGGTCTCGTGGCTG-TTGGTTCTGATATCTACAACAT 423
| ||| ||| || || |||||||| || ||||||||||||||||| ||||
Sbjct 379 TAAACCGCGCTTTTCGAG-TCTCGTGG-TGGTTGGTTCTGATATCTACTACAT 429
> AT5G38670.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr5:15475786-15476871 FORWARD LENGTH=876
Length=876
Score = 224 bits (121), Expect = 1e-57
Identities = 161/180 (89%), Gaps = 4/180 (2%)
Strand=Plus/Plus
Query 58 GCAATCG-ATCCTAATTTCGTCACTTCCCGATGATTTGATATTGAGTTGTGTGGCACGGG 116
|||| || | ||||| | |||||||||||||||||||||||||||| || || |||||||
Sbjct 9 GCAAACGAACCCTAA-TCCGTCACTTCCCGATGATTTGATATTGAGCTGCGTCGCACGGG 67
Query 117 TCTCAAGATTGTACTATCCGACTCTCTCTCTCGTCTCCAAGAGCTTTCGATCACTCCTGG 176
||||||||||||| |||||| ||||||| ||||||||||||||||||||||| ||| | |
Sbjct 68 TCTCAAGATTGTATTATCCGGCTCTCTCCCTCGTCTCCAAGAGCTTTCGATCTCTCATAG 127
Query 177 CTTCACCGGAGCTTTACAAGGCTAGATCACTCTTGGGAC-GCACGGAGAGTTGTCTCTAT 235
|||||||||||||||||||| | |||||||||||| || ||||||||||||||||||||
Sbjct 128 CTTCACCGGAGCTTTACAAGACCCGATCACTCTTGG-ACCGCACGGAGAGTTGTCTCTAT 186
Score = 150 bits (81), Expect = 3e-35
Identities = 202/257 (79%), Gaps = 22/257 (9%)
Strand=Plus/Plus
Query 890 TGGTATGACACTAAGGTAAGATTGTGGAGCAG-GTTGAAGGGTTTGGTAAAG-CTACCTA 947
|||||| ||| | ||| |||| |||||| || ||||||||| |||| | | ||||||
Sbjct 592 TGGTATCACAGTGAGGAAAGAGAGTGGAG-AGACTTGAAGGGTATGGT-AGGATTACCTA 649
Query 948 AGTTCTCTCA-TGATGCTTGTATTA-AATTGGCTGATTATGGTGGAAAGATAGCGGTTCT 1005
||||| || | |||||||||| ||| || ||| |||||||||||| ||||| || ||| |
Sbjct 650 AGTTCCCT-ATTGATGCTTGTCTTAGAA-TGGTTGATTATGGTGGGAAGATGGCAGTT-T 706
Query 1006 ATG-GGTCGATGAATCATCTTATAGT-GGCGGCAAGAAGAATAAGATTTGGTGTGCGGAG 1063
|| || || || | || || | |||| | | ||||| | ||||||||||||||||
Sbjct 707 -TGTGG--GACGACT-AT-TT-GCCTGGGCGCCGA-AAGAAGATGATTTGGTGTGCGGAG 759
Query 1064 ATTGCGCTTGAAAGACGACAAAA-TTGTG-AAATTTGGGGAGAAGTTGAGTGGTTTGGTC 1121
||||||||||||||||| | || || || |||| |||||| ||||||| ||||||| ||
Sbjct 760 ATTGCGCTTGAAAGACG-CGGAAGTT-TGGAAATATGGGGAAAAGTTGAATGGTTTGCTC 817
Query 1122 ATGTGCTTACCGTACCT 1138
|||||||||| || |||
Sbjct 818 ATGTGCTTACAGTCCCT 834
> AT4G39560.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr4:18382291-18383803 REVERSE LENGTH=1513
Length=1513
Score = 150 bits (81), Expect = 3e-35
Identities = 157/194 (81%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 53 ACGCAGCAATCGATCCTA-ATTTCGTCACTTCCCGATGATTTGATATTGAGTTGT-GTGG 110
|||| ||| |||| || | |||| |||||||| | ||||||| || | || | | | |
Sbjct 124 ACGCCGCATTCGA-CCCAGATTTTATCACTTCCTGTTGATTTGCTAATAAG-TATCCTCG 181
Query 111 CACGGGTCTCAAGATTGTACTATCCGACTCTCTCTCTCGTCTCCAAGAGCTTTCGATCAC 170
| || ||||| |||||| |||| || | |||||||||||||||||||||||||||||| |
Sbjct 182 CCCGCGTCTCGAGATTGGACTACCCAATTCTCTCTCTCGTCTCCAAGAGCTTTCGATCTC 241
Query 171 TCCTGGCTTCACCGGAGCTTTACAAGGCTAGATCACTCTTGGGACGCACGGAGAGTTGTC 230
|| | |||||||||||||||||| || || | |||||||| || ||||| ||||| ||||
Sbjct 242 TCATTGCTTCACCGGAGCTTTACGAGACTCGGTCACTCTTAGGCCGCACAGAGAGCTGTC 301
Query 231 TCTATGTTTGCTTA 244
||||| | ||||||
Sbjct 302 TCTATCTGTGCTTA 315
> AT1G19930.1 | Symbols: | Galactose oxidase/kelch repeat superfamily
protein | chr1:6917020-6918138 FORWARD LENGTH=1035
Length=1035
Score = 141 bits (76), Expect = 2e-32
Identities = 373/512 (73%), Gaps = 37/512 (7%)
Strand=Plus/Plus
Query 77 TCACTTCCCGATGATTTGATATTG-AGTTGTGTGGCACGGGTCTCAAGATTGTACTATCC 135
|||||||| |||||||| || || | | | | || || ||||| || ||| | |||||
Sbjct 37 TCACTTCCAAATGATTTGTTAGTGAACATCT-TAGCCCGTGTCTCGAGGTTGGATTATCC 95
Query 136 GACTCTCT-CTCTCGTCTCCAAGAGCTTTC-GATCACTCCTGGCTTCACCGGAGCTTTAC 193
| ||||| || | ||||||||| | |||| | || |||| ||| |||||||||||||
Sbjct 96 AATTCTCTCCT-TAGTCTCCAAGCG-TTTCAGCTCGGTCCTTACTTTACCGGAGCTTTAC 153
Query 194 AAGGCTAGATCACTCTTGGGACGCACGGAGAGTTGTCTCTATGTTTGCTTAAGGTTGACA 253
|| | | ||||| | || | || |||| |||||| ||||| |||||| || |
Sbjct 154 CAGACCCGGTCACTAGTAGGTCTTACCGAGAATTGTCTTTATGTGTGCTTACTGTCCTCT 213
Query 254 CCT-TTTA--AAAGCAATAGCTGGTTCACCCTCTGCCGGAAACCTCATCAAACCCTAACC 310
| | | | | | ||||||||||| || || |||| |||| || |||| ||
Sbjct 214 CGTGCTGACCGTATCCCTAGCTGGTTCAAGCTTTGTCGGAGACCT-AT-----CCTAGCC 267
Query 311 AGTAAGAAGAAAAAGAAGTCAAGTGGGTATGTTTTGGCAACAGTCCCAATCCCCCATTCT 370
||| | | | | |||||||||||||||||||||||||||| | ||||| || ||||||
Sbjct 268 AGT--G-ACACTAGGAAGTCAAGTGGGTATGTTTTGGCAACAATACCAATTCCACATTCT 324
Query 371 CCTCGTGCGCACTTGTCAGGTCTCGTGGCTGTTGGTTCTGATATCTACAACATTGGCGGA 430
|||| | |||| |||| |||||||||| ||||||||| ||||||| ||||||||||||
Sbjct 325 CCTCCTTTGCACAGGTCAAGTCTCGTGGCGGTTGGTTCTAATATCTATAACATTGGCGGA 384
Query 431 TGCAGAAAAATCTACGAAACGCC-GCCCTCCTCTAGCGTCTGGATTCTGGATTGCATG-T 488
| || ||| | || | || | || ||||| |||| || || || ||| || |
Sbjct 385 TCCA------TCTCCCAATC-CCAG---TCATCTAGTGTCTCAATCCTAGACTGC-TGGT 433
Query 489 CTCACACATGGCGCGA-GGCTCCAAGCTTGCCGGTGGAGCCAATGAG-ACTT-TCTGCTA 545
||||||| |||| ||| || ||||||| ||| |||||||| ||| || || || |
Sbjct 434 CTCACACGTGGCTCGAAGG-TCCAAGCATGCAGGTGGAGCGG--GAGTACCCATCAGCCA 490
Query 546 GCGTCCTTGATGGAAAGATATATGTAGCAGGA 577
| | ||||||||||||||||| ||| |||||
Sbjct 491 GTTTACTTGATGGAAAGATATACGTAACAGGA 522
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58935439830
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5