BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937818 Length=1439 Score E Sequences producing significant alignments: (Bits) Value AT3G49880.1 | Symbols: | glycosyl hydrolase family protein 43 ... 2211 0.0 > AT3G49880.1 | Symbols: | glycosyl hydrolase family protein 43 | chr3:18496249-18498713 FORWARD LENGTH=2066 Length=2066 Score = 2211 bits (1197), Expect = 0.0 Identities = 1361/1441 (94%), Gaps = 7/1441 (0%) Strand=Plus/Plus Query 1 GATAAATCTTTGG-AATAAAGATGAGGGTGATGAAGAATAAACACAACAAGAAAGCAACG 59 ||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 330 GATAAATCTTTGGAAACAAAGATGAGGGTGATGAAGAACAAACACAACAAGAAAGCAACG 389 Query 60 TTTTTACGTTGTTCACCGTTTGGTTTAGTATCTACAGTTGTGGGATGTGTTTTTATGATT 119 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 390 TTTTTGCGTTGTTCACCGTTTGGTTTAGTATCTACAGTTGTGGGATGTGTTTTCATGATT 449 Query 120 CATTTCACCATGTTATATAGCAGAAGATATAGTGTAGATCTTGAAGTTTCACCTCAGTTA 179 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 450 CATTTAACCATGTTATATAGCAGAAGTTATAGTGTAGATCTTGATCTTTCACCTCAGTTA 509 Query 180 CTTATCCATCATCCTATTGTCCGTGAGCTCGAACACGCTGAAGAAGAGAATATTCATATG 239 |||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||| Sbjct 510 CTTATCCATCATCCGATTGTCCGTGAGCTCGAACGCGTTGAAGAAGAGAATATCCATATG 569 Query 240 CCGCCTCCTAGAAAGCGTTCTCCGCGAGCTATCAAACGGAAACCAAAAATACCAACCACT 299 ||||||||||| ||||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 570 CCGCCTCCTAGGAAGCGTTCTCCTCGCGCTATCAAACGGAAACCAAAAACACCAACCACT 629 Query 300 TTAGTCGAAGAGTTTCTTGACGAGAATTCTCAGATTCGCCATCTGTTTTTCCCTGATATG 359 ||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct 630 TTAGTCGAAGAGTTTCTCGACGAGAATTCACAGATTCGACATCTTTTTTTCCCTGATATG 689 Query 360 AAATCAGCTTTTGGTCCTACCAAGG--G-TAATAATGATACATCACATTACTACTTCCCG 416 ||||||||||||||||||||||||| | || |||||| ||||| ||||||||||||||| Sbjct 690 AAATCAGCTTTTGGTCCTACCAAGGAAGATACTAATGACACATCGCATTACTACTTCCCG 749 Query 417 GGGAGAATTTGGACAGACACGGAAGGGAATCCGATTCAAGCACACGGTGGTGGCATTTTA 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 750 GGGAGAATTTGGACAGACACGGAAGGGAATCCGATTCAAGCACACGGTGGTGGCATTTTG 809 Query 477 TTTGATGAGATATCTAAGGTTTACTATTGGTATGGTGAATATAAAGATGGACCAACTTAT 536 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 810 TTTGATGACATATCAAAGGTTTACTATTGGTATGGTGAATATAAAGATGGACCAACTTAT 869 Query 537 CTTTCTCACAAGAAAGGTGCCGCTCGAGTTGATATAATCGGTGTTGGATGCTACTCGTCG 596 |||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| Sbjct 870 CTTTCTCACAAGAAAGGTGCTGCTAGAGTTGATATAATCGGTGTTGGATGTTACTCGTCG 929 Query 597 AAAGATTTATGGACATGGAAAAACGAAGGCGTTGTATTAGCAGCCGAAGAAACAGATGAG 656 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 930 AAAGATTTATGGACATGGAAAAACGAAGGTGTTGTATTAGCAGCCGAAGAAACAGATGAG 989 Query 657 ACACATGATTTACACAAATCCAATGTTCTAGAGCGCCCTAAAGTGATATACAATTCAGAA 716 |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 990 ACACATGACTTACACAAATCCAATGTTCTTGAGCGTCCTAAAGTGATATACAATTCAGAT 1049 Query 717 ACAAGTAAGTACGTGATGTGGATGCATATCGATGATGCAAACTACACGAAAGCTTCAGTT 776 ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| Sbjct 1050 ACAGGTAAGTACGTGATGTGGATGCATATCGACGATGCAAACTACACTAAAGCTTCGGTT 1109 Query 777 GGTGTAGCCATTAGCGATAACCCAACAGGTCCATTCGATTACTTATACAGCAGATCACCA 836 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1110 GGTGTAGCCATTAGCGATAACCCAACAGGTCCATTCGATTACTTATACAGCAGATCGCCA 1169 Query 837 CACGGGTTCGACAGTAGAGACATGACAGTCTACAAAGACGATGATAACATCGCCTACTTG 896 |||||||| || |||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 1170 CACGGGTTTGATAGTAGAGACATGACAGTCTACAAAGACGATGATAACGTAGCCTACTTG 1229 Query 897 ATATATTCATCAGAGGACAACAGCGTACTACATATCGGTCCTCTAACCGAGAATTACCTC 956 |||||||||||||||||||||||||| || ||||||||||| || ||||||||||||||| Sbjct 1230 ATATATTCATCAGAGGACAACAGCGTGCTGCATATCGGTCCCCTGACCGAGAATTACCTC 1289 Query 957 GATGTGAAGCCGGTGATGAAGAGAATCATGGTGGGACAACACAGAGAAGCTCCTGCTATT 1016 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1290 GATGTGAAGCCGGTAATGAAGAGAATCATGGTGGGACAACACAGAGAAGCTCCGGCTATC 1349 Query 1017 TTCAAACACCAAAACACTTACTACATGATCACTTCTGGTTGCACCGGATGGGCACCAAAC 1076 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1350 TTCAAACATCAAAACACTTACTACATGATCACGTCTGGTTGCACCGGATGGGCACCAAAC 1409 Query 1077 GAAGCTTTAGCTCATGCCGCTGAGTCGATAATGGGTCCATGGGAGACATTAGGGAATCCA 1136 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1410 GAAGCATTAGCTCATGCCGCTGAGTCGATAATGGGTCCGTGGGAGACATTAGGGAATCCA 1469 Query 1137 TGTGTTGGCGGGAACAATATTTTCCGGTCAACAACGTTTTTCGCGCAGAGCACATTCGTG 1196 |||||||||||||||| ||||||||| || || |||||||||||||||||||| |||||| Sbjct 1470 TGTGTTGGCGGGAACAGTATTTTCCGTTCGACGACGTTTTTCGCGCAGAGCACGTTCGTG 1529 Query 1197 ATACCATTACCAGGTGTTCCCGGTGTGTATATATTTATGGCGGATAGGTGGAATCCGGCG 1256 || || |||||||||||||| ||||||| |||||||||||| |||||||||||||||||| Sbjct 1530 ATTCCGTTACCAGGTGTTCCTGGTGTGTTTATATTTATGGCCGATAGGTGGAATCCGGCG 1589 Query 1257 GATTTGAGAGATTCGAGATATTTATGGTTACCGTTGATAGTTGGTGGACCGGCTGATAGG 1316 |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 1590 GATTTGCGAGATTCGAGATATTTGTGGTTACCGTTGATAGTTGGTGGACCGGCTGATCGT 1649 Query 1317 CCTCTTGAGTATAATTTCGGGTTTCCAATGTGGTCGAGAGTGTCTGTATATTGGCATAGA 1376 ||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 1650 CCTCTTGAGTATAGTTTCGGGTTTCCGATGTGGTCGAGAGTTTCTGTATATTGGCATAGA 1709 Query 1377 CAATGGCGGTTGCCTTCAGCAAGTGAGAAGAAGATTGCTTA-A-AAAA-GACTAAGCTTT 1433 ||||||||||||||||||||||| ||||||||||||||||| | |||| ||| ||||||| Sbjct 1710 CAATGGCGGTTGCCTTCAGCAAGAGAGAAGAAGATTGCTTAGAGAAAAAGACAAAGCTTT 1769 Query 1434 T 1434 | Sbjct 1770 T 1770 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70933370085 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5