BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg938123 Length=798 Score E Sequences producing significant alignments: (Bits) Value AT3G52440.1 | Symbols: | Dof-type zinc finger DNA-binding fami... 1110 0.0 AT5G65590.1 | Symbols: | Dof-type zinc finger DNA-binding fami... 69.4 5e-11 > AT3G52440.1 | Symbols: | Dof-type zinc finger DNA-binding family protein | chr3:19435447-19436190 FORWARD LENGTH=744 Length=744 Score = 1110 bits (601), Expect = 0.0 Identities = 704/753 (93%), Gaps = 9/753 (1%) Strand=Plus/Plus Query 24 atggagagagcagagGCCTTGACGTCATCGTTTATATGGCGGCCAAACGCAAACGCAAAC 83 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGAGAGAGCAGAGGCCTTGACATCATCGTTTATATGGCGGCCAAACGCAAACGCAAAC 60 Query 84 ACGGAGATAACGCCGAGTTGTCCAAGATGTGGATCCTCCAACACAAAGTTCTGTTACTAC 143 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 61 GCGGAGATCACGCCGAGTTGTCCAAGATGTGGATCCTCTAACACAAAGTTCTGTTACTAC 120 Query 144 AACAACTATAGCCTAACTCAGCCTCGCTACTTTTGCAAAGGCTGCCGCAGATATTGGACC 203 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 121 AACAACTATAGCCTCACTCAGCCTCGCTACTTCTGCAAAGGCTGCCGCAGATATTGGACC 180 Query 204 AAAGGTGGCTCCCTCCGCAATGTTCCTGTAGGTGGTGGCTGTCGCAAATCCCGCCGCCCC 263 |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 181 AAAGGTGGTTCCCTCCGCAATGTTCCTGTAGGCGGTGGCTGTCGAAAATCCCGCCGCCCC 240 Query 264 AAATCCTCCTCTGGTAACAACGCTAAAACCGGCCTAACCGCTAATTCTGGCAGCTCTGGT 323 ||||| || ||||||||||| ||||||| ||||||||||||||||||||| | | ||| Sbjct 241 AAATCATCTTCTGGTAACAATACTAAAACTAGCCTAACCGCTAATTCTGGCAACCCCGGT 300 Query 324 GGTGGTTCACCAAGTATAGATCTTGCTCTTGTTTACGCCAATTTCTTGAATCCAAAGACT 383 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| || Sbjct 301 GGTGGTTCACCAAGCATCGATCTTGCTCTTGTTTACGCCAATTTCTTGAATCCAAAGCCT 360 Query 384 GATGAATCTATACTACAAGAAAACTGCGATTTAGCTACAGTCACTACGGATTTTCTAGTT 443 || |||||||||||||||||||| ||||| |||| | ||||||||||||| | || Sbjct 361 GACGAATCTATACTACAAGAAAATTGCGACTTAG---C---CACTACGGATTTTTTGGTA 414 Query 444 GATAATCCTACTGGCACTTCCATGGACCCTTCATGGAGTATGGACATCAATGATGGTCAT 503 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 415 GATAATCCTACCGGCACTTCCATGGACCCTTCATGGAGTATGGACATCAATGATGG---T 471 Query 504 CATCATGATCATTACAATAATCAGGTGGAACACATTGTGGAGGAATGTGGTTATAATGGC 563 |||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 472 CATCATGATCATTATATTAATCCGGTGGAACACATTGTGGAGGAATGTGGTTATAATGGC 531 Query 564 TTGCCTCCATTTCCTGGTGAAGAGCTTCTCTCTTTAGACACTAATGGTGTTTGGTCTGAT 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 532 TTGCCTCCATTTCCTGGTGAAGAGCTTCTCTCTTTAGACACTAATGGTGTTTGGTCTGAT 591 Query 624 GCTTTGTTGATTGGCCATAACCACGTAGATGTTGGTGTGACTCCGGCTCAGGCTGTACAC 683 |||||||||||||| |||||||| ||||| ||||| |||||||||| ||||||||||||| Sbjct 592 GCTTTGTTGATTGGTCATAACCATGTAGACGTTGGCGTGACTCCGGTTCAGGCTGTACAC 651 Query 684 GACCCGGTGGTTCATTTCGCTGATGAATCCAATGATTCCACCAACCTCTTGTTTGGAAGT 743 || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 652 GAACCGGTGGTTCATTTCGCTGACGAATCCAATGATTCCACCAATCTCTTGTTTGGAAGT 711 Query 744 TGGAGCCCTTTTGATTTCACGGCCGATGGATGA 776 |||||||||||||||||||| |||||||||||| Sbjct 712 TGGAGCCCTTTTGATTTCACTGCCGATGGATGA 744 > AT5G65590.1 | Symbols: | Dof-type zinc finger DNA-binding family protein | chr5:26211746-26213136 REVERSE LENGTH=1391 Length=1391 Score = 69.4 bits (37), Expect = 5e-11 Identities = 57/66 (86%), Gaps = 3/66 (5%) Strand=Plus/Plus Query 119 CTCC-AACACAAAGTTCTGTTACTACAACAACTATAGCCTAACTCAGCCTCG-CTACTTT 176 |||| ||||||||||||||||||||||||||||| || || |||| ||||| | |||| Sbjct 245 CTCCAAACACAAAGTTCTGTTACTACAACAACTACAGTCTCTCTCAACCTCGTC-ACTTC 303 Query 177 TGCAAA 182 |||||| Sbjct 304 TGCAAA 309 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38830995631 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5