BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg938163 Length=261 Score E Sequences producing significant alignments: (Bits) Value AT3G52730.1 | Symbols: | ubiquinol-cytochrome C reductase UQCR... 416 5e-116 > AT3G52730.1 | Symbols: | ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein | chr3:19542931-19544264 REVERSE LENGTH=531 Length=531 Score = 416 bits (225), Expect = 5e-116 Identities = 250/262 (95%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 1 CTGAAAACAAACGATCAATCATGGATTACACTGCTCGGAGAAATCAGAAAGGCGCTTTCG 60 |||||||||| | |||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 78 CTGAAAACAACCAATCAATCATGGAGTACGCTGCTCGGAGAAATCAGAAAGGCGCTTTCG 137 Query 61 AAGGCTTTTACAAACTTATCATGCGCCGTAACTCCGTCTACGTCACTTTCATCATCGCCG 120 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 138 AAGGCTTTTACAAACTTATCATGCGCCGTAATTCCGTCTACGTCACTTTCATCATCGCCG 197 Query 121 GCGCATTTTTCGGCGAACGGGCTGTGGATTACGGTGTTCATAAGCTCTGGGAACGCAACA 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 198 GCGCATTTTTCGGTGAACGGGCTGTGGATTACGGTGTTCATAAGCTCTGGGAACGCAACA 257 Query 181 ATGTTGGGAAACGATATGAAGACATCTCTGTGTTGGGTCAAAGGCCAGTAGAAGAATGAG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 258 ATGTTGGGAAACGATATGAAGACATCTCTGTGTTGGGTCAAAGGCCAGTAGAGGAATGAG 317 Query 241 GATTTATCCTTTTTGAAT-CTC 261 ||| | |||||||||| ||| Sbjct 318 C-TTTCTTCTTTTTGAATTCTC 338 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11913456513 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5