BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938176
Length=1913
Score E
Sequences producing significant alignments: (Bits) Value
AT3G52850.1 | Symbols: VSR1, BP-80, ATELP, BP80, BP80B, ATELP1,... 3195 0.0
AT2G14740.1 | Symbols: ATVSR3, VSR3, VSR2;2, BP80-2;2 | vaculol... 584 9e-166
AT2G14720.1 | Symbols: VSR4, VSR2;1, BP80-2;1, MTV4 | vacuolar ... 540 2e-152
AT4G20110.2 | Symbols: VSR7 | VACUOLAR SORTING RECEPTOR 7 | chr... 213 5e-54
> AT3G52850.1 | Symbols: VSR1, BP-80, ATELP, BP80, BP80B, ATELP1,
ATVSR1, GFS1, VSR1;1, BP80-1;1 | vacuolar sorting receptor
homolog 1 | chr3:19587821-19591947 FORWARD LENGTH=2307
Length=2307
Score = 3195 bits (1730), Expect = 0.0
Identities = 1853/1914 (97%), Gaps = 2/1914 (0%)
Strand=Plus/Plus
Query 1 AAAGGAAGGAACTTTGGAATCATGAAGCTAGGGGTTTTCACTCTCTCGTTTCTTCTGATC 60
|||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 159 AAAGGAAGGAAC-TTGGAATCATGAAGCTTGGGCTTTTCACTCTCTCGTTTCTTCTGATC 217
Query 61 TTGAATCTAGCAATGGGTAGATTCGTTGTGGAGAAGAACAATCTCAAAGTTACATCACCT 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 218 TTGAATCTAGCAATGGGTAGATTCGTTGTTGAGAAGAACAATCTCAAAGTTACATCACCT 277
Query 121 GATTCGATCAAAGGTATTTACGAATGTGCCATTGGGAATTTCGGAGTTCCTCAATACGGT 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 278 GATTCGATCAAAGGTATTTACGAATGTGCCATTGGTAATTTCGGAGTTCCTCAATACGGT 337
Query 181 GGTACTTTAGTCGGCACCGTCGTGTATCCTAAATCCAATCAGAAAGCTTGTAAAAGCTAC 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 338 GGTACTTTAGTCGGCACCGTCGTCTATCCTAAATCCAATCAGAAAGCTTGTAAAAGCTAC 397
Query 241 AGCGATTTCGATATCTCCTTCAAATCTAAACCTGGACGATTACCCACTTTTGTCCTTATC 300
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 398 TCCGATTTCGATATCTCCTTCAAATCCAAACCTGGACGATTACCAACTTTTGTCCTTATC 457
Query 301 GATCGTGGAGATTGTTACTTCACTTTGAAAGCATGGATAGCTCAACAAGCTGGAGCAGCT 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 458 GATCGTGGAGATTGTTACTTCACTTTGAAAGCATGGATAGCTCAACAAGCTGGAGCAGCA 517
Query 361 GCGATTCTTGTAGCTGATAGTAAAGTTGAGCCATTGATTACAATGGATACACCTGAAGAA 420
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 518 GCGATACTTGTAGCTGATAGTAAAGCTGAGCCATTGATTACAATGGATACACCTGAAGAA 577
Query 421 GATAAATCTGATGCGGATTATCTTCAAAACATTACTATTCCTTCTGCTCTCATTACTAAA 480
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 578 GATAAATCTGATGCGGATTATCTTCAGAACATTACCATTCCTTCTGCTCTCATTACTAAA 637
Query 481 ACATTGGGAGACAGTATAAAGTCTGCGCTTTCCGGTGGTGACATGGTTAACATGAAGCTA 540
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 638 ACATTGGGAGACAGTATAAAGTCTGCTCTTTCCGGTGGTGATATGGTTAACATGAAGCTA 697
Query 541 GATTGGACTGAGTCGGTTCCTCATCCTGATGAGCGTGTAGAGTATGAACTGTGGACTAAT 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 698 GATTGGACTGAGTCGGTTCCACATCCTGATGAGCGTGTAGAGTATGAACTGTGGACTAAT 757
Query 601 AGCAATGATGAGTGTGGGAAGAAGTGTGATACTCAGATTGAGTTTCTCAAAAATTTCAAA 660
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 758 AGCAATGACGAGTGTGGGAAGAAGTGTGATACTCAGATTGAGTTTCTCAAGAATTTTAAA 817
Query 661 GGAGCTGCTCAGATTCTTGAGAAGGGTGGGCATACTCAGTTCACGCCACATTATATCACC 720
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 818 GGAGCTGCTCAGATTCTTGAGAAAGGTGGGCATACTCAGTTCACGCCACATTATATTACT 877
Query 721 TGGTACTGTCCTGAAGCTTTTACGCTGAGTAAACAGTGCAAGTCTCAGTGCATCAACCAT 780
||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||
Sbjct 878 TGGTACTGTCCTGAAGCGTTTACGTTGAGTAAACAGTGTAAGTCTCAGTGCATCAACCAT 937
Query 781 GGAAGGTACTGTGCGCCTGATCCTGAGCAGGATTTTACAAAAGGGTATGATGGAAAGGAT 840
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 938 GGAAGGTATTGTGCGCCTGATCCTGAGCAGGATTTTACGAAAGGGTATGATGGAAAGGAT 997
Query 841 GTTGTCGTTCAGAATCTACGCCAGGCTTGCGTCTACAGAGTGATGAATGAGAGCGGTAAG 900
||||| |||||||||||||| |||||||| |||||||||||||||||||| | |||||||
Sbjct 998 GTTGTTGTTCAGAATCTACGTCAGGCTTGTGTCTACAGAGTGATGAATGATACCGGTAAG 1057
Query 901 CCGTGGGTCTGGTGGGACTATGTGACTGACTTTGCCATCCGGTGTCCAATGAAGGAGAAG 960
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1058 CCGTGGGTCTGGTGGGACTATGTGACTGACTTTGCTATCCGGTGTCCAATGAAGGAGAAG 1117
Query 961 AAGTACACCAAGGAATGCGCAGATCAAATTATTAAGTCCCTTGGCATTGATCTCAAGAAG 1020
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 1118 AAGTACACCAAGGAATGCGCAGATGGAATTATTAAGTCCCTTGGCATTGATCTCAAAAAG 1177
Query 1021 GTGGACAAGTGTATTGGAGACCCTGAAGCAGATGTGGAGAACCCAGTTCTTAAAGCAGAG 1080
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1178 GTGGACAAGTGTATCGGAGACCCTGAAGCAGATGTGGAGAACCCAGTTCTTAAAGCAGAG 1237
Query 1081 CAGGAGTCCCAGATAGGCAAAGGTTCCCGTGGAGACGTGACTATACTCCCAACTCTTGTC 1140
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238 CAGGAGTCACAGATAGGCAAAGGTTCCCGTGGAGACGTGACTATACTCCCAACTCTTGTC 1297
Query 1141 GTGAACAACAGACAATACAGAGGTAAATTGGAAAAAGGGGCAGTACTTAAAGCTATGTGT 1200
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct 1298 GTGAACAACAGACAATACAGAGGTAAATTGGAAAAGGGGGCAGTGCTTAAGGCTATGTGT 1357
Query 1201 TCGGGTTTTCAAGAGTCAACAGAACCAGCTATCTGTCTTACTGAAGAGTTGGAAACTAAT 1260
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1358 TCGGGTTTTCAAGAGTCAACGGAACCAGCTATCTGTCTTACTGAAGATTTGGAAACTAAT 1417
Query 1261 GAATGTTTGGAAAACAACGGTGGATGCTGGCAAGACAAATCTGCCAACATTACTGCATGC 1320
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1418 GAATGTTTGGAAAACAACGGTGGATGCTGGCAAGACAAAGCTGCCAACATTACTGCATGC 1477
Query 1321 AGGGATACTTTTAGGGGAAGATTGTGTGAGTGCCCTACTGTTCAAGGTGTTAAATTTGTT 1380
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1478 AGGGATACTTTTAGGGGAAGATTGTGTGAGTGCCCTACTGTTCAAGGTGTTAAATTCGTT 1537
Query 1381 GGTGACGGTTACAGTCACTGCAAAGCCTCTGGAGTTTTGCATTGTGGTATCAACAATGGA 1440
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1538 GGTGACGGTTACACTCACTGCAAAGCCTCTGGAGCTTTGCATTGTGGTATCAACAATGGA 1597
Query 1441 GGATGCTGGAGAGAATCCCGAGGTGGCTTCACTTACTCTGCTTGCGTAGATGATCATTCA 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1598 GGATGCTGGAGAGAATCCCGAGGTGGCTTCACTTACTCTGCTTGCGTAGATGATCATTCA 1657
Query 1501 AAGGATTGCAAATGCCCACATGGGTTCAAGGGCGATGGAGTGAAGAACTGTGAAGATGTG 1560
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1658 AAGGATTGCAAATGCCCACTTGGGTTCAAGGGCGATGGAGTGAAGAACTGTGAAGATGTG 1717
Query 1561 GACGAGTGCAAAGAAAAAACGGTGTGCCAGTGCCCAGAGTGTAAATGTAAAAACACATGG 1620
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1718 GACGAGTGCAAAGAAAAAACGGTGTGCCAGTGCCCAGAGTGTAAATGTAAAAACACTTGG 1777
Query 1621 GGAAGTTATGAATGCAGTTGCAGCAATGGTTTGCTTTACATGCGTGAGCACGACACTTGC 1680
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1778 GGAAGTTATGAATGCAGCTGCAGCAACGGTTTGCTTTACATGCGTGAGCACGACACTTGC 1837
Query 1681 ATAGGTTCAGGCAAAGTTGGAACTACAAAACTCAGCTGGAGCTTTTTGTGGATTCTTATA 1740
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1838 ATAGGTTCAGGCAAAGTTGGAACCACAAAACTCAGCTGGAGCTTTTTGTGGATCCTTATA 1897
Query 1741 ATCGGAGTGGGTGTTGCAGGTCTTTCCGGATATGCAGTCTACAAATACAGAATCAGGAGT 1800
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1898 ATCGGGGTGGGTGTTGCAGGTCTTTCTGGATATGCAGTCTACAAATACAGAATCAGGAGT 1957
Query 1801 TACATGGATGCGGAAATTAGAGGGATCATGGCACAGTACATGCCTTTGGAAAGCCAACCA 1860
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 1958 TACATGGATGCGGAAATTAGAGGGATCATGGCACAGTACATGCCATTGGAAAGTCAACCA 2017
Query 1861 CCCAACACAAGTGGTCACCATATGGATATATGAGTGAAGCTATCAACACA-GCC 1913
||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 2018 CCCAACACAAGTGGTCACCATATGGATATATGAGTGAAGTTATCAACACAAGCC 2071
> AT2G14740.1 | Symbols: ATVSR3, VSR3, VSR2;2, BP80-2;2 | vaculolar
sorting receptor 3 | chr2:6308895-6312589 FORWARD LENGTH=2173
Length=2173
Score = 584 bits (316), Expect = 9e-166
Identities = 973/1286 (76%), Gaps = 62/1286 (5%)
Strand=Plus/Plus
Query 146 GTGCCATTGGGAATTTC-GGAGTTCCTCAATACGGTGGTACTTTAGTC-GGCACCGTCGT 203
|||| ||||| || ||| ||| |||||||||||||||| | | | | | || || || ||
Sbjct 140 GTGCAATTGGTAACTTCGGGA-TTCCTCAATACGGTGGAAGTAT-GGCTGGTACGGTGGT 197
Query 204 GTATCCTAAATCCAATCAGAAAGCTTGTAAAAG-CTACAGCGA-TT-TCGATATCTCCTT 260
||||| ||| ||||||||| | ||| || | | ||||| || ||||| | || ||
Sbjct 198 TTATCCGAAAGAGAATCAGAAATCGTGT-AAGGAATTTAGCGATTTCTCGAT-T-TCGTT 254
Query 261 CAAATCTAAACCTGGACG-ATTACCCACTTTTGTCCTTA-TCGATCGTGGAGATTGTTAC 318
||| ||| | ||||| | ||||| ||||| | |||| | |||||||||||||||| |
Sbjct 255 CAAGTCTCAGCCTGG-TGCTTTACCTACTTTCCT-CTTAGTTGATCGTGGAGATTGTTTC 312
Query 319 TTCACTTTGAAAGCATGGATA-GCTCA-ACAAGCTGGAGCAGCTGC-GATTCTTGTAGCT 375
||| ||||||| | ||||| | || || | |||| || || |||| | |||||||||||
Sbjct 313 TTCGCTTTGAAGGTATGGA-ACGCACAGA-AAGCAGGTGCTTCTGCTG-TTCTTGTAGCT 369
Query 376 GATAGTAAAGTTGAGCCATTGATTACAATGGATACACCTGAAGAAGATAAATCTGATGCG 435
|||| | | ||| || |||||||||||||||||||||||||||||| ||| |||
Sbjct 370 GATAATGTTGATGAACCTTTGATTACAATGGATACACCTGAAGAAGATGTTTCTTCTGCA 429
Query 436 GATTATCTTCAAAACATTACTATTCCTTCTGCTCTCATTACTAAAACATTGGGAGACA-G 494
| ||| || | || |||||||| ||||||||||| |||||||| || || || | |
Sbjct 430 AAGTATATTGAGAATATTACTATACCTTCTGCTCTTGTTACTAAAGGTTTTGGTGAAAAG 489
Query 495 TATAAAGTCTGCGCTTTCCGGTGGTGACATGGTTAACATGAAGCTAGATTGGACTGAGTC 554
| ||| || || || || || ||||||||| |||| || || |||| ||| |
Sbjct 490 C-TGAAGAAAGCTATTAGTGGAGGAGATATGGTTAACTTGAATCTTGACTGGAGAGAGGC 548
Query 555 GGTTCCTCATCCTGATGAGCGTGTAGAGTATGAACTGTGGACTAATAGCAATGATGAGTG 614
||||| ||||||||||| ||||| |||||||| ||||||||||||| |||||||| ||
Sbjct 549 TGTTCCGCATCCTGATGACCGTGTTGAGTATGAGTTGTGGACTAATAGTAATGATGAATG 608
Query 615 TGGGAAGAAGTGTGATAC-TCAGATTGAGTTTCTCAAAAATTTCAAAGGAGCTGCTCAGA 673
|||| |||||||||| | ||| |||||| | ||| |||| || ||||| || ||||
Sbjct 609 TGGGGTTAAGTGTGATATGTT-GATGGAGTTTGTGAAAGATTTTAAGGGAGCGGCGCAGA 667
Query 674 TTCTTGAGAAGGGTGGGCATACTCAGTTCACG-CCACATTATATCACCTGGTACTGTCCT 732
|||||||||| || ||| ||| ||||| | | || |||||||| || ||||| ||||||
Sbjct 668 TTCTTGAGAAAGGCGGGTTTACGCAGTTTA-GACCTCATTATATTACTTGGTATTGTCCT 726
Query 733 GAAGCTTTTACGCTGAGTAAACAGTGCAAGTCTCAGTGCATCAACCATGGAAGGTACTGT 792
| ||||| ||| ||||| |||||| ||||||||||| ||||| | ||||||||||||
Sbjct 727 CATGCTTTCACGTTGAGTCGACAGTGTAAGTCTCAGTGTATCAATAAAGGAAGGTACTGT 786
Query 793 GCGCCTGATCCTGAGCAGGATTTTA-CAAAAGGG-TATGATGGAAAGGATGTTGTCGTTC 850
|| |||||||| |||||||| |||| | ||| || |||||||| ||||| |||||
Sbjct 787 GCTCCTGATCCAGAGCAGGACTTTAGCTC--GGGATACGATGGAAAAGATGTGGTCGTGG 844
Query 851 AGAATCT--ACGCCAGGCTT-GCGTCTACAGAG-TGATGAATGAGAGCGGTAAGCCGTGG 906
| || || | | ||| ||| | || |||| || || |||||| | ||| || || |||
Sbjct 845 AAAA-CTTGA-GACAG-CTTTGTGTTTACA-AGGTGGCGAATGAAACCGGCAAACCTTGG 900
Query 907 GTCTGGTGGGACTATGTGACTGACTTTGCCA--TCCGGTGTCCAATGAAGGAGAAGAAGT 964
||||||||||| ||||| ||||| ||| ||| || | ||||| |||||||||||||| |
Sbjct 901 GTCTGGTGGGATTATGTTACTGA-TTT-CCAGATCAGATGTCCCATGAAGGAGAAGAAAT 958
Query 965 ACACCAAGGAATGCGCAGAT-CAAATTATTAAGTCCCTTGGCATTGATC-TCAAGAAGGT 1022
||| ||||| || || ||| | |||| || || ||||| |||||| | || || |
Sbjct 959 ACAATAAGGAGTGTGCTGATTCCG-TTATCAAATCTCTTGGAATTGATAGTAAAAAACTT 1017
Query 1023 GGACAAGTGTATTGGAGACCCTGAAGCAGA-TGTGGAGAACCCAGTTCTTAAAGCAGAGC 1081
| |||||||||| ||||||||||| || || | |||| || ||||||||||| | ||| |
Sbjct 1018 G-ACAAGTGTATGGGAGACCCTGATGCTGACT-TGGACAATCCAGTTCTTAAGGAAGAAC 1075
Query 1082 AGGAGTCC-CA-GATAGGCAAAGGTTCCCGTGGAGACGTGACTATACTCCCAACTCTTG- 1138
| || | | || | | ||||| ||||| | || || || || ||| | || || ||||
Sbjct 1076 AAGA-TGCTCAAGTT-GGCAAGGGTTCAAGGGGTGATGTTACCATATTGCCTAC-CTTGG 1132
Query 1139 TCGTGAACAACAGACAATACAGAGGTAAA-TTGGAAAA-AGGGGCAGTACTTAAAGCTAT 1196
| || ||||||||||| ||| |||| ||| ||||| || || | ||||||| || ||| |
Sbjct 1133 TTGTCAACAACAGACAGTACCGAGG-AAAGTTGGAGAAGAGTG-CAGTACTCAAGGCTTT 1190
Query 1197 GTGTTCGGGTTTTCAAGAGTCAACAGAACCAGCTATCTGTCTTA-CTGAAGA-GTTGGAA 1254
|| || |||||| | ||| | || |||||||| || || || | | | || || |||
Sbjct 1191 ATGCTCTGGTTTTGAGGAGACCACTGAACCAGCGATATGCCTCAGCACA-GATGT-GGAG 1248
Query 1255 ACTAATGAATGTTTGGAAAACAACGGTGGATGCTGGCAAGACAAATCTGCCAACATTACT 1314
| || || || || || ||||| ||||| || |||||||| ||||| |||||||| |||
Sbjct 1249 TCAAACGAGTGCTTAGATAACAATGGTGGTTGTTGGCAAGATAAATCAGCCAACATAACT 1308
Query 1315 GCATGCAGGGATACTTTTAGGGGAAGATTGTGTGAGTGCCCTACTGTTCAAGGTGTTAAA 1374
|| |||| |||||||||| | |||||| | || ||||| ||||| ||| | ||||| ||
Sbjct 1309 GCTTGCAAGGATACTTTTCGTGGAAGAGTATGCGAGTGTCCTACAGTTGATGGTGTGCAA 1368
Query 1375 TTTGTTGGTGACGGTTACAGTCACTG 1400
|| || || ||||||||||||||
Sbjct 1369 TTCAAAGGGGATGGTTACAGTCACTG 1394
> AT2G14720.1 | Symbols: VSR4, VSR2;1, BP80-2;1, MTV4 | vacuolar
sorting receptor 4 | chr2:6300488-6304359 REVERSE LENGTH=2480
Length=2480
Score = 540 bits (292), Expect = 2e-152
Identities = 945/1256 (75%), Gaps = 62/1256 (5%)
Strand=Plus/Plus
Query 146 GTGCCATTGGGAATTTC-GGAGTTCCTCAATACGGTGGTACTTTAGTC-GGCACCGTCGT 203
|||| ||||| || ||| ||| ||||||| |||||||| | | | | | || || || ||
Sbjct 343 GTGCAATTGGTAACTTCGGGA-TTCCTCAGTACGGTGGAAGTAT-GGCTGGTACGGTGGT 400
Query 204 GTATCCTAAATCCAATCAGAAAGCTTGTAAAAG-CTACAGCGA-TT-TCGATATCTCCTT 260
||||||||| ||||||||| | ||| || | | ||||| || ||||| | || ||
Sbjct 401 TTATCCTAAAGAGAATCAGAAATCGTGT-AAGGAATTTAGCGATTTCTCGAT-T-TCGTT 457
Query 261 CAAATCTAAACCTGGACG-ATTACCCACTTTTGTCCTTA-TCGATCGTGGAGATTGTTAC 318
||| ||| | ||||| | ||||| ||||| | |||| | |||||||||||||||| |
Sbjct 458 CAAGTCTCAGCCTGG-TGCTTTACCTACTTTCCT-CTTAGTTGATCGTGGAGATTGTTTC 515
Query 319 TTCACTTTGAAAGCATGGATA-GCTCA-ACAAGCTGGAGCAGCTGC-GATTCTTGTAGCT 375
||| ||||||| | ||||| | || || | |||| || || |||| | |||||||||||
Sbjct 516 TTCGCTTTGAAGGTATGGA-ACGCACAGA-AAGCAGGTGCTTCTGCTG-TTCTTGTAGCT 572
Query 376 GATAGTAAAGTTGAGCCATTGATTACAATGGATACACCTGAAGAAGATAAATCTGATGCG 435
|||| | | |||||| |||||||||||||||||||||||||||||| ||| |||
Sbjct 573 GATAATGTTGATGAGCCTTTGATTACAATGGATACACCTGAAGAAGATGTTTCTTCTGCA 632
Query 436 GATTATCTTCAA-AACATTACTATTCCTTCTGCTCTCATTACTAAAACATTGGGAGACA- 493
| ||| | | | || |||||||| ||||||||||| |||||||| || || || |
Sbjct 633 AAGTATAT-CGAGAATATTACTATACCTTCTGCTCTTGTTACTAAAGGTTTTGGTGAAAA 691
Query 494 GTATAAAGTCTGCGCTTTCCGGTGGTGACATGGTTAACATGAAGCTAGATTGGACTGAGT 553
| | ||| || || || ||||| ||||||||| |||| || || |||| |||
Sbjct 692 GC-TGAAGAAAGCTATTAGTGGAGGTGATATGGTTAACTTGAATCTTGACTGGAGAGAGG 750
Query 554 CGGTTCCTCATCCTGATGAGCGTGTAGAGTATGAACTGTGGACTAATAGCAATGATGAGT 613
| ||||| ||||||||||| ||||| |||||||| ||||||||||||| |||||||| |
Sbjct 751 CTGTTCCACATCCTGATGACCGTGTTGAGTATGAGTTGTGGACTAATAGTAATGATGAAT 810
Query 614 GTGGGAAGAAGTGTGATAC-TCAGATTGAGTTTCTCAAAAATTTCAAAGGAGCTGCTCAG 672
||||| |||||||||| | ||| |||||| | || |||| || ||||| || |||
Sbjct 811 GTGGGGTTAAGTGTGATATGTT-GATGGAGTTTGTGAAGGATTTTAAGGGAGCGGCGCAG 869
Query 673 ATTCTTGAGAAGGGTGGGCATACTCAGTTCACGCCACATTATATCACCTGGTACTGTCCT 732
||||||||||| || || ||| ||||| | ||| |||||||| || ||||| ||||||
Sbjct 870 ATTCTTGAGAAAGGCGGTTTTACGCAGTTTAGGCCTCATTATATTACTTGGTATTGTCCT 929
Query 733 GAAGCTTTTACGCTGAGTAAACAGTGCAAGTCTCAGTGCATCAACCATGGAAGGTACTGT 792
| ||||| ||| ||||| |||||| ||||||||||| ||||| | ||||||||||||
Sbjct 930 CATGCTTTCACGTTGAGTCGACAGTGTAAGTCTCAGTGTATCAATAAAGGAAGGTACTGT 989
Query 793 GCGCCTGATCCTGAGCAGGATTTTA-CAAAAGGG-TATGATGGAAAGGATGTTGTCGTTC 850
|| |||||||| |||||||| |||| | ||| || |||||||| || || || ||
Sbjct 990 GCTCCTGATCCAGAGCAGGACTTTAGCTC--GGGATACGATGGAAAAGACGTGGTTGTGG 1047
Query 851 AGAATCT-ACGCCAGGCTT-GCGTCTACAGAG-TGATGAATGAGAGCGGTAAGCCGTGGG 907
| ||| | | | ||| ||| | || |||| || || |||||| | ||| || || ||||
Sbjct 1048 AAAATTTGA-GACAG-CTTTGTGTTTACA-AGGTGGCGAATGAAACCGGCAAACCTTGGG 1104
Query 908 TCTGGTGGGACTATGTGACTGACTTTGCCA--TCCGGTGTCCAATGAAGGAGAAGAAGTA 965
|||||||||| ||||| ||||| ||| ||| || | ||||||||||||||||| || ||
Sbjct 1105 TCTGGTGGGATTATGTTACTGA-TTT-CCAGATCAGATGTCCAATGAAGGAGAAAAAATA 1162
Query 966 CACCAAGGAATGCGCAGA-TCAAATTATTAAGTCCCTTGGCATTGATCTCA-AGAAGGTG 1023
|| ||| || || || || || | || || || ||||| || ||| || | || ||
Sbjct 1163 CAACAAAGATTGTGCTGAGTCTG-TAATCAAATCTCTTGGAATCGATAGCAGAAAAATTG 1221
Query 1024 GACAAGTGTATTGGAGACCCTGAAGCAGA-TGTGGAGAACCCAGTTCTTAAAGCA-GAGC 1081
|||||||||| ||||||||||| || || | |||| || |||||| |||||| | || |
Sbjct 1222 -ACAAGTGTATGGGAGACCCTGATGCTGACT-TGGACAATCCAGTT-TTAAAGGAAGAAC 1278
Query 1082 AGGAGTCC-CA-GATAGGCAAAGGTTCCCGTGGAGACGTGACTATACTCCCAACTCTT-G 1138
| || | | || | | ||||| ||| | | || || || || ||| | || || ||| |
Sbjct 1279 AAGA-TGCTCAAGTT-GGCAAGGGTACAAGGGGTGATGTTACCATATTGCCTAC-CTTAG 1335
Query 1139 TCGTGAACAACAGACAATACAGAGGTAAATTGGAAAA-AGGGGCAGTACTTAAAGCTATG 1197
| || ||||||||||| ||| |||| || ||||| || || | ||||||| || ||| |
Sbjct 1336 TTGTCAACAACAGACAGTACCGAGGCAAGTTGGAGAAGAGTG-CAGTACTCAAGGCTCTA 1394
Query 1198 TGTTCGGGTTTTCAAGAGTCAACAGAACCAGCTATCTGTCTTA-CTGAAGAGT-TGGAAA 1255
|| || |||||| | |||||||| ||||||||||| || || | | | || | |||| |
Sbjct 1395 TGCTCTGGTTTTGAGGAGTCAACTGAACCAGCTATATGCCTCAGCACA-GA-TATGGAGA 1452
Query 1256 CTAATGAATGTTTGGAAAACAACGGTGGATGCTGGCAAGACAAATCTGCCAACATTACTG 1315
| || || || || || ||||| || || || |||||||| ||||| |||||||| ||||
Sbjct 1453 CAAACGAGTGCTTAGATAACAATGGCGGTTGTTGGCAAGATAAATCAGCCAACATAACTG 1512
Query 1316 CATGCAGGGATACTTTTAGGGGAAGATTGTGTGAGTGCCCTACT-GTTCAAGGTGT 1370
| |||| |||||| ||| | |||| | | || | ||| |||| | ||| | |||||
Sbjct 1513 CTTGCAAGGATACGTTTCGTGGAAAAGTATGCGTGTGTCCTA-TAGTTGATGGTGT 1567
> AT4G20110.2 | Symbols: VSR7 | VACUOLAR SORTING RECEPTOR 7 | chr4:10875233-10878729
FORWARD LENGTH=2405
Length=2405
Score = 213 bits (115), Expect = 5e-54
Identities = 342/447 (77%), Gaps = 34/447 (8%)
Strand=Plus/Plus
Query 538 CTAGATTGGACTGAGTCGGTTCCTCATCCTGATGAGCGTGTAGAGTATGAACTGTGGACT 597
|||||||||| ||||| || |||||||||||| || | ||||| ||||| |||||||||
Sbjct 860 CTAGATTGGAGAGAGTCTGTGCCTCATCCTGATAAGAGAGTAGAATATGAGCTGTGGACT 919
Query 598 AATAGCAATGATGAGTGTGG-GAA-GAAGTGTGAT-ACTCAGATTGAGTTTCTCAAAAA- 653
|||||||||||||||||||| | | | ||||||| | ||||| || ||| |||| ||
Sbjct 920 AATAGCAATGATGAGTGTGGTGCACG--GTGTGATGAA-CAGATGGACTTTGTCAAGAAC 976
Query 654 TTTCAAAGGAGC-TGCTCAGATTCTTGAGAAGGGTGGGCATACT-CAGTTCACGCCACAT 711
||| ||||| | ||||||||| || || || || || |||| | ||| ||||| |||
Sbjct 977 TTT-AAAGGT-CATGCTCAGATACTCGAAAAAGGCGGTTATACCGC-GTTTACGCCGCAT 1033
Query 712 TATATCACCTGGTACTGTCCTGA--AGCTTT-TACGCTGAGTAAACAGTGCAAGTCTCAG 768
||||| || |||| || ||| || ||| || | ||| ||| || |||||||||
Sbjct 1034 TATATTACTTGGTTTTGCCCTTTTCAG-TTTATAAAC--AGTCCACATTGTAAGTCTCAG 1090
Query 769 TGCATCAACCATGGAAGGTACTGTGCGCCTGATCCTGAGCAGGATTTTACAAAAGGGTAT 828
|| || |||||||| ||||| ||||| ||||| |||||| | |||| | | ||||||||
Sbjct 1091 TGTATAAACCATGGGAGGTATTGTGCTCCTGACCCTGAGGATAATTTCAGAGAAGGGTAT 1150
Query 829 GATGG-AAAGGATGTTGT-CGTTCAGAATCT-ACGCCAGGCTT-GCGT-CTACAGAGT-G 882
|| || |||| ||||||| | || ||||||| | | ||| ||| | || | | ||||| |
Sbjct 1151 GAAGGGAAAG-ATGTTGTGC-TTGAGAATCTGA-GACAG-CTTTGTGTGC-ATAGAGTTG 1205
Query 883 ATGAATGAGAGCGGTAAGCCGTGGGTCTGGTGGGACTATGTGACTGACTTTGCCAT-C-C 940
||||||||| | | ||| ||||| |||||||| ||||| || || ||| | || | |
Sbjct 1206 C-GAATGAGAGTAGCAGGCCTTGGGTTTGGTGGGATTATGTTACCGATTTT-C-ATTCTC 1262
Query 941 GGTGTCCAATGAAGGAGAAGAAGTACA 967
| ||| | |||||||||||||| ||||
Sbjct 1263 GATGTTCGATGAAGGAGAAGAAATACA 1289
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94728428415
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5