BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg938187 Length=1168 Score E Sequences producing significant alignments: (Bits) Value AT3G52940.1 | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis... 1912 0.0 > AT3G52940.1 | Symbols: FK, HYD2, ELL1 | Ergosterol biosynthesis ERG4/ERG24 family | chr3:19630198-19633296 REVERSE LENGTH=1465 Length=1465 Score = 1912 bits (1035), Expect = 0.0 Identities = 1116/1153 (97%), Gaps = 14/1153 (1%) Strand=Plus/Plus Query 1 GAAAATCCTTCTTCTGCTTAATGCTGCTAGATATGGATCTCGGTGTTCTTCTACCATCTC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 165 GAAAATCCTTCTTCTGCTTAATGCTGCTAGATATGGATCTCGGTGTTCTTCT----TC-C 219 Query 61 TTATTCCCTCATTGCAATCTGTTTATGTGCTGGTGTTTTACTTCGTTTACTTGGCCGTTG 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 220 --A-----TCATTGCAATCTGTTTATGTGCTGGTGTTTTACTTCGTTTACTTGGCCGTTG 272 Query 121 CCGGAGAAATTCTCCCCGGGAAAGTTATTCGCGGCGTTCTTTTATCAGATGGCTCTCAAC 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 273 CCGGAGAAATTCTCCCCGGGAAAGTTATTCGCGGCGTCCTTTTATCAGATGGCTCTCAAC 332 Query 181 TTCGTTACCGATGCAATGGTCTATTGGCATTAACATTGTTGGTAGCTATTTTGGGAATCT 240 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 333 TTCGTTACCGATGCAATGGTCTATTGGCACTAATATTGTTGGTAGCTATTTTGGGAATCT 392 Query 241 GTGCAAAACTTGGCATTGTATCACCTCTTGTGGTTGCGGATAGAGGACTTGAGCTACTCT 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 393 GTGCAAAACTTGGCATTGTATCACCTCTTGTGGTTGCGGATAGAGGACTTGAGTTACTCT 452 Query 301 CTGCTACTTTTATTTTCTGTGTTTTGGTGACATTAGCATTGTATGTTACTGGGCGAAATT 360 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 453 CAGCTACTTTTATTTTCTGTGTTTTGGTGACATTAGCATTGTATGTTACTGGGCGAAGTT 512 Query 361 CTTCCG-ATAAGAGTTCTTCCCTAAAGCCTCATGTCTCAGGAAATCTTGTACATGATTGG 419 | | || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 513 CCT-CGAATAAGGGTTCTTCCCTAAAGCCTCATGTCTCAGGAAATCTTGTACATGACTGG 571 Query 420 TGGTTTGGAATACAGTTGAATCCTCAGTTTATGAGCATCGATCTCAAGTTTTTCTTTGTC 479 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 572 TGGTTTGGAATACAGCTGAATCCTCAGTTTATGAGCATTGATCTCAAGTTTTTCTTTGTC 631 Query 480 AGAGCCGGGATGATGGGATGGCTGCTTATCAATCTCTCTATTCTGGCAAAAAGTGTGCAG 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 632 AGAGCCGGGATGATGGGATGGCTGCTTATCAATCTCTCTATTCTGGCAAAAAGTGTGCAG 691 Query 540 GATGGTTCCTTGAGTCAGTCGATGATTCTTTACCAGATTTTCTGTGCGTTATATATATTG 599 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 692 GATGGTTCCTTGAGTCAGTCGATGATTCTTTACCAGATCTTCTGTGCGTTATATATATTG 751 Query 600 GACTACTTTGTTCATGAAGAATACATGACCTCTACGTGGGACATAATTGCAGAGAGACTG 659 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 752 GACTACTTTGTTCATGAAGAATACATGACCTCTACGTGGGACATAATTGCAGAGAGACTA 811 Query 660 GGCTTCATGCTAGTGTTTGGAGATCTCCTGTGGATTCCTTTCACTTTTAGCATTCAGGGC 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 812 GGCTTCATGCTAGTGTTTGGAGATCTCCTGTGGATTCCTTTCACTTTTAGCATTCAGGGC 871 Query 720 TGGTGGCTTTTGCACAACAAAGTAGAACTAACAGTTCCTGCTATTGTAGCCAATTGCCTT 779 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct 872 TGGTGGCTTTTGCACAACAAAGTAGAACTAACAGTTCCTGCGATTGTAGTCAATTGCCTT 931 Query 780 GTCTTCGTGATAGGGTACATGGTTTTTCGAGGGGCTAACAAACAAAAACATATCTTTAAG 839 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 932 GTCTTCTTGATAGGGTACATGGTTTTTCGAGGAGCTAACAAACAAAAACATATCTTTAAG 991 Query 840 AAGAACCCAAAAACACCTATATGGGGCAAGCCTCCAGTGGTAGTTGGTGGAAAGTTACTG 899 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 992 AAGAACCCAAAAACACCAATATGGGGCAAGCCTCCAGTGGTAGTTGGTGGAAAGTTACTG 1051 Query 900 GCTTCAGGCTATTGGGGAATTGCAAGGCACTGTAATTACCTTGGCGACTTGATGCTTGCT 959 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1052 GTTTCAGGCTATTGGGGAATTGCAAGGCACTGTAATTACCTTGGCGACTTGATGCTTGCT 1111 Query 960 CTGTCCTTCAGTTTGCCCTGTGGAATAAGTTCTCCGGTTCCATATTTCTACCCAATATAT 1019 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 1112 CTGTCCTTCAGTTTGCCATGTGGAATAAGTTCTCCGGTTCCATATTTCTACCCGATATAC 1171 Query 1020 CTTCTGATACTATTGATATGGAGAGAACGAAGAGACGAGGTTCGATGTGCAGAGAAGTAC 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1172 CTTCTGATACTATTGATATGGAGAGAACGAAGAGACGAGGTTCGATGTGCAGAGAAGTAC 1231 Query 1080 AAGGAGATCTGGGCAGAGTATCTTAGACTTGTCCCCTGGAGAATACTTCCTTATGTTTAT 1139 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1232 AAGGAGATATGGGCAGAGTATCTTAGACTTGTCCCCTGGAGAATACTTCCTTATGTTTAT 1291 Query 1140 TAGATGTGCCAAG 1152 ||||||||||||| Sbjct 1292 TAGATGTGCCAAG 1304 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57329022390 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5