BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938193
Length=1624
Score E
Sequences producing significant alignments: (Bits) Value
AT3G52990.1 | Symbols: | Pyruvate kinase family protein | chr3... 2715 0.0
AT2G36580.1 | Symbols: | Pyruvate kinase family protein | chr2... 1943 0.0
> AT3G52990.1 | Symbols: | Pyruvate kinase family protein | chr3:19648861-19652508
FORWARD LENGTH=2040
Length=2040
Score = 2715 bits (1470), Expect = 0.0
Identities = 1574/1625 (97%), Gaps = 3/1625 (0%)
Strand=Plus/Plus
Query 2 TCCACTTCCGTCACCGAAGATGCATTCCAGTCATCTTCTTCTCGAGGAGCCGATCAGGAT 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 TCCACTTCCGTCACCGAAGATGCATTCCAGTCATCTTCTTCTCGAGGAGCCGATCAGGAT 226
Query 62 GGCTTCAATCCTTGAGCCTTCCAAATCTAGTTTCTTCCCGGCATTGACTAAGATCGTCGG 121
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 227 GGCTTCAATCCTCGAGCCTTCCAAATCTAGTTTCTTCCCGGCATTGACTAAGATCGTCGG 286
Query 122 AACTCTCGGTCCTAAATCCCGATCCGTCGAGGCTCTCTCCGGCTGTCTCAAAGCCGGCAT 181
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 AACTCTAGGTCCTAAATCCCGATCCGTCGAGGCTCTCTCCGGCTGTCTCAAAGCCGGCAT 346
Query 182 GTCTGTGGCTCGATTCGATTTCTCTTGGGGAGATGCTGATTATCACCAGGAGACACTTGA 241
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 347 GTCTGTGGCTCGATTTGATTTCTCGTGGGGAGATGCTGATTATCACCAGGAGACACTTGA 406
Query 242 TAATCTCAAGGTTGCTGTGAGGAGCACTAAGAAGCTTTGTGCTGTTATGCTTGATACTGT 301
|||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 407 TAATTTGAAAGTTGCTGTGAGGAGCACTAAGAAGCTTTGTGCTGTTATGCTTGATACTGT 466
Query 302 GGGACCTGAGCTACAAGTTATTAACAAATCTGAGAAAGCTATTACTTTGAAAGCTGATGG 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 467 TGGACCTGAGCTACAAGTTATTAACAAATCTGAGAAAGCTATTACTTTGAAAGCTGATGG 526
Query 362 CCTTGTAACTTTGACGCCCAATCAAGACCAAGAAGCTTCTTCTGAAGTTCTTCCCATTAA 421
||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct 527 CCTTGTAACTTTGACACCGAATCAAGATCAAGAAGCTTCTTCTGAAGTTCTTCCCATTAA 586
Query 422 TTTCAGTGGGCTTGCCAAGGCAGTGAAGAAAGGAGACACTATCTTTGTTGGGCAATACCT 481
||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 587 TTTCAATGGACTTGCCAAGGCAGTGAAGAAAGGAGACACCATCTTCGTTGGGCAATACCT 646
Query 482 CTTCACTGGTAGTGAAACAACTTCAGTTTGGCTTGAGGTTGATGAAGTGAAAGGAGATGA 541
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 647 ATTCACTGGTAGTGAAACAACTTCAGTTTGGCTCGAGGTTGATGAAGTTAAAGGAGATGA 706
Query 542 TGTCATTTGCCTGTCAAGGAATGCTGCTACTCTGGCTGGTTCTCTATTCACTTTACA-TG 600
|||||||||||| |||||||||||||||||||||||||||||| | ||||||||||| |
Sbjct 707 TGTCATTTGCCTTTCAAGGAATGCTGCTACTCTGGCTGGTTCTTTGTTCACTTTACACT- 765
Query 601 CCTCTCAAGTTCATATCGATCTGCCAACTCTCACAGAGAAGGATAAGGAGGTTATAAGCA 660
||||||||||||| || ||||| ||||| || ||||||||||||||||||||||||||||
Sbjct 766 CCTCTCAAGTTCACATTGATCTCCCAACGCTTACAGAGAAGGATAAGGAGGTTATAAGCA 825
Query 661 CATGGGGAGTTCAAAATAAAATCGATTTTCTCTCGTTGTCTTATTGTCGTCATGCGGAGG 720
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 826 CATGGGGAGTTCAAAATAAAATCGATTTTCTCTCATTGTCTTATTGTCGTCATGCTGAGG 885
Query 721 ATGTTCGCCAGACCCGTGAAATGCTTAAAAAGTTGGGCGACCTCTCTCAAACACAAATAT 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 ATGTTCGCCAGACCCGTGAAATGCTTAAAAAGTTGGGCGACCTCTCTCAAACACAAATAT 945
Query 781 TTGCTAAGATTGAGAATGTAGAGGGACTAACCCACTTCGATGAGATTCTACAAGAAGCTG 840
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 TTGCTAAGATTGAGAACGTAGAGGGACTAACCCACTTCGATGAGATTCTACAAGAAGCTG 1005
Query 841 ATGGCATTATTCTTTCTCGTGGTAATTTGGGTATAGATTTACCCCCAGAAAAGGTGTTTT 900
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1006 ATGGCATTATTCTTTCTCGTGGGAATTTGGGTATAGATTTACCCCCGGAAAAGGTGTTTT 1065
Query 901 TGTTTCAAAAGGCTGCTCTTTACAAGTGCAACATGGCTGGAAAGCCAGCCGTTCTTACCC 960
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1066 TGTTTCAAAAGGCTGCTCTTTACAAGTGCAACATGGCTGGAAAGCCAGCTGTTCTTACCC 1125
Query 961 GTGTTGTTGACAGTATGACTGACAACTTGCGTCCAACTCGTGCTGAGGCAACGGATGTTG 1020
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1126 GTGTTGTTGACAGTATGACTGACAACTTGCGACCAACTCGTGCTGAGGCCACGGATGTTG 1185
Query 1021 CTAATGCTGTTTTAGATGGAAGTGATGCAATTCTTCTTGGTGCTGAGACCCTTCGTGGAT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1186 CTAATGCTGTTTTAGATGGAAGTGATGCAATTCTTCTTGGTGCTGAGACCCTTCGTGGAT 1245
Query 1081 TGTACCCTGTTGAGACAATTTCAACTGTTGGTAGGATCTGTGCTGAGGCAGAAAAGGTTT 1140
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1246 TGTACCCTGTTGAGACAATATCAACTGTTGGTAGGATCTGTGCTGAGGCAGAAAAGGTTT 1305
Query 1141 TCAATCAAGATTTGTACTTTAAGAAGACTGTCAAGTATGTTGGAGAACCGATGACTCACT 1200
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1306 TCAATCAAGATTTGTACTTTAAGAAGACTGTCAAGTATGTTGGAGAACCAATGACTCACT 1365
Query 1201 TGGAATCGATTGCTTCTTCAGCTGTACGGGCAGCCATCAAGGTTAAGGCATCCGTGATTA 1260
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1366 TGGAATCGATTGCTTCTTCAGCTGTACGGGCAGCCATTAAGGTTAAGGCATCCGTAATTA 1425
Query 1261 TATGCTTCACCTCTTCTGGAAGGGCAGCCAGGTTGATTGCCAAATACAGGCCAACGATGC 1320
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1426 TATGCTTCACCTCTTCTGGAAGAGCAGCCAGATTGATTGCCAAATACAGGCCAACGATGC 1485
Query 1321 CGGTTATTTCTGTTGTCATTCCCCGGGTTAAGACAAATCAGCTGAAATGGAGCTTTAGTG 1380
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1486 CGGTTATTTCTGTTGTCATTCCCCGGGTTAAGACAAATCAACTGAAATGGAGCTTTAGTG 1545
Query 1381 GAGCTTTTGAGGCGAGGCAGTCACTTATTGTAAGAGGTCTCTTCCCAATGCTCGCTGACC 1440
||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||
Sbjct 1546 GAGCTTTTGAGGCGAGGCAGTCACTTATTGTCAGAGGCCTCTTCCCTATGCTTGCTGACC 1605
Query 1441 CTCGTCACCCTGCGGAATCTACAAGTGCGACAAACGAGTCAGTCCTGAAGGTTGCTCTAG 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1606 CTCGTCACCCTGCGGAATCTACAAGTGCGACAAACGAGTCAGTCCTGAAGGTTGCTCTAG 1665
Query 1501 ACCATGGGAAGCATGCTGGAGTTATCAAGTCGCATGACAGAGTAGTGGTGTGTCAGAAAG 1560
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1666 ACCATGGGAAGCATGCTGGAGTAATCAAGTCGCATGACAGAGTAGTGGTGTGTCAGAAAG 1725
Query 1561 TTGGTGATGCATCTGTGGTTAAGATTATCGAGCTTGAGGATTAACTTTTGCCTCGCAAAA 1620
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1726 TTGGTGATGCATCTGTGGTTAAGATCATTGAGCTTGAGGATTAACTTTTGCCTCGCAAAA 1785
Query 1621 -CATT 1624
||||
Sbjct 1786 ACATT 1790
> AT2G36580.1 | Symbols: | Pyruvate kinase family protein | chr2:15339122-15343086
FORWARD LENGTH=2020
Length=2020
Score = 1943 bits (1052), Expect = 0.0
Identities = 1417/1594 (89%), Gaps = 22/1594 (1%)
Strand=Plus/Plus
Query 21 ATGCATTCCAGTCATCTTCTTCTCGAGGAGCCGATCAGGATGGCTTCAATCCTTGAGCCT 80
|||||||| |||||||| ||||||||||| |||||||||||| |||||||||| || |||
Sbjct 132 ATGCATTCAAGTCATCTCCTTCTCGAGGAACCGATCAGGATGACTTCAATCCTCGAACCT 191
Query 81 TCCAAATCTAGTTTCTTCCCGGCATTGACTAAGATCGTCGGAACTCTCGGTCCTAAATCC 140
|| ||||| |||||||||||||| ||||||||||| || || ||||| ||||| |||||
Sbjct 192 TCTAAATCAAGTTTCTTCCCGGCTTTGACTAAGATTGTTGGGACTCTAGGTCCGAAATCT 251
Query 141 CGATCCGTCGAGGCT-CTCT-CCGGCTGTCTCAAAGCCGGCATGTCTGTGGCTCGATTCG 198
||||||||||||| | | | | || ||||||||||| || ||||| |||||||||||||
Sbjct 252 CGATCCGTCGAGG-TGAT-TGCTGGTTGTCTCAAAGCTGGAATGTCCGTGGCTCGATTCG 309
Query 199 ATTTCTCTTGGGGAGATGCTGATTATCACCAGGAGACACTTGATAATCTCAAGGTTGCTG 258
||||||||||| | ||||||||||||||||||||||| || || ||||| ||| | ||||
Sbjct 310 ATTTCTCTTGGTGCGATGCTGATTATCACCAGGAGACGCTGGAGAATCTGAAGATAGCTG 369
Query 259 TGAGGAGCACTAAGAAGCTTTGTGCTGTTATGCTTGATACTGTGGGACCTGAGCTACAAG 318
||| |||||||||||||||||||||||||||||| || ||||| ||||||||| | ||||
Sbjct 370 TGAAGAGCACTAAGAAGCTTTGTGCTGTTATGCTAGACACTGTAGGACCTGAGTTGCAAG 429
Query 319 TTATTAACAA-ATCTGAGAAAGCTATTACT-TTGAAAGCTGATGGCCTTGTAACTTTGAC 376
|||||||||| | |||||||||||||| || || ||||||||||||||||||||||||||
Sbjct 430 TTATTAACAAGA-CTGAGAAAGCTATTTCTCTT-AAAGCTGATGGCCTTGTAACTTTGAC 487
Query 377 GCCCAATCAAGACCAAGAAGCTTCTTCTGAAGTTCTTCCCATTAA-TTTCAGTGGGCTT- 434
|| | |||||| |||||||| || |||||||| ||||||||||| ||| | |||| ||
Sbjct 488 TCCGAGTCAAGATCAAGAAGCCTCCTCTGAAGTCCTTCCCATTAATTTTGA-TGGG-TTA 545
Query 435 GCCAAGGCAGTGAAGAAAGGAGACACTATCTTTGTTGGGCAATACCTCTTCACTGGTAGT 494
|| ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 546 GCGAAGGCGGTTAAGAAAGGAGACACTATCTTTGTTGGACAATACCTCTTCACTGGTAGT 605
Query 495 GAAACAACTTCAGTTTGGCTTGAGGTTGATGAAGTGAAAGGAGATGATGTCATTTGCCTG 554
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |
Sbjct 606 GAAACAACTTCAGTTTGGCTTGAGGTTGAAGAAGTTAAAGGAGATGATGTCATTTGTATT 665
Query 555 TCAAGGAATGCTGCTACTCTGGCTGGTTC-TCTATTCACTTTACATGCCTCTCAAGTTCA 613
|||||||||||||||||||||| |||| | | ||||||| || || | ||||||||||||
Sbjct 666 TCAAGGAATGCTGCTACTCTGGGTGGTCCGT-TATTCACATTGCACGTCTCTCAAGTTCA 724
Query 614 TATCGATCTGCCAACTCTCACAGAGAAGGATAAGGAGGTTATAAGCACATGGGGAGTTCA 673
|| ||| ||||||| || || ||||||||||||||||||||||| ||||||||||||||
Sbjct 725 CATTGATATGCCAACCCTAACTGAGAAGGATAAGGAGGTTATAAGTACATGGGGAGTTCA 784
Query 674 AAATAAAATCGATTTTCTCTCGTTGTCTTATTGTCGTCATGCGGAGGATGTTCGCCAGAC 733
||||| ||||| |||||||| || ||||||||||| ||||| || |||||||||||| |
Sbjct 785 GAATAAGATCGACTTTCTCTCATTATCTTATTGTCGACATGCAGAAGATGTTCGCCAGGC 844
Query 734 CCGTGAAATGCTTAAAAAGTTG-GGCGACCTCTCTCAAACACAAATATTTGCTAAGATTG 792
|||||| ||||| || ||||| || |||||||||||||||||||||||||| |||||||
Sbjct 845 CCGTGAGTTGCTT-AACAGTTGTGGTGACCTCTCTCAAACACAAATATTTGCGAAGATTG 903
Query 793 AGAATGTAGAGGGACTAACCCACTTCGATGAGATTCTACAAGAAGCTGATGGCATTATTC 852
|||||| |||||||||||||||||| || || |||||||||||||| |||||||||||||
Sbjct 904 AGAATGAAGAGGGACTAACCCACTTTGACGAAATTCTACAAGAAGCAGATGGCATTATTC 963
Query 853 TTTCTCGTGGTAATTTGGGTATAGATTTACCCCCAGAAAAGGTGTTTTTGTTTCAAAAGG 912
|||||||||| ||||||||||| ||| |||| || ||||||||||||||||| |||||||
Sbjct 964 TTTCTCGTGGGAATTTGGGTATCGATCTACCTCCGGAAAAGGTGTTTTTGTTCCAAAAGG 1023
Query 913 CTGCTCTTTACAAGTGCAACATGGCTGGAAAGCCAGCCGTTCTTACCCGTGTTGTTGACA 972
|||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||
Sbjct 1024 CTGCTCTTTACAAGTGTAACATGGCTGGAAAGCCTGCCGTTCTTACTCGTGTTGTAGACA 1083
Query 973 GTATGACTGACAACT-TGCGTCCAACTCGTGCTGAGGCAACGGATGTTGCTAATGCTGTT 1031
||||||| ||||| | |||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct 1084 GTATGACAGACAA-TCTGCGGCCAACTCGTGCAGAGGCAACTGATGTTGCTAATGCTGTT 1142
Query 1032 TTAGATGGAAGTGATGCAATTCTTCTTGGTGCTGAGACCCTTCGTGGATTGTACCCTGTT 1091
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1143 TTAGATGGAAGTGATGCAATTCTTCTTGGTGCTGAGACTCTTCGTGGATTGTACCCTGTT 1202
Query 1092 GAGACAATTTCAACTGTTGGTAGGATCTGT-GCTGAGGCAGA-AAAGGTTTTCAATCAAG 1149
|| || || |||||||||||||| |||||| | ||||||||| |||| ||||||| ||||
Sbjct 1203 GAAACCATATCAACTGTTGGTAGAATCTGTTG-TGAGGCAGAGAAAG-TTTTCAACCAAG 1260
Query 1150 ATTTGTACTTTAAGAAGACTGTCAAGTATGTTGGAGAACCGATGACTCACTTGGAATCGA 1209
|||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1261 ATTTGTTCTTTAAGAAGACTGTCAAGTATGTTGGAGAACCAATGACTCACTTGGAATCTA 1320
Query 1210 TTGCTTCTTCAGCTGTACGGGCAGCCATCAAGGTTAAGGCATCCGTGATTATATGCTTCA 1269
|||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 1321 TTGCTTCTTCTGCTGTACGGGCAGCAATCAAGGTTAAGGCATCCGTAATTATATGCTTCA 1380
Query 1270 CCTCTTCTGGAAGGGCAGCCAGGTTGATTGCCAAATACAGGCCAACGATGCCGGTTATTT 1329
|||| ||||| || ||||| |||||||||||||||||| | ||||| ||||| ||| | |
Sbjct 1381 CCTCGTCTGGCAGAGCAGCAAGGTTGATTGCCAAATACCGTCCAACTATGCCCGTTCTCT 1440
Query 1330 CTGTTGTCATTCCCCGGGTTAAGACAAATCAGCTGAAATGGAGCTTTAGTGGAGCTTTTG 1389
|||||||||||||||| ||| ||||||||||||||| ||||||||||| ||||| ||||
Sbjct 1441 CTGTTGTCATTCCCCGACTTACGACAAATCAGCTGAAGTGGAGCTTTAGCGGAGCCTTTG 1500
Query 1390 AGGCGAGGCAGTCACTTATTGTAAGAGGTCTCTTCCCAATGCTCGCTGACCCTCGTCACC 1449
|||| ||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||
Sbjct 1501 AGGCAAGGCAGTCACTTATTGTCAGAGGTCTTTTCCCCATGCTTGCTGATCCTCGTCACC 1560
Query 1450 CTGCGGAATCTACAAGTGCGACAAACGAGTCAGTCCTGAAGGTTGCTCTAGACCATGGGA 1509
|||||||||| |||||||| ||||| ||||| || || || || ||||||||||||||||
Sbjct 1561 CTGCGGAATCAACAAGTGCAACAAATGAGTCGGTTCTTAAAGTGGCTCTAGACCATGGGA 1620
Query 1510 AGCATGCTGGAGTTATCAAGTCGCATGACAGAGTAGTGGTGTGTCAGAAAGTTGGTGATG 1569
|||| || ||||| |||||||| ||||||||||| ||||| ||||||||||| || ||||
Sbjct 1621 AGCAAGCCGGAGTGATCAAGTCACATGACAGAGTTGTGGTCTGTCAGAAAGTGGGAGATG 1680
Query 1570 CATCTGTGGTTAAGATTATCGAGCTTGAGGATTA 1603
| || ||||| || || |||||||| ||||||||
Sbjct 1681 CGTCCGTGGTCAAAATCATCGAGCTAGAGGATTA 1714
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80220470910
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5