BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938213
Length=1567
Score E
Sequences producing significant alignments: (Bits) Value
AT3G53150.1 | Symbols: UGT73D1 | UDP-glucosyl transferase 73D1 ... 2416 0.0
> AT3G53150.1 | Symbols: UGT73D1 | UDP-glucosyl transferase 73D1
| chr3:19697736-19699259 REVERSE LENGTH=1524
Length=1524
Score = 2416 bits (1308), Expect = 0.0
Identities = 1457/1529 (95%), Gaps = 10/1529 (1%)
Strand=Plus/Plus
Query 24 ATGGAATCAAAACTAGTTTCAAAAGCCAAAAAACTTCACTTTGTTTTGATCCCTCTCATG 83
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1 ATGGAATCAAAAATAGTTTCAAAAGCCAAAAGACTTCACTTTGTTTTGATCCCTCTCATG 60
Query 84 GCTCAAGGGCATCTGATCCCTATGGTCGACATCTCCAAGATTCTTGCGCGACAAGGCAAC 143
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 61 GCTCAAGGGCATCTGATCCCCATGGTCGACATCTCCAAGATTCTTGCACGACAAGGCAAC 120
Query 144 ATCGTTACCATAGTTACAACCCCTCAAAATGCTTCTAGGTTTGCGAAGACAGTTGACCGA 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 ATCGTTACCATAGTTACAACCCCTCAAAATGCTTCTAGGTTTGCGAAGACAGTTGACCGA 180
Query 204 GCAAGATCGGAGTCGGGTCTTAAAGTGATCAATGTCGTTAAATTTCCAATTCCTTACAAA 263
||||||| ||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 181 GCAAGATTAGAGTCGGGTCTCGAA---ATCAATGTCGTTAAATTTCCAATTCCTTACAAA 237
Query 264 GAATTCGGTCTTCCCAAAGATTGTGAGACTCTCGACACTTTGCCCTCTAAAGACCTCCTA 323
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 238 GAATTCGGTCTTCCCAAAGATTGTGAGACTCTGGACACTTTGCCCTCCAAAGACCTCCTA 297
Query 324 CGGAA-ATTCTATGACGCTGTGGACAAACTTCAGGAGCCTTTGGAACGGTTTCTTGAGCA 382
| ||| |||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct 298 C-GAAGATTCTATGACGCTGTGGATAAACTCCAAGAGCCCATGGAACGGTTTCTTGAGCA 356
Query 383 ACACGATATCCCTCCAAGTTGCATAATCTCCGATAAATGCCTTTTTTGGACGTCAAAAAC 442
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 357 ACAAGATATCCCTCCAAGTTGCATAATCTCCGATAAATGCCTTTTTTGGACGTCAAGAAC 416
Query 443 CGCAAAGAGGTTCAAGATCCCGAGGATCGTTTTCCATGGAATGTGTTGCTTCTCTCTTTT 502
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 417 CGCAAAGAGGTTCAAAATCCCGAGGATCGTGTTCCATGGAATGTGTTGCTTCTCTCTTTT 476
Query 503 GAGTTCGCACAACGTCCATCTTCATAGCCCGCACCTTTCGGTTTCTTCGGCC-TCAGAGC 561
|||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||||
Sbjct 477 GAGTTCGCACAATATCCATCTTCATAGCCCGCACCTCTCGGTTTCTTCGGCCGT-AGAGC 535
Query 562 CATTCTCTATACCAGGAATGCCACATAGGATTGAGATAGCTAGAGATCAGTTACCGGGTG 621
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 536 CATTCCCTATACCAGGAATGCCACATAGGATTGAGATAGCTAGAGCTCAGTTACCTGGTG 595
Query 622 CGTTTAAGAAGTTAGCAAATATGGATGACGTTCGCGAGAAGATGCGTGAATCTGAATCAG 681
| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 596 CTTTTGAGAAGTTAGCAAATATGGATGACGTTCGCGAGAAGATGCGTGAATCTGAATCAG 655
Query 682 AAGCCTTTGGGGTTATTGTTAATAGCTTCCAAGAATTGGAGCCTGGCTATGCAGAGGCCT 741
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 656 AAGCCTTTGGGGTTATTGTTAATAGCTTCCAGGAATTGGAGCCTGGCTATGCAGAGGCCT 715
Query 742 ACGCTGAGGCCATCAATAAGAAGGTATGGTTCGTTGGACCCGTTTCTTTATGCAACGACC 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 ACGCTGAGGCCATCAATAAGAAGGTATGGTTCGTTGGACCCGTTTCTTTATGCAACGACC 775
Query 802 GTGTGGCGGACCTATTCGATAGAGGAAACAACGGTAACATCGCGATAAGTGAGACCGAAT 861
|| |||| ||||||||||||||||||| || ||||||||||| ||||| ||||||||||
Sbjct 776 GTATGGCTGACCTATTCGATAGAGGAAGTAATGGTAACATCGCAATAAGCGAGACCGAAT 835
Query 862 GCTTGCAGTTTCTCGACTCGATGAAACCAAGGTCTGTCTTATATGTTTGTCTTGGTAGCC 921
||||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||||
Sbjct 836 GCTTGCAGTTTCTTGACTCGATGAGACCAAGGTCAGTCTTATATGTTTCTCTTGGTAGCC 895
Query 922 TCTGTCGACTAATACCTATTCAACTAATAGAACTAGGTTTAGGGTTAGAAGAATCGGGAA 981
|||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||
Sbjct 896 TCTGTCGACTAATACCTAATCAATTGATAGAACTAGGTTTAGGGTTAGAAGAATCGGGAA 955
Query 982 AACCCTTTATTTGGGTGATCAAGACCGAGGAAAAACACATGAATGAGCTAGACGAATGGC 1041
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 956 AACCCTTTATTTGGGTGATAAAGACCGAGGAAAAACACATGATTGAGCTAGACGAATGGC 1015
Query 1042 TAAAACGCGAAAATTTTGAAGAGCGAGTTAGAGGAAGAGGGATAATAATAAGGGGTTGGA 1101
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 1016 TAAAACGCGAAAATTTTGAAGAGCGAGTTAGAGGAAGAGGGATAGTAATAAAGGGTTGGA 1075
Query 1102 GTCCTCAGGCTATGATACTTTCACATGGTTCAACCGGAGGGTTCTTAACTCATTGCGGTT 1161
||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||
Sbjct 1076 GTCCTCAGGCTATGATACTCTCACATGGTTCAACCGGCGGGTTCTTGACTCATTGCGGTT 1135
Query 1162 GGAACTCTACAATAGAAGCGATATGTTTTGGTGTACCAATGATCACATGGCCGTTGTTCG 1221
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 GGAATTCTACAATAGAAGCGATATGTTTTGGTGTACCAATGATCACATGGCCGTTGTTCG 1195
Query 1222 CTGAACAATTCCTCAATGAGAAACTAATCGTGGAGGTTTTGAATATCGGGGTTAGGGTTG 1281
|||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1196 CTGAACAATTTCTCAATGAGAAACTCATCGTGGAGGTTTTGAACATCGGGGTTAGGGTTG 1255
Query 1282 GGGTGGACATTCCGGTGAGATGGGGAGACGAGGAGAGGCTTGGAGTGTTGGTCAAGAAAC 1341
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1256 GGGTGGAGATTCCGGTGAGATGGGGAGACGAGGAGAGACTTGGAGTGTTGGTCAAGAAAC 1315
Query 1342 AGAGTGTTGTGAAAGCTATAAAGCTTTTGATGGACGAAGATTGTCAACGTGTAGACG--A 1399
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 1316 CGAGTGTTGTGAAAGCTATAAAGCTTTTGATGGACCAAGATTGTCAACGTGTAGACGAAA 1375
Query 1400 A-GATGATGATAGTGAATTCGTGAGACGAAGGAGACGTATTCAAGAACTTGCAGTAATGG 1458
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1376 ATGATGATGATAATGAATTCGTGAGACGAAGGAGACGTATTCAAGAACTTGCAGTAATGG 1435
Query 1459 CGAAAAAGGCTGTGGAAGAAAAGGGATCTTCGAGTATTAACGTTTCAATTTTAATCCAAG 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1436 CGAAAAAGGCTGTGGAAGAAAAGGGATCTTCGAGTATTAACGTTTCAATTTTAATCCAAG 1495
Query 1519 ATGTTTTAGAGCACTTGAGTCTTGAGTAG 1547
||||||| ||||| |||||||| | ||||
Sbjct 1496 ATGTTTTGGAGCAATTGAGTCTCGTGTAG 1524
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77359039845
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5