BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938226
Length=2195
Score E
Sequences producing significant alignments: (Bits) Value
AT3G53260.1 | Symbols: PAL2, ATPAL2 | phenylalanine ammonia-lya... 3541 0.0
AT2G37040.1 | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr... 2095 0.0
> AT3G53260.1 | Symbols: PAL2, ATPAL2 | phenylalanine ammonia-lyase
2 | chr3:19744051-19746780 REVERSE LENGTH=2520
Length=2520
Score = 3541 bits (1917), Expect = 0.0
Identities = 2099/2190 (96%), Gaps = 0/2190 (0%)
Strand=Plus/Plus
Query 6 ACTTCTTGAAAACCAATGGATCAAATCGAAGCAATGTTGTGCGGCGGAGGAGAGAAGACG 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 147 ACTTCTTGAAAACCAATGGATCAAATCGAAGCAATGTTGTGCGGCGGAGGAGAGAAGACA 206
Query 66 AAAGTGGCGGTTACTACTAAGACGGTGGCAGATCCGTTGAACTGGGGTTTAGCGGCGGAT 125
||||||||||||||||| ||||| |||||||||| ||||| ||||||||||| ||||||
Sbjct 207 AAAGTGGCGGTTACTACGAAGACTTTGGCAGATCCATTGAATTGGGGTTTAGCAGCGGAT 266
Query 126 CAAATGAAAGGAAGTCATTTAGATGAAGTGAAGAAGATGGTCGAAGAGTACCGGAGACCA 185
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 267 CAAATGAAAGGAAGTCATTTAGATGAAGTGAAGAAGATGGTCGAAGAGTATCGTAGACCA 326
Query 186 GTTGTGAATCTTGGTGGAGAAACACTGACGATCGGACAAGTTGCGGCGATCTCCACCGTA 245
|| ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 327 GTCGTGAATCTTGGCGGAGAAACACTGACGATCGGACAAGTTGCTGCCATCTCCACCGTA 386
Query 246 GGCGGCAGCGTTAAGGTTGAGTTAGCGGAGGCTTCAAGAGCCGGTGTCAAAGCTAGCAGT 305
|| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 387 GGAGGCAGCGTTAAGGTTGAGTTAGCGGAGACTTCAAGAGCCGGTGTGAAAGCTAGCAGT 446
Query 306 GATTGGGTTATGGAGAGTATGAACAAAGGCACTGACAGTTACGGTGTCACCACCGGCTTT 365
||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct 447 GATTGGGTTATGGAGAGCATGAACAAAGGTACTGACAGTTACGGAGTCACCACCGGCTTT 506
Query 366 GGTGCTACTTCTCACCGGAGAACCAAAAACGGCACCGCATTACAAACAGAACTCATTAGA 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 507 GGTGCTACTTCTCACCGGAGAACCAAAAACGGCACCGCATTACAAACAGAACTCATTAGA 566
Query 426 TTTTTGAACGCCGGAATATTCGGAAACACGAAGGAGACATGTCACACGCTGCCGCAATCC 485
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 567 TTTTTGAACGCCGGAATATTCGGAAACACGAAGGAGACATGTCACACACTGCCGCAATCC 626
Query 486 GCCACAAGAGCCGCCATGCTCGTCAGAGTCAACACTCTTCTCCAAGGATACTCCGGTATC 545
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 627 GCCACAAGAGCCGCCATGCTCGTCAGAGTCAACACTCTTCTCCAAGGATACTCCGGGATC 686
Query 546 CGATTCGAGATTCTCGAAGCGATTACAAGTCTCCTCAATCACAACATCTCTCCTTCACTT 605
||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 687 CGATTCGAGATCCTCGAAGCGATTACAAGTCTCCTCAACCACAACATCTCTCCGTCACTA 746
Query 606 CCTCTCCGTGGAACCATAACCGCCTCCGGCGATCTCGTTCCTCTCTCCTACATCGCCGGA 665
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 747 CCTCTCCGTGGAACCATTACCGCCTCCGGCGATCTCGTTCCTCTCTCTTACATCGCCGGA 806
Query 666 ATTCTAACCGGCCGTCCTAATTCCAAAGCCACCGGTCCCGCCGGTGAATCGCTAACCGCG 725
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 807 CTTCTCACCGGCCGTCCTAATTCCAAAGCCACCGGTCCCGACGGTGAATCGCTAACCGCG 866
Query 726 AAAGAAGCTTTCGAGAAAGCCGGAATCAGTTCCGGATTCTTCGATCTACAGCCTAAGGAA 785
||||||||||| |||||||||||||||||| | |||||||||||| |||| |||||||||
Sbjct 867 AAAGAAGCTTTTGAGAAAGCCGGAATCAGTACTGGATTCTTCGATTTACAACCTAAGGAA 926
Query 786 GGATTAGCTCTCGTTAATGGCACGGCGGTTGGATCTGGCATGGCGTCGATGGTTCTATTC 845
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 927 GGTTTAGCTCTCGTTAATGGCACGGCGGTTGGATCTGGAATGGCGTCGATGGTTCTATTC 986
Query 846 GAAGCCAATGTTCAAGCGGTGTTAGCGGAGGTTTTATCAGCGATTTTCGCGGAGGTTATG 905
||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 987 GAAGCGAATGTCCAAGCGGTGTTAGCGGAGGTTTTATCAGCGATCTTCGCGGAGGTTATG 1046
Query 906 AGCGGGAAACCTGAATTCACCGATCATCTGACTCACCGTTTGAAGCATCATCCCGGACAA 965
|||||||||||||| || ||||||||||||||||| ||||| || |||||||||||||||
Sbjct 1047 AGCGGGAAACCTGAGTTTACCGATCATCTGACTCATCGTTTAAAACATCATCCCGGACAA 1106
Query 966 ATCGAAGCGGCGGCGATAATGGAACATATCCTCGACGGAAGCTCATACATGAAATTAGCT 1025
||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct 1107 ATCGAAGCGGCGGCGATAATGGAGCACATACTCGACGGAAGCTCATACATGAAATTAGCT 1166
Query 1026 CAAAAGCTTCACGAGATGGATCCATTGCAGAAGCCGAAACAAGATCGTTACGCTCTTCGT 1085
|||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1167 CAAAAGGTTCACGAGATGGATCCATTGCAGAAACCAAAACAAGATCGTTACGCTCTTCGT 1226
Query 1086 ACCTCTCCTCAATGGCTAGGACCTCAAATTGAAGTAATCCGTCAAGCTACGAAATCGATT 1145
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1227 ACATCTCCTCAATGGCTAGGTCCTCAAATTGAAGTAATCCGTCAAGCTACGAAATCGATA 1286
Query 1146 GAGCGTGAAATCAACTCCGTTAACGATAATCCGTTGATCGATGTTTCGAGGAACAAGGCG 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1287 GAGCGTGAAATCAACTCCGTTAACGATAATCCGTTGATCGATGTTTCGAGGAACAAGGCG 1346
Query 1206 ATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTCTATGGATAACACGAGATTG 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1347 ATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTCTATGGATAACACGAGATTG 1406
Query 1266 GCGATTGCTGCGATTGGGAAGCTTATGTTTGCTCAATTCTCTGAGCTTGTTAATGATTTC 1325
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCGATTGCTGCGATTGGGAAGCTAATGTTTGCTCAATTCTCTGAGCTTGTTAATGATTTC 1466
Query 1326 TACAACAATGGACTTCCTTCGAATCTAACAGCTTCGAGTAATCCAAGTTTGGATTATGGA 1385
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1467 TACAACAATGGACTTCCTTCGAATCTAACTGCTTCGAGTAATCCAAGTTTGGATTATGGA 1526
Query 1386 TTCAAAGGAGCAGAGATTGCTATGGCTTCTTATTGCTCTGAGCTTCAATACTTGGCTAAT 1445
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1527 TTCAAAGGAGCAGAGATTGCTATGGCTTCTTATTGTTCTGAGCTTCAATACTTGGCTAAT 1586
Query 1446 CCAGTCACAAGCCATGTTCAATCAGCTGAACAACATAATCAAGATGTGAATTCTCTTGGA 1505
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1587 CCAGTCACAAGCCATGTTCAATCAGCTGAGCAACATAATCAAGATGTGAACTCTCTTGGT 1646
Query 1506 TTGATCTCGTCTCGTAAAACCTCTGAAGCTGTCGACATTCTTAAGCTAATGTCAACAACG 1565
|||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct 1647 TTGATCTCGTCTCGTAAAACATCTGAAGCTGTGGATATTCTTAAGCTAATGTCAACAACG 1706
Query 1566 TTCCTTGTGGGGATATGTCAAGCTGTGGATTTGAGACATTTGGAGGAGAATCTGAGACAG 1625
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1707 TTCCTTGTGGGGATATGTCAAGCTGTTGATTTGAGACATTTGGAGGAGAATCTGAGACAA 1766
Query 1626 ACTGTGAAGAACACAGTTTCTCAAGTTGCTAAGAAAGTGTTAACCACTGGAATCAACGGT 1685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1767 ACTGTGAAGAACACAGTTTCTCAAGTTGCTAAGAAAGTGTTAACCACTGGAATCAACGGT 1826
Query 1686 GAGCTACATCCTTCACGGTTCTGTGAGAAAGACTTGCTTAAGGTCGTTGATCGTGAACAA 1745
||| ||||||| ||| |||| || ||||| |||||||||||||| ||||||||||| |||
Sbjct 1827 GAGTTACATCCGTCAAGGTTTTGCGAGAAGGACTTGCTTAAGGTTGTTGATCGTGAGCAA 1886
Query 1746 GTGTTCACGTATGTCGATGATCCGTGTAGCGCAACGTACCCATTGATGCAGAGACTGAGA 1805
|||||||||||||| |||||||| |||||||| |||||||| |||||||||||||| |||
Sbjct 1887 GTGTTCACGTATGTGGATGATCCTTGTAGCGCTACGTACCCGTTGATGCAGAGACTAAGA 1946
Query 1806 CAAGTTATCGTTGATCACGCTTTGTCCAACGGTGAGACTGAGAAGAATGCAGTGACTTCG 1865
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1947 CAAGTTATTGTTGATCACGCTTTGTCCAACGGTGAGACTGAGAAGAATGCAGTGACTTCG 2006
Query 1866 ATCTTTCAAAAGATTGGAGCTTTTGAAGAGGAGCTTAAGGCTGTGCTTCCAAAGGAAGTG 1925
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2007 ATCTTTCAAAAGATTGGAGCTTTTGAAGAGGAGCTTAAGGCTGTGCTTCCAAAGGAAGTT 2066
Query 1926 GAAGCCGCTAGAGCGACTTATGGTAATGGTACTGCGCCGATTCCTAACCGGATTAAGGAA 1985
||||| ||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 2067 GAAGCGGCTAGAGCGGCTTATGGGAATGGAACTGCGCCGATTCCTAACCGGATTAAGGAA 2126
Query 1986 TGTAGGTCGTATCCGTTGTATAGGTTCGTGAGGGAAGAGCTCGGAACGAAGTTGTTGACT 2045
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2127 TGTAGGTCGTATCCGTTGTATAGGTTCGTGAGGGAAGAGCTTGGAACGAAGTTGTTGACT 2186
Query 2046 GGGGAGAAGGTTGTGTCTCCCGGAGAGGAGTTTGATAAGGTCTTCACTGCAATGTGTGAA 2105
|| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 2187 GGAGAAAAGGTTGTGTCTCCGGGAGAGGAGTTTGATAAGGTCTTCACTGCTATGTGTGAA 2246
Query 2106 GGTAAAATTATTGATCCGTTGATGGATTGTCTCAAGGAATGGAACGGAGCTCCGATTCCG 2165
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2247 GGTAAACTTATTGATCCGTTGATGGATTGTCTCAAGGAATGGAACGGAGCTCCGATTCCG 2306
Query 2166 ATTTGCTAAGAGAGAATTCCTCTGTTTCTG 2195
|||||||||||||| |||||||||||||||
Sbjct 2307 ATTTGCTAAGAGAGCATTCCTCTGTTTCTG 2336
> AT2G37040.1 | Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557376-15560363
REVERSE LENGTH=2530
Length=2530
Score = 2095 bits (1134), Expect = 0.0
Identities = 1787/2100 (85%), Gaps = 54/2100 (3%)
Strand=Plus/Plus
Query 120 GCGGATCAAATGAAAGGAAGTCATTTAGATGAAGTGAAGAAG-ATGGTCGAAGAGTACCG 178
||||| ||||||||||| || ||||| |||||||||||| || ||||| | |||| |
Sbjct 250 GCGGAGCAAATGAAAGGTAGCCATTTGGATGAAGTGAAG-AGAATGGTTGCTGAGTTTAG 308
Query 179 G-AGACCAGTTGTGAATCTTGGTGGAGAAACACTGACGATCGGACAAGTTGCGGCGATCT 237
| || |||||||||||||||||||| || || ||||| || |||||||| || |||||||
Sbjct 309 GAAG-CCAGTTGTGAATCTTGGTGGTGAGACTCTGACCATTGGACAAGTGGCTGCGATCT 367
Query 238 CCACCGTAGGCGGCAGCGTTAAGGTTGAGTTAGCGGAGGCTTCAAGAGCCGGTGTCAAAG 297
| || | || ||| || ||||| ||| || ||||| | | ||||||||||| || |
Sbjct 368 CAACTATTGGTAACAGTGTGAAGGTGGAGCTATCGGAGACAGCTAGAGCCGGTGTGAATG 427
Query 298 CTAGCAGTGATTGGGTTATGGAGAGTATGAACAAAGGCACTGACAGTTACGGTGTCACCA 357
|||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| || |
Sbjct 428 CTAGTAGTGATTGGGTTATGGAGAGTATGAACAAAGGCACTGATAGTTATGGTGTTACTA 487
Query 358 CCGGCTTTGGTGCTACTTCTCACCGGAGAACCAAAAACGGCACCGCA-TTACA-AACAGA 415
| || ||||||||||||||||| ||||||||||||||||| |||| || || || ||
Sbjct 488 CTGGTTTTGGTGCTACTTCTCATCGGAGAACCAAAAACGGTGTCGCACTT-CAGAA-GGA 545
Query 416 ACTCATTAGATT-TTTGAACGCCGGAATATTCGGAAACACGAAGGAGACATGTCACACGC 474
||| |||||||| || ||||||||||||||||||| |||||| || ||| | |||||
Sbjct 546 ACTTATTAGATTCCTT-AACGCCGGAATATTCGGAAGCACGAAAGAAACAAGCCACACAT 604
Query 475 TGCCGCAATCCGCCACAAGAGCCGCCATGCTCGTCA-GAGTCAACACTCTTCTCCAAGGA 533
|||| || ||||||||||||||||||||||| || | || |||||||||| |||||||||
Sbjct 605 TGCCACACTCCGCCACAAGAGCCGCCATGCTTGT-ACGAATCAACACTCTCCTCCAAGGA 663
Query 534 TACTCCGGTATCCGATTCGAGATTCTCGAAGCGATTACAAGTCTCCTCAATC-ACAACAT 592
| |||||||||||||| |||||||||||||| ||||| ||| ||||||| | |||||||
Sbjct 664 TTTTCCGGTATCCGATTTGAGATTCTCGAAGCAATTACCAGTTTCCTCAA-CAACAACAT 722
Query 593 CTCTCCTTCACTTCCTCTCCGTGGAACCATAACCGCCTCCGGCGATCTCGTTCCTCTCTC 652
| |||| || || || |||||||| || || ||||||||||| |||||||||||||||||
Sbjct 723 CACTCCATCTCTCCCCCTCCGTGGTACAATCACCGCCTCCGGAGATCTCGTTCCTCTCTC 782
Query 653 CTACATCGCCGGAATTCTAACCGGCCGTCCTAATTCCAAAGCCACCGGTCCCGCCGGTGA 712
||||||||||||| |||| ||||| ||||| ||||||||||| || |||||| ||||||
Sbjct 783 CTACATCGCCGGACTTCTCACCGGTCGTCCCAATTCCAAAGCTACTGGTCCCAACGGTGA 842
Query 713 ATCGCTAACCGCGA-AAGAAGCTTTCGAGAA--AGCCGGAATCAGTTCCGGATTCTTCGA 769
| | |||| || | | ||||||||| | || ||| |||||||| ||||||||||| ||
Sbjct 843 AGCTTTAACAGC-AGAGGAAGCTTTC-A-AATTAGCAGGAATCAGCTCCGGATTCTTTGA 899
Query 770 TCTACAGCCTAAGGAAGGAT-TAGCTCTCGTTAATGGCACGGCGGTTGGATCTGGCATGG 828
||| |||||||||||||| | | || || || ||||||||||||||||||||||| ||||
Sbjct 900 TCTCCAGCCTAAGGAAGG-TCTCGCGCTAGTCAATGGCACGGCGGTTGGATCTGGAATGG 958
Query 829 CGTCGATGGT-TCTATTCGAAGCCAATGTTCAAGCGGTGTTAGCGGAGGTTTTATCAGCG 887
|||| ||||| | |||||||| | ||||||| | || || || ||| |||| || |||
Sbjct 959 CGTCAATGGTGT-TATTCGAAACGAATGTTCTCTCTGTTTTGGCTGAGATTTTGTCGGCG 1017
Query 888 ATTTTCGCGGAGGTTATGAGCGGGAAACCTGAATTCACCGATCATCTGACTCACCG-TTT 946
||||||| ||||| ||||| || || ||||| |||||||||||||| |||||| | ||
Sbjct 1018 GTTTTCGCAGAGGTGATGAGTGGTAAGCCTGAGTTCACCGATCATCTCACTCACAGACTT 1077
Query 947 GAAGCATCATCCCGGACAAATCGAAGCGGCGGCGATAATGGAACATATCCTCGACGGAAG 1006
|| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1078 -AAACATCATCCCGGTCAAATCGAAGCGGCGGCGATAATGGAGCATATCCTCGACGGAAG 1136
Query 1007 CTCATACATGAAATTAGCTCAAAAGCTTCACGAGATGGATCCATTGCAGAAGCCGAAACA 1066
||| ||||||||||||||||| |||||||||||||||||||| || ||||| || |||||
Sbjct 1137 CTCGTACATGAAATTAGCTCAGAAGCTTCACGAGATGGATCCGTTACAGAAACCTAAACA 1196
Query 1067 AGATCGTTACGCTCTTCGTACCTCTCCTCAATGGCTAGGACCTCAAATTGAAGTAATCCG 1126
||||||||||||||||||||| |||||||||||| |||| |||||||| ||||| |||||
Sbjct 1197 AGATCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCAAATCGAAGTGATCCG 1256
Query 1127 TCAAGCTACGAAATCGATTGAGCGTGAAATCAACTCCGTTAACGATAATCCGTTGATCGA 1186
| | || ||||||||||| |||||||| || |||||||| ||||||||||||||||||||
Sbjct 1257 TTACGCAACGAAATCGATCGAGCGTGAGATTAACTCCGTCAACGATAATCCGTTGATCGA 1316
Query 1187 TGTTTCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTC 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 TGTTTCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTC 1376
Query 1247 TATGGATAACACGAGATTGGCGATTGCTGCGATTGGGAAGCTTATGTTTGCTCAATTCTC 1306
||||||||||||||||||||||| || |||||||| || || |||||||||||||||||
Sbjct 1377 AATGGATAACACGAGATTGGCGATAGCAGCGATTGGTAAACTCATGTTTGCTCAATTCTC 1436
Query 1307 TGAGCTTGTTAATGATTTCTACAACAATGGACTT-CCTTCGAATCTAACAGCTTCGAGTA 1365
|||||||| |||||||||||||||||||| || || ||||||||||| |||||||| |
Sbjct 1437 AGAGCTTGTGAATGATTTCTACAACAATGGT-TTACCCTCGAATCTAACCGCTTCGAGGA 1495
Query 1366 ATCCAAGTTTGGATTATGGATTCAAAGGAGCAGAGATTGCTATGGCTTCTTATTGCTCTG 1425
||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| || |
Sbjct 1496 ATCCAAGTTTGGATTATGGATTCAAGGGAGCTGAGATTGCAATGGCTTCTTATTGTTCAG 1555
Query 1426 AGCTTCAATACTTGGCTAATCCAGTCACAAGCCATGTTCAATCAGCTGAACAACATAATC 1485
||||||||||||| |||||||| || || ||||||||||||||||| || |||||||| |
Sbjct 1556 AGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTCAATCAGCAGAGCAACATAACC 1615
Query 1486 AAGATGTGAATTCTCTTGG-ATTGATCTCGTCTCGTAAAACCTCTGAAGCTGTCGACATT 1544
||||||| || ||| |||| | | ||||||||||| ||||| ||||||||||| || |||
Sbjct 1616 AAGATGTCAACTCT-TTGGGACTAATCTCGTCTCGCAAAACTTCTGAAGCTGTTGATATT 1674
Query 1545 CTTAAGCTAATGTCAACAACGTTCCTTGTGGGGATATGTCAAGCTGTGGATTTGAGACAT 1604
|| ||||| ||||||||||||||||| || | ||| ||||||||||||||||||||||||
Sbjct 1675 CTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGTGGATTTGAGACAT 1734
Query 1605 TTGGAGGAGAATCTGAGACAGACTGTGAAGAACACAGTTTCTCAAGTTGCTAAGAAAGTG 1664
|||||||||||| |||||||||||||||||||||| || |||||||| || ||||||||
Sbjct 1735 TTGGAGGAGAATTTGAGACAGACTGTGAAGAACACTGTCTCTCAAGTGGCGAAGAAAGTT 1794
Query 1665 -TTAACCACTGGAATCAACGGTGAGCTACATCCTTCACGGTTCTGTGAGAAAG-ACTTGC 1722
||| | |||||| |||| |||||||| |||||||| || ||||| || |||| | || |
Sbjct 1795 CTTA-CTACTGGAGTCAATGGTGAGCTTCATCCTTCTCGCTTCTGCGA-AAAGGATTTAC 1852
Query 1723 TTAAGGTCGTTGATCGTGAACAAGTGTTCACGTATGTCG-ATGATCCGTGTAGCGCAACG 1781
| || || || || ||||||||||| | ||| || | || ||||||| ||||||||||||
Sbjct 1853 TCAAAGTTGTAGACCGTGAACAAGTCTACACATACG-CGGATGATCCTTGTAGCGCAACG 1911
Query 1782 TACCCATTGATGCAGA-GACTGAGACAAGTTATCGTTGATCACGCTTTG-TCCAACGGTG 1839
||||| ||||| |||| | |||||||||||||| ||||| || |||||| || || ||||
Sbjct 1912 TACCCGTTGATTCAGAAG-CTGAGACAAGTTATTGTTGACCATGCTTTGATC-AATGGTG 1969
Query 1840 AGACTGAGAAGAATGCAGTGACTTCGATCTTTCAAAAGATTGGAGCTTTTGAAGAGGAGC 1899
||| ||||||||||||||||||||| ||||| || |||||||||||||| || |||||||
Sbjct 1970 AGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTCGAGGAGGAGC 2029
Query 1900 TTAAGGCTGTGCTTCC-AAAGGAAGTGGAAGCCGCTAGAGC-GACTTATGGTAATGGTAC 1957
||||||| ||||| || |||| |||||||||| || ||||| | || | | ||| || ||
Sbjct 2030 TTAAGGCAGTGCTACCGAAAG-AAGTGGAAGCAGCAAGAGCAGCCT-ACGATAACGGAAC 2087
Query 1958 -TGCGCCGATTCCTAACCGGATTAAGGAATGTAGGTCGTATCCGTTGTATAGGTTCGTGA 2016
| || | || || ||| |||| |||||||||||||||||||| |||||||| |||||||
Sbjct 2088 AT-CGGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCATTGTATAGATTCGTGA 2146
Query 2017 GGGAAGAGCTCGGAAC-GAAG-TTGTTGACTGGGGAGAAGGTTGT-GTCTCCCGGAGAGG 2073
|||||||||| ||||| || | || ||||| || ||||| || | ||| || ||||| |
Sbjct 2147 GGGAAGAGCTTGGAACAGA-GCTT-TTGACCGGAGAGAAAGT-GACGTCGCCTGGAGAAG 2203
Query 2074 AGTTTGATAAGGTCTTCACTGCAATGTGTGAAGGTAAAATTATTGATCCGTTGATGGATT 2133
|||| || ||||| ||||| || || |||||||||||||| ||||||||| ||||||| |
Sbjct 2204 AGTTCGACAAGGTTTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGAAT 2263
Query 2134 GTCTCAAGGAATGGAACGGAGCTCCGATTCCGATTTGCTAAGAG-AGAATTCCTCTGTTT 2192
||||||| || |||||||||||||| ||||| || || |||||| | | | |||||||||
Sbjct 2264 GTCTCAACGAGTGGAACGGAGCTCCCATTCCAATATGTTAAGAGTATAGT-CCTCTGTTT 2322
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108884982105
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5