BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938385
Length=1255
Score E
Sequences producing significant alignments: (Bits) Value
AT3G54620.1 | Symbols: ATBZIP25, BZO2H4, BZIP25 | basic leucine... 2037 0.0
> AT3G54620.1 | Symbols: ATBZIP25, BZO2H4, BZIP25 | basic leucine
zipper 25 | chr3:20217897-20220410 REVERSE LENGTH=1469
Length=1469
Score = 2037 bits (1103), Expect = 0.0
Identities = 1206/1255 (96%), Gaps = 9/1255 (1%)
Strand=Plus/Plus
Query 4 AGGCGATTGGGTAAGCGATGCACATCGTCTTCTCTGTCGATGATTTGACCGAATCCTTCT 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 53 AGGCGATTGGGTAAGCGATGCACATCGTCTTCTCTGTCGATGATTTGACCGAATCCTTCT 112
Query 64 GGCCTGTTCCCGCTCCGGCGCCGTCTCCGGGATCGTCATCGACTCCGGCACCGACGCAGA 123
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 113 GGCCTGTTCCCGCTCCGGCGCCGTCGCCGGGATCGTCATCGACTCCGTCACCGACGCAGA 172
Query 124 ACGTGGCGGATGGGATGACTCGAAGTCAATCGGAGTGGGCGTTCCACAGGCTTCTCAATG 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 173 ACGTGGCGGATGGGATGACTCGAAGTCAATCGGAGTGGGCGTTCCACAGGCTTATCAATG 232
Query 184 AGTTATCCGGTTCCGATTCGAGCCCTACGACTAACGCAATCGAGAGATCACCTCCACCGG 243
|||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 233 AGTTGTCTGGTTCCGATTCGAGCCCTACGACTAACACAATCGAGAGATCACCTCCACCGG 292
Query 244 TTCAGTCTCTTTCGAGATTAGAAGAAACCGTTGACGAAACCGAAGATGTTGTCGAGATTC 303
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 293 TTCAGTCTCTTTCGAGATTAGAAGAAACCGTTGACGAAACCGAAGATGTTGTTGAGATTC 352
Query 304 AGAAACCGCAGAATCATCGACGGCTTCCTGCGGATGATCAAGGGAAGAATCGGACTCGTC 363
||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||
Sbjct 353 AGAAACCGCAGAATCATCGACGGCTCCCTGTTGATGATCAAGGGAAGAATCGGAATCGTG 412
Query 364 CTCCGTCGTCTGATCC-GTTGGATTCTTCAGCTGCTGGGGTTGTTGATCCTAATCAGTAT 422
|||||||||||||||| ||| |||||||||||| ||| |||||||||||||||||||||
Sbjct 413 CTCCGTCGTCTGATCCGGTT-GATTCTTCAGCTCCTGTTGTTGTTGATCCTAATCAGTAT 471
Query 423 CATGCGATTCTTAAAAGCAAGCTCGAGCTTGCTTGCGCTGCTGTTGCTCGTCGTGTGGGA 482
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 472 CATGCGATTCTTAAGAGCAAGCTCGAGCTTGCTTGCGCTGCTGTTGCTCGTCGTGTGGGA 531
Query 483 ACTGTGAAACCGGAAGATTCAAGTGCTTCAGCTAGCAATCAAAAGCAAGCTCAAGGCTCC 542
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 532 ACTGTGAAACCGGAAGATTCGAGTGCTTCAGCTAGCAATCAAAAACAAGCTCAAGGCTCC 591
Query 543 ATTGTGGCACAAACCTCACCTGCTGCTTCATCTGTTAGATTTTCTCCCACAACAAGCACG 602
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 592 ATTGTGGCACAAACCTCACCTGGTGCTTCATCTGTTAGATTTTCTCCCACAACAAGCACG 651
Query 603 CAAAAGAAACCAGATGTTCCAGCCAGACAAACTACCAGTATTTCATCAAGAGATGATTCT 662
||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 652 CAAAAGAAACCTGATGTTCCAGCCAGACAAACT---AGTATTTCATCACGAGATGATTCT 708
Query 663 GATGACGATGATCTTGATGGAGACGCAGATAATGGCGATCCTACTGATGTGAAGCGTGCT 722
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 709 GATGACGATGATCTTGATGGAGACGCAGATAATGGAGATCCTACTGATGTGAAGCGTGCT 768
Query 723 AGGAGGATGCTCTCAAACCGAGAATCCGCTAGGCGCTCTAGGAGAAGAAAGCAAGAACAA 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 AGGAGGATGCTCTCAAACCGAGAATCCGCTAGGCGCTCTAGGAGAAGAAAGCAAGAACAA 828
Query 783 ATGAATGAATTTGATACGCAGGTAGGCCAATTAAGAGCTGAGCATTCAACTTTAATTAAT 842
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 829 ATGAATGAATTTGATACACAGGTAGGCCAATTAAGAGCCGAGCATTCAACTTTAATTAAT 888
Query 843 CGTCTTAGTGACATGAATCATAAGTATGATGCAGCTGCTGTTGACAACAGAATTTTAAGA 902
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 889 CGTCTTAGTGACATGAATCATAAGTATGATGCAGCTGCTGTTGACAACAGAATTCTAAGA 948
Query 903 GCTGATATCGAAACTTTGAGAACAAAGGTTAAGATGGCAGAGGAAACTGTGAAAAGAGTG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 949 GCTGATATCGAAACTTTGAGAACAAAGGTTAAGATGGCAGAGGAAACTGTGAAAAGAGTG 1008
Query 963 ACAGGAGTGAACCCTTTGCATTGGTCAAGACCAAACATGGGCGTACCATTCAACAACACA 1022
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 1009 ACAGGAGTGAACCCTTTGCATTGGTCAAGACCAAACATGGGCATACCATTCAGCAACACA 1068
Query 1023 CCGAACGCTTCCTCTAGAATTCCGCCAAACTCTAACCACATTTTGAAACCAGCAA-TCCC 1081
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||| | |
Sbjct 1069 CCGAGTGCTTCCTCTAGTATTCCGCCAAACTCTAACCACATTTTGAAACCAGCAAATTC- 1127
Query 1082 AAGTACCACCACCAGTGCCGGTTTAGCATCAAA-TCAGAGAGTAGAGACGGCAAATTTCT 1140
|||||||| ||||||||| ||||||||| |||| ||||||||| ||||||||||||||||
Sbjct 1128 AAGTACCAACACCAGTGCTGGTTTAGCA-CAAAATCAGAGAGTGGAGACGGCAAATTTCT 1186
Query 1141 TGCCGGAACATGTTAACCGTGAAGGCATGCAGAATCCATTTGCTCATGATTCTAATCTGT 1200
|||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1187 TGCCGGAACAGGTGAACCGTGAAGGCATGCAGAATCCATTTGCTCCTGATTCTAATCTGT 1246
Query 1201 ATGAAACCCTACCCCATTGGAATCACAAGCATTAACCATAAGAAGAGTCAATGGT 1255
|||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct 1247 ATGAAACCCTACCCCATTGGAATCACAAGCATTAACCAGAAAAAGAGTCATTGGT 1301
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61696469805
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5