BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938553
Length=1774
Score E
Sequences producing significant alignments: (Bits) Value
AT3G56060.1 | Symbols: | Glucose-methanol-choline (GMC) oxidor... 2713 0.0
AT5G51930.1 | Symbols: | Glucose-methanol-choline (GMC) oxidor... 996 0.0
AT5G51950.1 | Symbols: | Glucose-methanol-choline (GMC) oxidor... 682 0.0
> AT3G56060.1 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase
family protein | chr3:20803133-20806013 REVERSE LENGTH=1959
Length=1959
Score = 2713 bits (1469), Expect = 0.0
Identities = 1669/1767 (94%), Gaps = 8/1767 (0%)
Strand=Plus/Plus
Query 4 TATAATCTTGCTCTCTAATGAATTTCCATAT-TTTCCGATTATTTC-ATATTATCCTCCT 61
||||||||| |||| |||||||||| ||||| ||| ||||| |||| || |||||||| |
Sbjct 14 TATAATCTTCCTCTATAATGAATTTTCATATCTTT-CGATTTTTTCAAT-TTATCCTCGT 71
Query 62 CGCAGTTTTCATCTTCCACGACTCGTGTTATTCCGATGAAGCTGGAAACTATGGATTTAT 121
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 72 CGCAGTTTTCATCTTCCACGACTCGTGTTATTCCGATGAAGCTGGAAACTATAGATTTAT 131
Query 122 GAAAGATGCAACATCAGCACCAAAGTTATCTCACTTCGACTACATAATCATCGGAGGAGG 181
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 132 GAAAGATGCAACATTAGCACCAAAGTTATCTCACTTCGACTACATAATCATCGGAGGAGG 191
Query 182 AACCGCTGGATGTGCATTAGCCGCAACGCTCTCTCAAAACGCAACCGTTTTAGTCCTCGA 241
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 192 AACCGCTGGATGTGCATTAGCCGCAACGCTCTCTCAAAACGCAACCGTTCTAGTCCTCGA 251
Query 242 ACGCGGCGGTTCCCCTTATGACAACCCAACGGCCTCAGACATAA-ACAACTTCGCGAACA 300
|||||| ||||||||||| ||| | ||| |||| ||||||| | |||||||| ||||
Sbjct 252 ACGCGGAGGTTCCCCTTACGACGATCCAGCGGCAACAGACATCGGA-AACTTCGCAAACA 310
Query 301 CACTCTTGGACATAACTCCAAACTCATGGTCACAGCTATTCATCTCCGAAGACGGCGTTT 360
|||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 311 CACTCTTGAACATAACTCCAAACTCATGGTCGCAGCTTTTCATCTCCGAAGACGGCGTTT 370
Query 361 TCAACTCACGCGCTCGTGTACTAGGTGGAGGCACGGTCATAAACGCAGGGTTCTACTCAC 420
|||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 371 TCAACTCACGCGCTCGTGTACTCGGTGGAGGCACAGTCATAAACGCAGGATTCTACTCAC 430
Query 421 GTGCGGAAGAAGATTTCGTGGCGGAAGCAGGATGGGAGAGAGATGAGGTCGAAGCGGCTT 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 431 GTGCGGAAGAAGATTTCGTGGCGGAAGCAGGATGGGAGAGAGACGAGGTCGAAGCGGCTT 490
Query 481 ACGAGTGGGTCGAGAAGAAAGTGGTTTTTGAACCACCGGTTAAGGGATGGCAATCGGCGT 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 491 ACGAGTGGGTCGAGAAGAAAGTGGTTTTTGAACCACCGGTTAACAAATGGCAATCAGCGT 550
Query 541 TTAGAGATGGACTTTTGGAAGCTGGTGTGAGTCCGTACAATGGTTTCACGTACGAACATA 600
|| ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 551 TTCGAGATGGGCTTTTGGAAGCTGGTGTGACTCCATACAATGGTTTCACGTACGAACATA 610
Query 601 TCGTTGGGACGAAGTTTGGTGGTACGATATTTGACCCGGATGGTCATAGACACACGGCGG 660
|||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 611 TCGTTGGGACTAAATTTGGTGGTACGATATTTGACCGGGATGGTCATAGACACACGGCGG 670
Query 661 CGAATTTGTTGGAGTATGCTAATCCGAACACGATTGTTGTCTACTTGCATGCTTCTGTCC 720
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 671 CGAATTTGTTGGAGTATGCTAATCCGAACATGATAGTTGTCTACTTGCATGCTTCTGTCC 730
Query 721 ATAAGATCCTCTTCACTAATAAAGGTAACCAGAGGCCCAAAGCATATGGAGTGATATTTC 780
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct 731 ATAAGATCCTCTTCACTATTAAAGGTAACCAGAGGCCCAAAGCATATGGGGTGATATTTC 790
Query 781 AGGATGCAAATGGAGTGTCCTACAAGGCAGAATTGGCAACGCAAGACTCAATAATGAGTG 840
||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 791 TGGACGCAAATGGAGTGTCCTACAAGGCAGAATTGGCAACGCAAGACTCGACAATGAGTG 850
Query 841 AGGTGATCTTATCGGCAGGTGCCATCGCGAGCCCGCAACTATTGATGCTAAGTGGTGTGG 900
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 851 AGGTGATCTTATCAGCAGGTGCCATCGCGAGCCCTCAACTATTGATGCTAAGTGGTGTGG 910
Query 901 GCCCTGCGGCTCATCTTGCAGCCTATGGGGTGAATCCGGTCATCGTAGATCAACCCATGG 960
|||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||
Sbjct 911 GCCCTGCGGCTCATCTTGCAGCCTATAGAGTGAACCCGGTCATCGTAGATCAACCCATGG 970
Query 961 TGGGGCAAGGGATGAGTGACAACCCGATGAATCCGGTTTTCATCCCTTCTCCTGAGCCCG 1020
|||| ||||||||| |||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct 971 TGGGCCAAGGGATGGGTGATAACCCGATGAATCCGGTTTTTATCCCTTCTCCTGAACCCG 1030
Query 1021 TAGAAGTGTCTCTTGTACAAGCCGTTGGAATCACCAAGTTTGGTAGTTACATTGAAGGTG 1080
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1031 TAGAAGTGTCTCTTGTACAAGCCGTAGGAATCACCAAGTTTGGTAGTTACATTGAAGGTG 1090
Query 1081 GAAGTGCCTTGAGTGTCTCTATTAGTTTGACTCGTAGCTTCTTCGATGGTGTTTTGAAGC 1140
|||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1091 GAAGTGCCTTAAGTCTCTCTATTAGTTTGACCCGTAGCTTCTTCGATGGTGTTTTGAATC 1150
Query 1141 TTCTTGAAAAGACAAAA-TTACCTACCCAATCCATCTCAAAGTTTTTCAAAACTTTGGAT 1199
||||| ||||||||||| || |||||||||||||||||||||||||||||| ||||||||
Sbjct 1151 TTCTTAAAAAGACAAAACTT-CCTACCCAATCCATCTCAAAGTTTTTCAAATCTTTGGAT 1209
Query 1200 CTTACCTTGAACGTGACAACAAAAGCGGGTGTGATCATCCAAAAAGCGAATGGACCGCTC 1259
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 1210 CTTACCTTGAACGTGACTACAAAAGCGGGTGTGATCATCCAAAAAGTGAATGGACCGCTC 1269
Query 1260 TCGAGAGGTCATTTGGAGTTGCGGAACACGAATCCAGATGATAACCCTTCAGTGACATTC 1319
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1270 TCGAGAGGTCACTTGGAGTTGCGGAATACGAATCCAGATGATAACCCTTCAGTGACATTC 1329
Query 1320 AACTACTATAAGGATCCAGAGGATTTGAACAAGTGTGTTGAAGGACTTAGTACCATTATT 1379
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1330 AACTACTTTAAGGATCCAGAGGATTTGAACAAGTGTGTTGAAGGACTTAGTACCATTATT 1389
Query 1380 AAAGTGATAGATTCGAAGGGATACTCCAAGTACAAGTACCCTGCACCGAGTGCGCGCGGA 1439
|||||||||||||||||||||||||||||||||||||||||| | ||||||| || |||
Sbjct 1390 AAAGTGATAGATTCGAAGGGATACTCCAAGTACAAGTACCCTTTAGCGAGTGCACGTGGA 1449
Query 1440 CTACTAAATCTCATTCTTGCCCTTCCCACCAATCTGAGGCCAAGACACATCACTTCAACG 1499
|||||||||||||||||||| |||||||| ||| | |||||||||||||| |||||||||
Sbjct 1450 CTACTAAATCTCATTCTTGCTCTTCCCACTAATTTAAGGCCAAGACACATAACTTCAACG 1509
Query 1500 TTCGACTTGCAGCAGTATTGTATTGATACCGTGATGACTATTTATCATTACCATGGAGGT 1559
|| || ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1510 TTTGATTTGGAGCAGTATTGTATCGATACCGTGATGACTATTTATCATTACCATGGAGGT 1569
Query 1560 TGTCAAGTTGGAAAAGTGGTCGACAACAATTACAAAGTATTAGGGATTGATGCTTTGAGG 1619
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1570 TGTCAAGTTGGAAAAGTGGTCGACAACAATTACAAAGTATTAGGGGTTGATGCTTTGAGG 1629
Query 1620 GTCATCGATGGATCCACGTTTCTCAAATCTCCAGGGACTAATCCCCAGGCCACGATCATG 1679
||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||
Sbjct 1630 ATCATCGATGGATCCACGTTTCTCAAGTCTCCGGGGACTAATCCACAGGCCACAATCATG 1689
Query 1680 ATGCTCGGAAGGTATATGGGGCAGAAGATTCTTCGAGAGAGGATGGCTTTCCAAGGGAAA 1739
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 1690 ATGCTCGGAAGATATATGGGGCAGAAGATTCTTCGAGAGAGGATGGCTTTCCGAGGAAAA 1749
Query 1740 GAAGAAGAAACATGAGATTTCTAAGTA 1766
|| ||||||||||||||||||||||||
Sbjct 1750 GAGGAAGAAACATGAGATTTCTAAGTA 1776
> AT5G51930.1 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase
family protein | chr5:21101123-21103568 FORWARD LENGTH=1749
Length=1749
Score = 996 bits (539), Expect = 0.0
Identities = 1301/1652 (79%), Gaps = 120/1652 (7%)
Strand=Plus/Plus
Query 98 TGAAGCTGGAAACTATGGATTTATGAAAGATGCAACATCAGCACCAAAGTTAT-CTCA-C 155
|||||||||| |||| |||||||||||||||||||| ||||||||| || || |
Sbjct 161 TGAAGCTGGAGACTA--CATTTATGAAAGATGCAACATTGGCACCAAAG-AATGCT-AGT 216
Query 156 TTCGACTACATAATCATCGGAGGAGGAACCGCTGGATGTGCATTAGCCGCAACGCTCTCT 215
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 217 TTCGACTACATAATCATCGGAGGAGGAACCGCAGGTTGTGCATTAGCCGCAACGCTCTCT 276
Query 216 CAAAACGCAACCGTTTTAGTCCTCGAACGCGGCGGTTCCCCTTATGACAACCCAACGGCC 275
|||||||| | |||||| || || ||||||||||| || || ||||| ||||| ||||||
Sbjct 277 CAAAACGCCAGCGTTTTGGTTCTTGAACGCGGCGGGTCGCCATATGAGAACCCCACGGCC 336
Query 276 TCAGACATAAACAACTTCG-CGAACACACTCTTGGACATA-ACTCCAAACTCATGGTCAC 333
| || || ||||| || | ||||||||||| ||| | || |||||||||||||| |
Sbjct 337 ACTGATATGGGCAACTCCGTC-AACACACTCTTAAACA-ACACACCAAACTCATGGTCGC 394
Query 334 AGCTATTCATCTCCGAAGACGGCGTTTTCAACTCACGCG-CT-CGTGTACTAGGTGGAGG 391
|||| |||||||||||||||||||||| |||| ||||| | ||||| || ||||||||
Sbjct 395 AGCTTTTCATCTCCGAAGACGGCGTTTACAAC--ACGCGGCCACGTGTCCTCGGTGGAGG 452
Query 392 CACGGTCATAAACGCAGGGTTCTACTCACGTGCGGAAGAA-GATTTCGTGGCGGAAGCAG 450
|||| ||||||| ||| |||||||| ||||||| || |||| ||||| |||||| |
Sbjct 453 GTCGGTGATAAACGGAGGATTCTACTCGCGTGCGGGC-AATGATTACGTGGAGGAAGCTG 511
Query 451 -GATGGGAGA-GAGATGAGGTCGAAGCGGCTTACGAGTGGGTCGAGAAGAAAGTGGTTTT 508
| ||||||| | || || || ||||| |||||||||||||||||||||||| | || ||
Sbjct 512 AG-TGGGAGATG-GAAGAAGTGGAAGCTGCTTACGAGTGGGTCGAGAAGAAACTTGTGTT 569
Query 509 TGAACCACCGGTTAAGGGA-TGGCAATCGGCGTTTAGAGATGGACTTTTGGAAGCTGGTG 567
|| |||| || || || |||||| |||||||| |||||| ||| |||| ||||| |
Sbjct 570 CGAGCCACAAGT-AATAGAATGGCAAAAGGCGTTTAAAGATGGGCTTCTGGAGGCTGGAG 628
Query 568 TGAGTCCGTACAATGGTTTCACGTACGAACATATCGTTGGG-ACGAAGTTTGGTGGTACG 626
| |||| |||| |||||||||||||| |||||| | || || ||| | ||||||||
Sbjct 629 AGTCTCCGGACAACGGTTTCACGTACGATCATATC-TACGGCACTAAGATCGGTGGTACA 687
Query 627 ATATTTGACCCG-GATGGTCATAGACACACGGCGGCGAATTTGTTGGAGTATGCTAATCC 685
|| ||||||| | | |||||||||||| || ||||||||| |||| ||||||||||||||
Sbjct 688 ATCTTTGACC-GTGCTGGTCATAGACATACCGCGGCGAATCTGTTAGAGTATGCTAATCC 746
Query 686 GAACACG-ATTGTTGTCTACTTGCATGCTTCTGTCCATAA-GATCCTCTTCACTAATAAA 743
||| || |||||||| ||||||||||||||||| || || | |||||||||| |
Sbjct 747 CAAC-CGGATTGTTGTTTACTTGCATGCTTCTGTTCACAAAG-TCCTCTTCACCA----- 799
Query 744 GGTAACCAGAGGCCCAAAGCATATGGAGTGATATTTCAGGATGCAAATGGAGTGT-CCTA 802
|| || || | |||| |||| ||||| |||||||||||||||||| || |
Sbjct 800 -----CC-GAAGC-----G--TATGAAGTGCTATTTGAGGATGCAAATGGAGTGTTCC-A 845
Query 803 CAAGGCAGAAT-TGGCAACGCAAGACTCAAT-AATGAGTGAGGTGATCTTATCGGCAGGT 860
||||||| ||| | |||| ||| | || || || || ||||||| || || ||
Sbjct 846 CAAGGCA-AATCTAGCAAAT-AAGGC--AACGAACGA---AG-TGATCTTGTCAGCTGGA 897
Query 861 GCCATCGCG-AGCCCGCAACTATTGATGCTAAGTGGTGTGGGCCCTGCGGCTC-ATCTTG 918
||| | | | ||||| |||||||| ||| | ||||| || || ||||| | || ||||||
Sbjct 898 GCCCTGG-GTAGCCCACAACTATTAATGTTGAGTGGAGTAGGTCCTGCCG-TCCATCTTG 955
Query 919 CAGCCT-ATGGGGTGAATCCGGTCATCGTAGATCAACCCATGGTGGGGCAAGGGATGAG- 976
|| || | || ||||| || || || ||||||| |||||||| ||||| |||||| |
Sbjct 956 -AGGCTCACGGCGTGAACCCACTCGTCCTAGATCAGCCCATGGTTGGGCAGGGGATG-GC 1013
Query 977 TGACAA-CCCGATGAA-TCCGGTTTTCATCCCTTCTCCTGAGCCCGTAGAAGTGTCTCTT 1034
||| || ||| ||||| | | | ||| ||||||||| | || |||||| | || ||
Sbjct 1014 TGATAATCCC-ATGAACTTTG-TAGCCATTCCTTCTCCTCAACCAGTAGAACTATCCCTC 1071
Query 1035 GTACAAGCCGTTGGAATCACCAAGTTTGGTAGTTACATTGAAGGTGGAAGTGCCTTGAGT 1094
||||||| ||||| ||||| ||||||| |||||||||||||||| ||||| |||||||
Sbjct 1072 ATACAAGCTGTTGGGATCACAAAGTTTGATAGTTACATTGAAGGTCTAAGTGGCTTGAGT 1131
Query 1095 GTCTCTATTAGTT-TGACTCGTAGCTTCTTCGATGGTGTTTTGAAGCTTCTT----GA-A 1148
||||| || | | | |||||||| || ||||||||||||||||| ||| || || |
Sbjct 1132 CTCTCTTTT-GATATAACTCGTAGGTTTTTCGATGGTGTTTTGAATCTT-TTAAACGAGA 1189
Query 1149 -AAGACA-A--A-AT-TA-------CCT-ACCCAATCCATCT-CAAAGT--TTTTCAAAA 1191
||| || | | || || ||| ||||||||||| | || || |||| ||||
Sbjct 1190 CAAGTCATACTACATCTAGGAAAATCCTGACCCAATCCAT-TGCA--GTCCTTTT-AAAA 1245
Query 1192 -CTTTGGATCTTACCTTG-AACGTGACAACAAAAGCGGGTGTGATCATCCAAAAAG-CGA 1248
|||| ||| ||| ||| || |||| | || | |||| ||||| | ||||||| |||
Sbjct 1246 TCTTTTGATGTTAAATTGGAA-GTGAGGATGAATGGGGGTTTGATCTTTCAAAAAGTCGA 1304
Query 1249 ATGGACCG-CTCTCGAGAGGTCATTTGGAGTTGCGGAACACGAATCCAGATG-ATAACCC 1306
||||||| | ||| | ||| ||| || || | ||||||||||| ||| | | |||| ||
Sbjct 1305 -TGGACCGGC-CTCAAAAGGACATATGAAGCTACGGAACACGAACCCA-AGGGATAATCC 1361
Query 1307 TTCAGTGACATTCAACTACTAT-AAGGATCCAGAGGATTTGAACAAGTGTGTTGAAGGAC 1365
|||||||||||||||||||||| ||| | |||||||||||||||||||||||| |||| |
Sbjct 1362 TTCAGTGACATTCAACTACTATCAAGAA-CCAGAGGATTTGAACAAGTGTGTTAAAGGGC 1420
Query 1366 TTAGTACCATTATTA-AAGTGATAGATTCGAAGGGATACTCCAAGTACAAGTACCCTGCA 1424
||| |||||||||| || ||||| |||| || | | ||||||||||||||| || |
Sbjct 1421 TTAACACCATTATTAGAA-TGATAAATTCCAAAGCTTTCTCCAAGTACAAGTATCCGGGT 1479
Query 1425 CCGA-GTGCGCGCGGACTACTAAATCTCATTCTTG-CCCTTCCCACCAATCTGAGGCCAA 1482
|| | || || | ||| || |||||||| ||| ||||||||| |||| |||||||||
Sbjct 1480 GTGACG-GCACGTGAACTGCTCAATCTCATG-TTGGCCCTTCCCATCAATTTGAGGCCAA 1537
Query 1483 GACACATCACTTCAACGTTCGACTTGCAGCAGTATTGTATTGATACCGTGATGACTATTT 1542
| ||| | || ||| ||||| ||||| |||||| ||| || || ||||||| || | |||
Sbjct 1538 GGCACGTGACCTCAGCGTTCAACTTGAAGCAGTTTTGCATCGACACCGTGACGAGTGTTT 1597
Query 1543 ATCATTACCATGGAGGTTGTCAAGTTGGAAAAGTGGTCGACAACAATTACAAAGTATTAG 1602
||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 1598 GGCATTACCATGGAGGTTGCCAAGTTGGAAAAGTGGTTGACAAGAATTACAAAGTCTTAG 1657
Query 1603 GGATTGATG-CTTTGAGGGTCATCGATGGATCCACGTTTCTCAAATCTCCAGGGACTAAT 1661
| || |||| ||| |||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct 1658 GCATAGATGGCTTA-AGGGTCATCGATGGATCCACATTTCTCAAGTCTCCCGGGACTAAT 1716
Query 1662 CCCCAGGCCACGATCATGATGCTCGGAAGGTA 1693
|| || |||||| |||||||||| ||||||||
Sbjct 1717 CCTCAAGCCACGGTCATGATGCTTGGAAGGTA 1748
> AT5G51950.1 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase
family protein | chr5:21105909-21108605 REVERSE LENGTH=1991
Length=1991
Score = 682 bits (369), Expect = 0.0
Identities = 859/1091 (79%), Gaps = 52/1091 (5%)
Strand=Plus/Plus
Query 71 CATCTTCCACGACTCGTGTTATTCC-GATGAAGCTGGAAACTATGGATTTATGAAAGATG 129
||||||||| | |||||||| ||| ||| ||||||| | || | |||||||||||||
Sbjct 97 CATCTTCCATGCCTCGTGTT-CTCCAGATAAAGCTGGCTATTACAGTTTTATGAAAGATG 155
Query 130 CAACATCAGCACCAAAGTTATCTCACTTCGACTACATAATCATCGGAGGAGGAACCGCTG 189
|||||| |||||||| ||| ||| || || |||||||||||||||||||| || | |
Sbjct 156 CAACATTAGCACCAATGTTCGCTCGGTTTGATTACATAATCATCGGAGGAGGGACTTCGG 215
Query 190 GATGTGCATTAGCCGCAACGCTCTCTCAAAACGCAACCGTTTTAGTCCTCGAACGCGGCG 249
| || || |||||||| ||||| ||||||||||| | |||||| || || |||||||| |
Sbjct 216 GTTGCGCGTTAGCCGCGACGCTATCTCAAAACGCTAGCGTTTTGGTTCTTGAACGCGGTG 275
Query 250 GTTC-CCCTTATGACAACCCAACGGCCTCAGACAT-AAACAACTTCGCGAACACACTCTT 307
|| | ||| || ||||| || ||||| |||| || || ||||| || | ||||||||
Sbjct 276 GTGCTCCC-TACGACAATCCTACGGCAACAGATATCGAA-AACTTTGCCACCACACTCTC 333
Query 308 GGACATAACTCC-AAACTCATGGTCACAGCTATTCATCTCCGAAGACGGCGTTTTCAACT 366
||| | | || ||| || ||||| || || || |||||||| |||||||||| ||||
Sbjct 334 AAACACATCACCGAAA-TCTTGGTCGCAACTTTTTATCTCCGAGGACGGCGTTTACAACA 392
Query 367 CACGCGCTCGTGTACTAGGTGGAGGCACGGTCATAAACGCAGGGTTCTACTCACGTGCGG 426
| || || || || || ||||| ||| | || ||||||| ||||||||| |||||||||
Sbjct 393 CTCGTGCACGCGTCCTCGGTGGTGGCTCCGTGTTAAACGCCGGGTTCTACACACGTGCGG 452
Query 427 AAGAAGATTTCGTGGCGGAAGCA-GGA-TGGGAGAGAGATGAGGTCGAAGCGGCTTACGA 484
||| || | |||| || || | || ||| ||| ||||| || ||||| ||||||||
Sbjct 453 GAGATGAGTACGTGAAGG-AG-ACTGAGTGGAAGACTGATGAAGTGGAAGCTGCTTACGA 510
Query 485 GTGGGTCGAGAAGAAAGTGGTTTTTGAACCACCGGTTAAGGGATGGCAATCGGCGTTTAG 544
|||||||||||||||||||| ||| |||| |||||| |||||||||| |||||||||
Sbjct 511 GTGGGTCGAGAAGAAAGTGGCGTTTCAACCGCCGGTTCTGGGATGGCAAACGGCGTTTAA 570
Query 545 AGATGGACTTTTGGAAGCTGGTGTGAGTCCGTACAATGGTTTCACGTACGAACATATCGT 604
|||||| |||||||| ||||||| | ||| ||||||||||||||||| || |||||| |
Sbjct 571 AGATGGGCTTTTGGAGGCTGGTGAGTTTCCTTACAATGGTTTCACGTATGATCATATC-T 629
Query 605 -TGGGACGAAGTTTGGTGGTACGATATTTGACCCG-GATGGTCATAGACACACGGCGGC- 661
|||||| ||| | ||||||||||| ||||||| | | |||||||||||||||||| ||
Sbjct 630 ATGGGACTAAGATCGGTGGTACGATCTTTGACC-GTGCTGGTCATAGACACACGGCCGCT 688
Query 662 GAATTTGTTGGAGTATGCTAATCCGAACA-CGATTGTTGTCTACTTGCATGCTTCTGTCC 720
|| ||||||||| |||||||||||| || | |||||||||||||||||||| ||||| |
Sbjct 689 GA-TTTGTTGGAATATGCTAATCCGGGCAAC-ATTGTTGTCTACTTGCATGCCTCTGTTC 746
Query 721 ATAAGATCCTCTTCACTAATAAAGGTAA--CCAGAGGCCCAAAGCATATGGAGTGATATT 778
| |||||||||||||| | ||||| || ||| ||||| |||||||| |||||||||||
Sbjct 747 ACAAGATCCTCTTCACCACCAAAGG-AAGGCCA-AGGCCAAAAGCATACGGAGTGATATT 804
Query 779 TCAGGATGCAAATGGAGTGTC-CTACAAGGCAGAATTGGCAACGCAAGACT-CAATAATG 836
||| || || || ||||||| | |||||||||| || | | | |||| | |||| |
Sbjct 805 TCAAGACGCGAACGGAGTGTTAC-ACAAGGCAGAGTTAG-A--G-AAGAATTCAATGA-- 857
Query 837 AGTGAGGTGATCTTATCGGCAGGTGCCATCGCGAGCCCGCAACTATTGATGCTAAGTGGT 896
| |||||||| || || || || || || | |||||||||| | |||||||| || ||
Sbjct 858 AC-GAGGTGATTTTGTCCGCGGGGGCGATTGGGAGCCCGCAATTGTTGATGCTGAGCGGC 916
Query 897 GTGGG-CCCTGCGGCTCATCTTGCAGC-CTATGGGGTGAATCCGGTCATCGTAGATCAAC 954
| || ||| || |||||||| || || | | ||| | || ||| | || ||||||| |
Sbjct 917 ATAGGTCCC-GCAGCTCATCTCGCGGCTC-ACGGGATTAAACCGTTGGTCTTAGATCATC 974
Query 955 CCATGGTGGGGCAAGGGATGAGTGACAA-CCCGATGAAT-CCGGT-TTTCATCCCTTCTC 1011
| ||||| |||||||| ||| | || || ||| |||||| || | ||| || |||||||
Sbjct 975 CGATGGTAGGGCAAGGTATGGGAGATAATCCC-ATGAATGCCA-TATTT-ATTCCTTCTC 1031
Query 1012 CTGA-GCCCGTAGAAGTGTCTCTTGTACAAGCCGTTGGAATCACCAAGTTTGGTAGTTAC 1070
|| | |||||| || || ||||| |||||| |||||||||||| ||||||| ||||||
Sbjct 1032 CT-ACGCCCGTGGAGGTTTCTCTAATACAAGTCGTTGGAATCACAAAGTTTGAAAGTTAC 1090
Query 1071 ATTGAAGGTGGAAGTGCCT-TGAGTGT-CTC-TATTAGTTTGACTCGTAGCTTCTTCGAT 1127
|| ||||| | ||||| | | | | | ||| ||| |||| ||||||||| || ||||||
Sbjct 1091 ATAGAAGGAGCAAGTGG-TGTAA-TCTTCTCATAT-AGTTGGACTCGTAGATTTTTCGAT 1147
Query 1128 GGTGTTTTGAA 1138
|||||||||||
Sbjct 1148 GGTGTTTTGAA 1158
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87750552660
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5