BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg938582

Length=304
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G04430.1 | Symbols:  | S-adenosyl-L-methionine-dependent met...  75.0    4e-13


> AT1G04430.1 | Symbols:  | S-adenosyl-L-methionine-dependent methyltransferases 
superfamily protein | chr1:1198118-1201527 
FORWARD LENGTH=2379
Length=2379

 Score = 75.0 bits (40),  Expect = 4e-13
 Identities = 44/46 (96%), Gaps = 0/46 (0%)
 Strand=Plus/Plus

Query  145   ATGTCATCAAAAGTCAAATCAAACACTGTGAGGAACATAATAGACA  190
             |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct  1632  ATGTCATCGAAAGTCAAATCAAACACTGTGAGGAACATAATGGACA  1677



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14074969720


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5