BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938671
Length=1165
Score E
Sequences producing significant alignments: (Bits) Value
AT3G57030.1 | Symbols: | Calcium-dependent phosphotriesterase ... 1792 0.0
> AT3G57030.1 | Symbols: | Calcium-dependent phosphotriesterase
superfamily protein | chr3:21101457-21103293 REVERSE LENGTH=1410
Length=1410
Score = 1792 bits (970), Expect = 0.0
Identities = 1095/1157 (95%), Gaps = 2/1157 (0%)
Strand=Plus/Plus
Query 10 CACCAGTCACCATGACCATGATGATCATTACAGTATTCTTAACCGCGATTGTTGCGGTTC 69
||||| |||||||||||||||||||||||||||| |||||||| | ||||| |||||||
Sbjct 79 CACCAATCACCATGACCATGATGATCATTACAGTGTTCTTAACAGTGATTGCAGCGGTTC 138
Query 70 TCGCAATCCTTGTCAGGACTTCTCAAACCGGTTCTGGTATCTTCGCACCGCCTGAAATCT 129
||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||
Sbjct 139 TCGCAATCCTTGTCAAGAATTCTCAAACCGGTTCTGGCATCTTCGCACCGCCTGAAATCT 198
Query 130 CCGGTTCGCGTGATGTTTTCCCGTCGGCGAAAGTGGTTAACTTAACCGGAGCCTCCGGTC 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 199 CCGGTTCGCGTGATGTTTTCCCGTCGGCGAAAGTGGTTAACTTAACCGGAGCCTCTGGTC 258
Query 190 CGGAGAGTATAGCTTTCGATCCAGCAGGTGAAGGTCCGTACGTTGGTGTCTCCGACGGTC 249
| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 259 CTGAGAGTATAGCTTTCGATCCAGCAGGTGAAGGTCCGTACGTTGGTGTCTCAGATGGTC 318
Query 250 GTGTCTTGAAATGGCGCGGTGAATCGCTTGGATGGTCAGATTTCGCTTACACAGCGTCTA 309
|| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct 319 GTATCTTGAAATGGCGCGGTGAACCGCTTGGATGGTCAGATTTCGCTCACACATCGTCTA 378
Query 310 ATAGGCAGGAGTGTGTTCGTCCATTTGCACCAGAGTTGGAGCATGTGTGTGGAAGGCCAT 369
| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 379 ACAGGCAGGAGTGTGCTCGCCCATTTGCACCAGAGTTGGAGCATGTGTGTGGAAGGCCAT 438
Query 370 TAGGATTGCGGTTCGATAAGAAAACCGGAGATCTCTACATCGCGGATGCATACTTTGGCC 429
|||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 439 TAGGGTTGCGGTTCGATAAGAAAACCGGAGATCTCTACATAGCGGATGCCTACTTTGGCC 498
Query 430 TTCTTGTTGTTGGTCCTGCTGGTGGTTTAGCCAAACCTCTGGTTACTGAAGCCGAGGGGC 489
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 499 TTCTTGTTGTTGGTCCTGCTGGTGGTTTAGCCAAACCTCTGGTTACAGAAGCTGAGGGGC 558
Query 490 AGCCATTTCGTTTCACTAATGATTTAGACATTGATGAGCAGGAAGATGTG-TTATACTTC 548
|||| |||||||||||||||||||| || ||||||||||||||||||||| || |||||
Sbjct 559 AGCCGTTTCGTTTCACTAATGATTTGGATATTGATGAGCAGGAAGATGTGATT-TACTTT 617
Query 549 ACAGATACTAGTGCCAGATTCCAGAGAAGGCAATTCCTGGCTGCCGTTTTGAACGTCGAT 608
|||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||
Sbjct 618 ACAGATACTAGTGCCAGATTCCAGAGAAGGCAATTCTTAGCTGCTGTTTTGAACGTCGAT 677
Query 609 AAGACTGGAAGGTTTATCAAGTATGACAGATCCAGCAAGAAAGCGACAGTCTTACTACGA 668
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| |
Sbjct 678 AAGACTGGAAGGTTTATCAAGTATGATAGATCAAGCAAGAAAGCGACAGTCTTATTACAA 737
Query 669 GGCCTTGCATTTGCAAATGGCGTTGCACTAAGCAAAGACCGGTCTTTTGTATTGGTAGTC 728
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 GGCCTTGCATTTGCAAACGGCGTTGCACTAAGCAAAGACCGGTCTTTTGTATTGGTAGTC 797
Query 729 GAAACAACCACTTGCAAGATCCTAAGGCTTTGGCTCTCTGGTCCAAGTGCGGGAACACAC 788
|||||||| ||||||||||| ||||| ||||||||||||||||||| || |||||||||
Sbjct 798 GAAACAACTACTTGCAAGATTCTAAGACTTTGGCTCTCTGGTCCAAACGCAGGAACACAC 857
Query 789 GAAGTGTTTTCTGAGCTTCCAGGTTTCCCTGACAACATCAGAAGAAACTCGAATGGAGAA 848
|||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 858 CAAGTGTTTGCTGAGCTTCCGGGTTTCCCTGACAACATCAGAAGAAACTCGAATGGAGAA 917
Query 849 TTCTGGGTCGCTTTACACTCAAAGAAAGGTCTTTTCGCGAAACTATCACTCACTCAAACT 908
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 918 TTCTGGGTCGCTTTACACTCAAAGAAAGGTCTTTTCGCGAAACTATCACTTACTCAAACT 977
Query 909 TGGTTCAGAGATTTGGTGCTTAGACTTCCGATCAGTCCCCAGCGCCTGCACTCGCTGTTC 968
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 978 TGGTTCAGGGATTTGGTGCTTAGACTTCCGATCAGTCCCCAACGCCTGCACTCGCTGTTC 1037
Query 969 ACTGGAGGAAGACCTCATGCTACAGCCATAAAGCTGAGTGAATCAGGAAAGGTATTGGAG 1028
|||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1038 ACTGGAGGAATACCTCATGCTACAGCCATAAAGCTGAGTGAATCAGGTAAGGTTTTGGAG 1097
Query 1029 GTACTCGAGGATAAGGAAGGAAAGAGGTTGAGGTTTATAAGTGAAGTGGAAGAGAAAGAT 1088
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1098 GTACTTGAGGATAAGGAAGGAAAGACATTGAGGTTTATAAGTGAAGTGGAAGAGAAAGAC 1157
Query 1089 GGCAAGCTTTGGATTGGTTCTGTTCTCATGCCTTTTCTTGGTGTTTATGATTTGTAGTTT 1148
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 1158 GGCAAGCTTTGGATTGGTTCTGTTCTCGTGCCTTTTCTTGGTGTCTATGATTTGTAGTTT 1217
Query 1149 CCTACATTGCTCTGACT 1165
||||| |||||| ||||
Sbjct 1218 CCTACTTTGCTCAGACT 1234
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57178420755
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5