BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938716
Length=2339
Score E
Sequences producing significant alignments: (Bits) Value
AT3G57420.1 | Symbols: | Protein of unknown function (DUF288) ... 3757 0.0
AT2G41770.1 | Symbols: | Protein of unknown function (DUF288) ... 2220 0.0
> AT3G57420.1 | Symbols: | Protein of unknown function (DUF288)
| chr3:21252419-21255276 REVERSE LENGTH=2645
Length=2645
Score = 3757 bits (2034), Expect = 0.0
Identities = 2239/2340 (96%), Gaps = 5/2340 (0%)
Strand=Plus/Plus
Query 4 TTTAGTGCTTGAATCTGATGTTGGTTCAAGATCGTGTGGCTCCTAAGCCACCAAAATCTC 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 TTTAGTGCTTGAATCTGATGTTGGTTCAAGATCGTGTGGCTCCTAAGCCACCAAAATCTC 204
Query 64 GGATCAGAGAACTTCCTAGTCGGGACCGATTCGCTGAACCCAAAAACCTAGATTTTTCTT 123
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 205 GGATCAGAGAACTTCCTAGTCGGGACCGATTCGCTGAACCCAAAATCCTAGATTTCTCTT 264
Query 124 CATGGGTTTCCGACAATGTCTATAGAATCGTAATCTTCTTCCTCTTCATCGTCACCGTTG 183
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |
Sbjct 265 CATGGGTTTCCGACAATGTCTACAGAATCGTAATCATCTTCCTCTTCATCGTCACCGTCG 324
Query 184 CTGCTTTCTTCTTCCTCTACAACACCACCGACACTGCTTCTCTCCTTTGTTTCCAATCCC 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 325 CTGCTTTCTTCTTCCTCTACAACACCACCGACACTGCTTCTCTCCTCTGTTTCCAATCCC 384
Query 244 AATCAACTCAATCTCTTCAATCTCTCACTCGCCCTCAAATCAACTGGAACTCGATCCAAA 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 385 AATCAACTCAATCTCTTCAATCTCTCACTCGCCCTCAAATCAACTGGAACTCGATCCAAA 444
Query 304 TCGTCTCCGACAAAACCTCACCTTACCCTAGTTTCCGTACAGAGAAATGGATCGTTGTGT 363
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 445 TCGTCTCCGACAAAACCTCACCTTACGCTAGTTTCCGTACAGAGAAATGGATCGTTGTGT 504
Query 364 CGGTGACCAAGTACCCAACAGAGGAGCTCAAGGGTTTGGTCAAAATTAAAGGATGGCAAG 423
||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 505 CGGTGACAAAGCACCCAACAGAGGAGCTCAAAGGTTTGGTCAAGATTAAAGGATGGCAAG 564
Query 424 TTCTAGCGATTGGAAACTCTTTAACACCTAAAGATTGGAATCTCAAAGGTGCGATTTTTC 483
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 565 TTCTAGCGATCGGAAACTCTTTAACACCTAAAGATTGGAATCTCAAAGGTGCGATTTTTC 624
Query 484 TATCTTTAGATGCTCAAGCTGAGCTGAATTACCGGATTTTGGATCATTTGCCTTATGATT 543
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 625 TATCTCTAGATGCTCAAGCTGAGCTTAATTACCGGATTTTGGATCATTTGCCTTATGATT 684
Query 544 CCTTCGTACGCAAAAGTGTCGGTTACTTGTTCGCGATTCAGCATGGTGCAAAGAAGATCT 603
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 685 CCTTCGTACGCAAAAGTGTCGGTTACTTGTTTGCGATCCAGCATGGTGCAAAGAAGATCT 744
Query 604 ACGATGCAGATGATCGTGGTGAAGTGATTGATGGAGATCTTGGGAAACATTTTGATGTAG 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 745 TTGATGCAGATGATCGTGGTGAAGTGATTGATGGAGATCTTGGGAAACATTTTGATGTAG 804
Query 664 AGTTAGTAGGAGAAGACGCTAGGCAAGAACCAATCTTGCAGTATAGTCACGAAAACCCGA 723
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 AGTTAGTTGGAGAAGACGCTAGGCAAGAACCAATCTTACAGTATAGTCACGAAAACCCGA 864
Query 724 ATCGAACTGTGGTGAATCCTTATATCCATTTCGGGCAACGATCAGTTTGGCCTAGAGGTT 783
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 865 ATCGAACTGTGGTGAATCCGTATATCCATTTCGGGCAACGATCGGTTTGGCCTAGAGGTT 924
Query 784 TACCATTAGAGAATGTAGGTGAGATCAATCATGAAGAGTATTACACTGAGGTTTTTGGTG 843
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 TGCCATTAGAGAATGTAGGTGAGATCAATCATGAAGAGTATTACACTGAGGTTTTTGGTG 984
Query 844 GTAAACAGTTTATTCAGCAAGGGATTTCGAACGGTTTACCGGATGTTGATTCTGTGTATT 903
|||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||
Sbjct 985 GTAAACAGTTTATTCAGCAAGGGATTTCCAACGGTTTGCCGGATGTTGATTCCGTGTATT 1044
Query 904 ATTCCACTAGGAAGACGACTTTCGAACCGTTTGATATCAGATTCGATGAGCATTCTCCTA 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1045 ATTCCACTAGGAAGACGACTTTCGAACCGTTTGATATCAGATTCGATGAGCATTCTCCTA 1104
Query 964 AAGTGGCGTTGCCACAAGGTATGATGGTGCCTGTGAATTCGTTCAACACTTTATACCATT 1023
||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct 1105 AAGTGGCGTTGCCTCAAGGTATGATGGTGCCTGTGAATTCGTTTAACACATTGTACCATT 1164
Query 1024 CCTCAGCGTTTTGGGGGTTAATGCTTCCTGTTTCGGTTAGTTCAATGGCTTCGGATGTGA 1083
|||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 1165 CCTCTGCGTTTTGGGGGTTAATGCTTCCTGTTTCGGTTAGTTCCATGGCTTCAGATGTGA 1224
Query 1084 TTAGAGGTTACTGGGGACAAAGGCTTTTATGGGAGCTTGGTGGTTATGTTGCTGTTTATC 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1225 TTAGAGGTTACTGGGGACAAAGGCTTTTATGGGAGCTTGGTGGTTATGTTGCTGTTTATC 1284
Query 1144 CACCAACTGTTCACCGGTATGATCGAGTCGAAGCTTACCCTTTCTCTGATGAGAAAGATC 1203
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1285 CACCAACTGTTCACCGGTATGATAGAGTCGAAGCTTACCCTTTCTCTGATGAGAAAGATC 1344
Query 1204 TCCACGTCAATGTCGGTCGTTTGATCAAATTCTTGCTTGCTTGGAGATCAAATAAGCATA 1263
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1345 TCCATATCAATGTCGGTCGTTTGATCAAATTCTTGCTTGCTTGGAGATCAAATAAGCATA 1404
Query 1264 GGTTCTTCGAGACGATTCTCGATTTGAGCTTTGTTATGGCTGAACAAGGGTTTTGGACAG 1323
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 1405 GGTTCTTCGAGACGATTCTTGATTTGAGCTTTGTTATGGCTGAACAAGGGTTTTGGACTG 1464
Query 1324 AACTCGACGTGAAATTCACAGCTGCTTGGCTCCAGGATTTGCTTATGGTCGGATACCAAC 1383
| || || |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1465 AGCTAGATGTGAAATTCACAGCTGCTTGGCTCCAGGATTTGCTTATGGTCGGATACCAGC 1524
Query 1384 AGCCTCGGTTAATGTCACTTGAGTTGGACCGCCCACGAGCAACCATCGGTCATGGAGATA 1443
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1525 AGCCTCGGTTAATGTCACTTGAGTTGGACCGCCCACGAGCAACCATTGGTCATGGAGATA 1584
Query 1444 GAAAAGAGTTTGTTCCTAGGAAATTGCCTTCAGTTCACCTCGGGGTCGAGGAGATAGGCA 1503
||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct 1585 GAAAAGAGTTTGTTCCTAGGAAATTGCCTTCGGTTCATCTTGGGGTCGAGGAGATAGGCA 1644
Query 1504 CAGTAAGTTCTGAAATTGGGAACTTGATTAAGTGGAGGAAGAATTTTGGGAATGTAGTGC 1563
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1645 CAGTGAGTTCTGAAATTGGGAACTTGATTAAGTGGAGGAAGAATTTTGGGAATGTAGTGC 1704
Query 1564 TTATAATGTTCTGTAACGGACCAGTAGAACGCACCGCTCTTGAATGGAGATTACTTTACG 1623
|||||||||||||||||||||| || ||||| || |||||||||||||| |||||||| |
Sbjct 1705 TTATAATGTTCTGTAACGGACCTGTGGAACGTACTGCTCTTGAATGGAGGTTACTTTATG 1764
Query 1624 GGCGAATATTCAAAACCGTGGTCATTTTGTCCTCTCGGAAAGACTCAGATCTTTACGTCC 1683
|||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 1765 GGCGGATATTCAAAACCGTGGTCATTTTGTCCTCTCGGAAAAACTCAGACCTTTACGTCC 1824
Query 1684 AAGAAGCTAAACTCGATCACATTTACAAGCGGCTACCGAAGATATTTGATCGGTATAGCA 1743
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1825 AAGAAGCTAAACTCGATCACATATACAAGCGGCTACCGAAGATATTTGATCGGTACAGCA 1884
Query 1744 GCGCAGACGGATTTTTGTTTGTTGAAGATGATACAATTCTTAATTACTGGAATTTACTTC 1803
|||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1885 GCGCTGACGGATTTGTGTTTGTTGAAGATGATACAGTTCTTAATTACTGGAATTTACTTC 1944
Query 1804 AAGCCGACAAAACTAAGCTCTGGACTACAGACAAGGTAACGGAGTCATGGACAACAGTGA 1863
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1945 AAGCTGACAAAACCAAGCTCTGGACTACAGACAAGGTAACGGAGTCATGGACAACGGTGA 2004
Query 1864 GAGCAGCTGGGAA-TGCTGATTGGTATTCGGTTCAGGCGGAATTAGTAAAGAAAATTGTC 1922
|| |||| ||||| | | ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2005 GACCAGCCGGGAACT-CGGATTGGTATTCGGTTCAGGCGGAATTAGTCAAGAAAATTGTC 2063
Query 1923 AGTACAATGCCGGTTCATTTCCAAGTCAATTACAAGGAAGCCACAAAGAAGACCGATGAC 1982
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |
Sbjct 2064 AGTACAATGCCGGTTCATTTCCAAGTCAATTACAAGGAAGCCACAAAGAATAGCGATGGC 2123
Query 1983 AAAACCTTTTTGATGTGCAGCTCTGAAGTGTTCTATGTCCCTAAACGCTTTGTCTCGGAC 2042
| || ||| |||||||||||| ||||| |||||||||||||||||||| ||||| |||
Sbjct 2124 ACAAGCTTAACGATGTGCAGCTCGGAAGTTTTCTATGTCCCTAAACGCTTCGTCTCAGAC 2183
Query 2043 TTTACAGATCTTGTTAATCTCGTGGGCGATATGGATTTGCATTACAAAGTGGCTGTGCCT 2102
||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 2184 TTTACAGATCTTGTTAATCTCGTTGGTGATATGGATTTGCATTACAAAGTTGCTGTGCCT 2243
Query 2103 ATGTTCTTCCTATCGATGGATTCGCCTCAGAATTTTGACCCGGTCCTAGGCTCGATGGTT 2162
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 2244 ATGTTCTTCCTATCGATGGATTCGCCTCAGAATTTTGACCCGGTTCTAGGCTCAATGGTA 2303
Query 2163 TACAAGTCGGAACCAGCTTCATTAAACTCTTCTTTGAGTTTGTATTCAGCGGAAGCACCT 2222
|| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2304 TATAAGTCAGAACCAGCTTCGCTAAACTCTTCTTTGAGTTTGTATTCAGCGGAAGCACCT 2363
Query 2223 GCGGTTCATCCTTGGAGCATTTCGAGCGAACAAGATTTCATTAAATTGGTTAGGGAGATG 2282
|| ||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||
Sbjct 2364 GCAGTTCATCCTTGGAGCATCTCGAACGAACAAGATTTCATTAAATTGGTGAGGGAGATG 2423
Query 2283 GCGGAAGGCGATCCGCTTTTGATGGAATTGGTATAAT-A--AGTCAAAACAAGAGTAAGT 2339
|||||||| |||||||| ||||||||||||||||||| | |||||||||||||||||||
Sbjct 2424 GCGGAAGGTGATCCGCTATTGATGGAATTGGTATAATGATGAGTCAAAACAAGAGTAAGT 2483
> AT2G41770.1 | Symbols: | Protein of unknown function (DUF288)
| chr2:17424358-17427282 REVERSE LENGTH=2747
Length=2747
Score = 2220 bits (1202), Expect = 0.0
Identities = 1910/2251 (85%), Gaps = 51/2251 (2%)
Strand=Plus/Plus
Query 90 CGATTC-GCTGAACCCAAAAACCTAGATTTTTCTTCATGGGTT-TCCGACAATGTCTATA 147
|||||| | ||||||||||||| ||||||| || | | |||| || || ||| ||| ||
Sbjct 331 CGATTCAG-TGAACCCAAAAACTTAGATTTCTCGAC-TTGGTTCTCTGAGAATCTCTCTA 388
Query 148 GAATCG-TAATCTTCTTC-CTCTTCATCGTCACCGTTGCT-GCTTTCTTCTTCCTCTACA 204
|||| | | ||||| || ||||| ||||||||| | | | |||||||||||||||||||
Sbjct 389 GAATTGCT-GTCTTC-TCTCTCTTAATCGTCACCATAG-TAGCTTTCTTCTTCCTCTACA 445
Query 205 ACACCACCGACACTGCTTCTCTCCTTTGTTTCCAATCCCAATCAACTCAATCTCTTCAAT 264
|||||||||||||||||||||||||||||||||| || || |||||||||| ||||||||
Sbjct 446 ACACCACCGACACTGCTTCTCTCCTTTGTTTCCAGTCTCAGTCAACTCAATTTCTTCAAT 505
Query 265 CTCTCACTCGCCCTCAAATCAACTGGAACTCGATCCAAATCGTCTCC-GACAAAACCTCA 323
||||| |||||||||||||||| ||||| ||||||| | ||||| || || ||||||||
Sbjct 506 CTCTCTCTCGCCCTCAAATCAAATGGAATTCGATCCCAGTCGTC-CCTGATAAAACCTCC 564
Query 324 CCTTACCCTAGTTTCC-GTACAGAGAAATGGATCGTTGTGTCGGTGACCAAGTACCCAAC 382
|| ||| ||| ||||| | |||||||||||||| ||||||||||| ||||||||||||||
Sbjct 565 CCGTACGCTAATTTCCAG-ACAGAGAAATGGATTGTTGTGTCGGTTACCAAGTACCCAAC 623
Query 383 AGAGGAGCTCAAGGGTTTGGTCAAAATTAAAGGATGGCAAGTTCTAGCGATTGGAAACTC 442
|||||||||||| | ||||| || ||| |||||||| |||||||| |||||||||||
Sbjct 624 TGAGGAGCTCAAGAGCTTGGTGAAGATTCGTGGATGGCAGGTTCTAGCTATTGGAAACTC 683
Query 443 TTTAACACCTAAAGATTGGAATCTCAAAGGTGCGAT-TTTTCTATCTTTAGATGCTCAAG 501
||||| || ||||||| ||| |||||| | || |||| | ||| | ||||||||||
Sbjct 684 GGCGACACCCAAGGATTGGAGTCTTAAAGGTTCCATCTTTT-TGTCTCTCGATGCTCAAG 742
Query 502 CTGAGCTGAATTACCG-GATTTTGGATCATTTGCCTTATGATTCCTTCGTACGCAAAAGT 560
|||| || ||| || | |||| ||||| |||||||||||||| |||||| | || |||
Sbjct 743 CTGAATTGGGTTATCGAG-TTTTAGATCACTTGCCTTATGATTCTTTCGTAAGGAAGAGT 801
Query 561 GTCGGTTACTTGTTCGCGATTCAGCATGGTGCAAAGAAGATCTACGATGCAGATGATCGT 620
|| ||||||||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||
Sbjct 802 GTTGGTTACTTGTTCGCGATCCAGCACGGTGCGAAGAAGATCTATGATGCTGATGATCGT 861
Query 621 GGTGAAGTGATTGATGGAGATCTTGGGAAACATTTTGATGTAGAGTTAGTAGGAGAAGAC 680
||||||||||||||||||||||| || || ||||||||||| |||||||| || |||
Sbjct 862 GGTGAAGTGATTGATGGAGATCTAGGCAAGCATTTTGATGTTGAGTTAGTTGGTCTAGAT 921
Query 681 GCTAGGCAAGAACCAATCTTGCAGTATAGTCACGAAAACCCGAATCGAACTGTGGTGAAT 740
||| ||||||||| || |||||||||||||| || ||||| ||| | |||||||| |||
Sbjct 922 TCTAAGCAAGAACCGATTTTGCAGTATAGTCATGAGAACCCCAATAGGACTGTGGTTAAT 981
Query 741 CCTTATATCCATTTCGGGCAACGATCAGTTTGGCCTAGAGGTTTACCATTAGAGAATGTA 800
|||||||| |||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct 982 CCTTATATTCATTTCGGGCAACGTTCCGTTTGGCCTAGAGGTTTGCCATTAGAGAATGTA 1041
Query 801 GGTGAGATCAATCATGAAGAGTATTACACTGAGGTTTTTGGTGGTAAACAGTTTATTCAG 860
||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1042 GGTGAGATCAATCATGAGGAGTATTACACTGAGGTTTTTGGTGGTAAGCAGTTTATACAG 1101
Query 861 CAAGGGATTTCGAACGGTTTACCGGATGTTGATTCTGTGTATTA-TTCCACTAGGAAGAC 919
||||||||||| ||||||||||||||||||||||| |||| ||| ||| |||||||||||
Sbjct 1102 CAAGGGATTTCTAACGGTTTACCGGATGTTGATTCGGTGTTTTACTTC-ACTAGGAAGAC 1160
Query 920 GACTTTCGAACCGTTTGATATCAGATTCGATGAGCATTCTCCTAAAGTGGCGTTGCCACA 979
|||||| ||| | |||||||| || ||||||||||||||||||||||| || || || ||
Sbjct 1161 GACTTTAGAAGCTTTTGATATTAGGTTCGATGAGCATTCTCCTAAAGTTGCTTTACCTCA 1220
Query 980 AGGTATGATGGTGCCTGTGAATTCGTTCAACACT-TTATACCATTCCTCAGCGTTTTGGG 1038
|||| |||||||||| || |||||||| |||||| || |||||||| ||||| |||||||
Sbjct 1221 AGGTGTGATGGTGCCGGTTAATTCGTTTAACACTCTT-TACCATTCGTCAGCCTTTTGGG 1279
Query 1039 GGTTAATGCTTCCTGTTTCGGTTAGTTCAATGGCTTCGGATGTGATTAGAGGTTACTGGG 1098
|||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||
Sbjct 1280 GGTTAATGCTTCCTGTTTCGGTTAGTTCCATGGCTTCTGATGTGCTGAGAGGTTACTGGG 1339
Query 1099 GACAAAGGCTTTTATGGGAGCTTGGTGGTTATGTTGCTGTTTATCCACCAACTGTTCACC 1158
||||||||||||| ||||||||||||||||||||||||||||||||||| || | |||||
Sbjct 1340 GACAAAGGCTTTTGTGGGAGCTTGGTGGTTATGTTGCTGTTTATCCACCTACAGCTCACC 1399
Query 1159 GGTATGATCGAGTCGAAGCTTACCCTTTCTCT-GATGAGAAAGATCTCCACGTCAATGTC 1217
||| |||| || |||| ||||||||||| | | || ||||| ||||| || || |||||
Sbjct 1400 GGTTTGATAGAATCGAGGCTTACCCTTT-TGTAGAGGAGAAGGATCTTCATGTTAATGTT 1458
Query 1218 GGTCGTTTGATCAAATTCTTGCTTGCTTGGAGATCAAATAAGCATAGGTTCTTCGAGACG 1277
|||||||||||||| ||||| ||||||||||||||| | |||||||| ||||| ||||||
Sbjct 1459 GGTCGTTTGATCAAGTTCTTACTTGCTTGGAGATCAGAGAAGCATAGTTTCTTTGAGACG 1518
Query 1278 ATTCTCGATTTGAGCTTTGTTATGGCTGAACAAGGGTTTTGGACAGAACTCGACGTGAAA 1337
| || ||||||||||||| |||||||||| |||||||||||||||||| || |||||
Sbjct 1519 GTCCTTGATTTGAGCTTTGCTATGGCTGAAGAAGGGTTTTGGACAGAACAGGATTTGAAA 1578
Query 1338 TTCACAGCTGCTTGGCTCCAGGATTTGCTTA-TGGTCGGATACCAACAGCCTCGGTTAAT 1396
||||||||||||||||| ||||||||| || || | || |||||||| || | || ||
Sbjct 1579 TTCACAGCTGCTTGGCTTCAGGATTTGATTGCTGTTGGG-TACCAACAACCGAGATTGAT 1637
Query 1397 GTCACTTGAGTTGGACCGCCCACGAGCAACCATCGGTCATGGAGATAGAAAAGAGTTTGT 1456
||| || || ||||| ||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1638 GTCGCTGGAATTGGATCGCCCGCGAGCAAGTATCGGTCATGGAGATAGAAAAGAGTTTGT 1697
Query 1457 TCCTAGGAAATTGCCTTCAGTTCACCTCGGGGTCGAGGAGA-TAGGCACAGTAAGTTCTG 1515
||| ||||| || ||||| ||||| |||||||| ||||||| | |||||||| || |||
Sbjct 1698 TCCAAGGAAGTTACCTTCGGTTCATCTCGGGGTTGAGGAGACT-GGCACAGTGAGCACTG 1756
Query 1516 AAATTGGGAACTTGATTAAGTGGAGGAAGAATTTTGGGAATGTAGTGCTTATAATGTTCT 1575
|||| ||||||||||||| |||||||||||||||||||||||| ||||| | ||||| |
Sbjct 1757 AAATAGGGAACTTGATTAGGTGGAGGAAGAATTTTGGGAATGTTGTGCTGGTTATGTTTT 1816
Query 1576 GTAACGGACCAGTAGAACGCACCGCTCTTGAATGGAGATTACTTTACGGGCGAATATTCA 1635
||||||| || || ||||| ||||| || || ||||| |||||||| || || |||||||
Sbjct 1817 GTAACGGTCCCGTTGAACGTACCGCACTCGAGTGGAGGTTACTTTATGGCCGGATATTCA 1876
Query 1636 AAACCGTGGTCATT-TTGTCCTCTCGGAAAGA-CTCAGATCTTTACGTCCAAGAAGCTAA 1693
|||| || || || || || |||| ||| || ||||||||| || || ||||||| ||
Sbjct 1877 AAACTGTTGTGATACTT-TCTTCTCAGAA-GAACTCAGATCTCTATGTAGAAGAAGCCAA 1934
Query 1694 ACTCGATCACATTTACAAGCGGCTACCGAAGATATTTGATCGGTATAGCAGCGCAGACGG 1753
|||||||||||||||||||| ||||| |||||||||||||| || ||||||||||| ||
Sbjct 1935 ACTCGATCACATTTACAAGCATCTACCAAAGATATTTGATCGATACAGCAGCGCAGAAGG 1994
Query 1754 ATTTTTGTTTGTTGAAGATGATACAATTCTTAATTACTGGAATTTACTTCAAGCCGACAA 1813
||||||||||||||||||||||||| |||| |||||||||||| |||||||||| |||||
Sbjct 1995 ATTTTTGTTTGTTGAAGATGATACAGTTCTCAATTACTGGAATCTACTTCAAGCTGACAA 2054
Query 1814 AACTAAGCTCTGGACTACAGACAAGGTAACGGAGTCATGGACAACAGTGAGAGC-AGCTG 1872
| ||||| | |||||||||||||||||| | |||| |||||| |||||| | | | | |
Sbjct 2055 ATCTAAGATTTGGACTACAGACAAGGTATCAAAGTCTTGGACATCAGTGAAACCGACC-G 2113
Query 1873 GGAA-TGCTGATTGGTATTCGGTTCAGGCGGAATTAGTAAAGAAAATTGTCAGTACAATG 1931
|||| | ||||||||| ||| || || || || ||||| ||||||| ||| |||||||||
Sbjct 2114 GGAACT-CTGATTGGTTTTCTGTACAAGCAGAGTTAGTGAAGAAAACTGTAAGTACAATG 2172
Query 1932 CCGGTTCATTTCCAAGTCAATTACAAGGAAGCCACAAAGAAGAC-CGATGACAAAACCTT 1990
|| | |||||||||||| || |||||||| ||||| ||||| | | |||| | ||||
Sbjct 2173 CCAGCTCATTTCCAAGTTAACTACAAGGACGCCACCAAGAACAATC-ATGAGA---CCTT 2228
Query 1991 TTT-GATGTGCAGCTCTGAAGTGTTCTATGTCCCTAAACG-CTTTGTCTCGGACTTTA-C 2047
| | ||||| || || || |||||||| |||||| | || || | ||||||| |
Sbjct 2229 AACAG-TATGCAGTTCAGAGGTATTCTATGTGCCTAAAAGACTG-GTAACTGACTTTATC 2286
Query 2048 AGATCTTGTTAATCTCGTGGGCGATATGGATTTGCATTACAAAGTGGCTGTGCCTATGTT 2107
||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 2287 -GATCTTGTTGATCTCGTGGGCGATATGGACTTGCATTACAAAGTGGCTGTGCCAATGTT 2345
Query 2108 CTTCCTATCGATGGATTCGCCTCAGAATTTTGACCCGGTCCTAGGCTCGATGGTTTACAA 2167
|||| | || ||||||||||||||||||||||||||||| || || || ||||| || ||
Sbjct 2346 CTTCTTGTCTATGGATTCGCCTCAGAATTTTGACCCGGTTCTCGGTTCAATGGTATATAA 2405
Query 2168 GTCGGAAC-CAGCTTCATTAAACTCTTCTTTGAGTTTGTATTCAGCGGAAGCACCTGCGG 2226
| |||| ||||||| || ||| |||||| |||| ||||||| || ||||||||||||
Sbjct 2406 GA-GGAAATCAGCTTCGTTTAACACTTCTTCGAGTCTGTATTCTGCTAAAGCACCTGCGG 2464
Query 2227 TTCATCCTTGGAGCATTTCGAGCGAACAAGATTTCATTAAATTGGTT-AGGGAGATGGCG 2285
|||| || |||||||| || ||||||||||||||||| ||||||||| || | |||||
Sbjct 2465 TTCACCCGTGGAGCATATCAAGCGAACAAGATTTCATCAAATTGGTTCAGCAA-ATGGCT 2523
Query 2286 GAAGGCGATCCGCTTTTGATGGAATTGGTAT 2316
|| ||||| |||||| ||||||| |||||||
Sbjct 2524 GAGGGCGACCCGCTTCTGATGGAGTTGGTAT 2554
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116113860585
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5