BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938756
Length=1125
Score E
Sequences producing significant alignments: (Bits) Value
AT3G57720.1 | Symbols: | Protein kinase superfamily protein | ... 1661 0.0
AT3G57730.1 | Symbols: | Protein kinase superfamily protein | ... 797 0.0
AT3G57710.1 | Symbols: | Protein kinase superfamily protein | ... 717 0.0
> AT3G57720.1 | Symbols: | Protein kinase superfamily protein
| chr3:21387722-21389726 FORWARD LENGTH=2005
Length=2005
Score = 1661 bits (899), Expect = 0.0
Identities = 1030/1094 (94%), Gaps = 6/1094 (1%)
Strand=Plus/Plus
Query 12 TATTTGTTAAATGAAATCAATTGTGAAGAAGTTGAAGCAGAGTCTGAGATCTGGATCGTC 71
|||||||| |||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 35 TATTTGTTTGATGAAATCGATGGTGAAGAAGTTGAAGCAGAGTCTGAGATCTGGATCGTT 94
Query 72 AGAgaaaaggaaggaaaaggaaaaagacattcaggaagaaaggtgtttcttggaaaacgg 131
||||||||||||||||||||||||||||||||||||||||| ||| ||||| || |||||
Sbjct 95 AGAGAAAAGGAAGGAAAAGGAAAAAGACATTCAGGAAGAAAAGTGGTTCTTAGACAACGG 154
Query 132 aagCATCTTCTTGAAAGAACTTATTGCTGATTGTAACGGTAAATCCATTCCTATACGTAG 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 155 AAGCATCTTCTTGAAAGAACTTATTGCTGATTGTAACGGTAAATCCATTCCTATACGTAA 214
Query 192 CTTTTCTTCTGATCAGATCTTGAAAGCTACAAGTAACTTCGGTTCCAGTTGTTTTGTAAC 251
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 215 CTTTTCTTCTGACCAGATCTTGAAAGCTACAAGTAACTTCGGTTCCAGTTGTTTTGTAAC 274
Query 252 CGCTGAGGGGTTCTACGTGTGGTACAAAGGTATCATAGAAGATAGATCTTACATGATCAA 311
||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct 275 CGCAGAGGGGTTTTATGTATGGTACAAAGGTATCATAGAAGATAGATCTTACATGATCAA 334
Query 312 GAGATTCTCCGAGTATAAAGTTACTCATTACAGAGTAGCAGAGGTTTACAACGAGATTGT 371
||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 335 GAGATTCTCTGAGTATAAAGTTACTCAATACAGAGTAGCAGAGGTTTACAACGAAATTGT 394
Query 372 TTTGTCTGCTCGGATGAGCAACCACAACAACTTTCTTAAACT-AGTAGGATTCTGTCTTG 430
||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 395 CTTGTCTGCTCGGATGAGCAACCACAACAACTTTCTTAAACTTA-TAGGATTCTGTCTTG 453
Query 431 AGTTTTGTCTTCCGGTTCTTGTGTTTGAATATGCAGAGCATGGAGTTCTGAATCACAGAG 490
||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 454 AGTTTAGTCTTCCGGTTCTTGTGTTTGAATATGCAGAACATGGAGTTTTGAATCACAGAG 513
Query 491 GAGGTGTTATGGTTAATGGGGAGGAA-TATATATTGCCTTTGAGTTTAAGGTTGAAGATT 549
|||||||||| || |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 514 GAGGTGTTATAGTCAATGGGGAGGAAGT-TATATTGCCTTTGAGTTTAAGGTTGAAGATT 572
Query 550 GGAAAGGAGATTGCAAATGCCGTGACTTATCTTCACATGGCGTTCCCCAAGATCCTCATA 609
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 573 GGAAAGGAGATTGCAAATGCTGTGACTTATCTTCACATGGCATTCCCCAAGATCCTCATA 632
Query 610 CATAGACACATTAATCCAAGGAATGtttttttGGACAAGAATTGGACTGCAAAGTTGTCT 669
|||||||||||||| |||||||||||||| |||||| |||||||||| |||||||||||
Sbjct 633 CATAGACACATTAAGCCAAGGAATGTTTTCTTGGACGAGAATTGGACCCCAAAGTTGTCT 692
Query 670 GATTTCTCCATCTCCATAAACATCCCTGAGGGAAAATCAAGGATAGAAGTTGAATGCGTT 729
|||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||| |||
Sbjct 693 GATTTCTCTATCTCTATAAACCTCCCTGAGGGAAAATCAAGAATAGAAGTTGAATGTGTT 752
Query 730 CAGGGAACAATCGGGTACCTCGATCCAGTATATTATACCACGAAAATGGTGACTGAATAT 789
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 753 CAGGGAACAATCGGGTACCTTGATCCAGTATATTATACCACGAAAATGGTGACGGAATAT 812
Query 790 ACCGATGTGTACAGCTTTGGAGTCTTTTTGATGGTTGTTCTCACTGCTAGACCAGCTCTC 849
||||| |||||||||||||||||||| ||||||||| ||||||||| || |||||| ||
Sbjct 813 ACCGACGTGTACAGCTTTGGAGTCTTCTTGATGGTTATTCTCACTGGTAAACCAGCACTT 872
Query 850 GCATCCACTAGCTCTGATGGGGACTACAAACATATTGCTGGCTATGTGAAAGGCTTTCAT 909
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 873 GCATCCACTAGCTCTGATGGGGACTACAAACATATTGCTAGCTACGTGAAAGGCTTTCAT 932
Query 910 GAGAATGGGCAGCTCGATGGAATAATAGATTCAAAGGTGATGGAAGACATTACAAGTGCT 969
|||||||||||||| |||||| |||||||| | |||||||||||||||||||||||||||
Sbjct 933 GAGAATGGGCAGCTTGATGGAGTAATAGATCCTAAGGTGATGGAAGACATTACAAGTGCT 992
Query 970 CAAAAAGTGCTTGTGGAAGCGTGTGTGGTGTTAGG-GCTGAGATGTTGTGAGCTGAGAGA 1028
|||||||||| ||||||||||||||||||||| || ||||||||| || |||||||||||
Sbjct 993 CAAAAAGTGCATGTGGAAGCGTGTGTGGTGTT-GGCGCTGAGATGCTGCGAGCTGAGAGA 1051
Query 1029 TGAAAACAGACCGAAGATGATCCAAATAGCTAAAGAACTCAAGCAGATTGAGGCATTATT 1088
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1052 TGAAAACAGACCAAAGATGATCCAAATAGCTAAAGAACTCAAGCAGATTGAGACATTATT 1111
Query 1089 TTGGAGATCCTAGC 1102
| ||||||| ||||
Sbjct 1112 TCGGAGATCATAGC 1125
Score = 298 bits (161), Expect = 8e-80
Identities = 417/537 (78%), Gaps = 32/537 (6%)
Strand=Plus/Plus
Query 555 GGAGATTGCAAATGCCGTGACTTATCTTCACATGGCGTTCCCCAAGATCCTCATACATAG 614
|||| |||||||||| ||||||||||||| |||||||| || |||||| ||||||| ||
Sbjct 1360 GGAGTTTGCAAATGCATTGACTTATCTTCAGATGGCGTTTCCGAAGATCATCATACACAG 1419
Query 615 ACACATTAATCCAAG-GAATG-tttttttGGACAAGAATTGGACTGCAAAGTTGTCTGAT 672
| | |||| || || | | | |||| ||||| ||||| ||||| |||| | || | ||
Sbjct 1420 AGATGTTAAGCC-AGTG-AGGATTTTCTTGGATAAGAACTGGACCGCAATGCTGACCAAT 1477
Query 673 TTCTCCATCTCCATAAAC-ATC--CCTGAGGGAAAATCAAGGATAGAAGTTGAATGCGTT 729
|| || | ||| || | || |||||||||||| |||| || ||| |||| | | |
Sbjct 1478 TTATCGTTTTCC--AATCTCTCTTCCTGAGGGAAAAACAAGAATTGAAACTGAAAGAG-T 1534
Query 730 CA-GGGAACAATCGGGTACCTCGATCCAGTATATTATACCACGAAAATGGTGACTGAATA 788
| ||||||| | |||||||| ||||| || ||||||| | ||||| |||||
Sbjct 1535 AATGGGAACAGTAGGGTACCTGGATCC--------AT-CCACGAAGTTTGTGACGGAATA 1585
Query 789 TACCGATGTGTACAGCTTTGGAGTCTTTTTGATGGTTGTTCTCACTGCTAGACCAGCTCT 848
||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1586 TACAGACGTGTACAGCTTTGGAGTCTTTTAGATGGTTGTTCTCACTGCTAGACCAGCTCT 1645
Query 849 CG-CATCCACTAGCTCTGATGGGGACTACAAACATATTGCTGGCTATGTGAAAGGCTT-T 906
| | || || | | ||||||||| |||| | |||| ||||||||||||||||||| |
Sbjct 1646 TGTC-TCTGCTGGATTTGATGGGGAATACAGAGGTATTACTGGCTATGTGAAAGGCTTAT 1704
Query 907 CATGAGAATGGGCAGCTCGATGGAA-TAATAGATTCAAAGG-TGATGGAAGACATTACAA 964
| ||||||||| |||||||| || |||| ||| | || | || | |||||| |||||
Sbjct 1705 -ACGAGAATGGGAAGCTCGATA-AAGTAATTGAT-CGAATGATGTTCAAAGACAATACAA 1761
Query 965 GTGCTCAAAAAGTG-CTTGTGGAAGCGTGTGTGGTG-TTAGGGCTGAGATGTTGTGAGCT 1022
|| ||||| | | | |||||||| || || || || | | ||||||| ||||||
Sbjct 1762 ATGGTCAAAGA-TCACAGGTGGAAGCATGCGTTGTACTT-GCGTTGAGATGCTGTGAGGA 1819
Query 1023 GAGAGATGAAAACAGACCGAAGATGATCCAAATAGCTAAAGAACTCAAGCAGATTGA 1079
||||| ||| |||||||||||||||||||| ||||||| |||||||||| ||||||
Sbjct 1820 AAGAGACGAAGACAGACCGAAGATGATCCAAGTAGCTAAGGAACTCAAGCGGATTGA 1876
> AT3G57730.1 | Symbols: | Protein kinase superfamily protein
| chr3:21389964-21391562 REVERSE LENGTH=1599
Length=1599
Score = 797 bits (431), Expect = 0.0
Identities = 889/1107 (80%), Gaps = 44/1107 (4%)
Strand=Plus/Plus
Query 12 TATTTGTTAAATGAAATCAATTGTGAAGAAGTTGAAGCAGAGTCTGAGATCTGGATCGTC 71
|||||||| |||| |||| || |||||||| |||||||| | ||||||| |||| || |
Sbjct 158 TATTTGTTGAATGGAATCGATGGTGAAGAAATTGAAGCAAAATCTGAGAACTGGGTC--C 215
Query 72 AGAgaaaaggaaggaaaaggaaaaagacattcaggaa-gaaaggtgtttcttggaaaacg 130
| ||||| ||||| | |||||| || | | ||| ||||| || ||||| || || |
Sbjct 216 TG-GAAAAAGAAGG---A--AAAAAG-CA-TGAAGAAGGAAAGATGGTTCTTAGAGAATG 267
Query 131 gaagCATCTTCTTGAAAGAACTTATTGCTGATTGTAACGGTAAATCCATTCCTATACGTA 190
|||| |||||||| ||||| || || | ||||||||| ||||||||||||||||||||||
Sbjct 268 GAAGTATCTTCTTAAAAGAGCTCATCGTTGATTGTAATGGTAAATCCATTCCTATACGTA 327
Query 191 GCTTTTCTTCTGATCAGA-TCTTGAAAGCTA-CAAGTAACTTCGGTTCCAGTTGTTTTGT 248
||||| ||||| |||| || | ||||| | |||| || |||| || || ||||||||
Sbjct 328 GCTTTACTTCTTCCCAGATTCGT-AAAGCCACCAAG-AATTTCGATTTAAGCTGTTTTGT 385
Query 249 AACCGCTGAGGGGTTCTACGTGTGGTACAAAGGTATCATAGAAGATAGATCTTACATGAT 308
| | | || ||||||||| | |||||||||||| | || ||||||||||||||||||||
Sbjct 386 AGCTGAAGAAGGGTTCTACATATGGTACAAAGGTGTAATCGAAGATAGATCTTACATGAT 445
Query 309 CAAGAGATTCTCCGAGTATAAAGTTACTCATTACAGAGT-AGCAGAGGTTTACAACGAGA 367
|||||||||||| ||||||||||| ||| |||||||||| || |||||||| || || |
Sbjct 446 CAAGAGATTCTCTGAGTATAAAGTCACTGATTACAGAGTAAG-TGAGGTTTATAAAGACA 504
Query 368 TTGTTTTGTCTGCTCGGATGAGCAACCACAACAACTTTCTTAAACTAGTAGGAT-TCTGT 426
|||| ||||||||||| |||||||||||||||||||||||||||||| |||||| | |||
Sbjct 505 TTGTCTTGTCTGCTCGTATGAGCAACCACAACAACTTTCTTAAACTACTAGGATGT-TGT 563
Query 427 CTTGAGTTTTGTCTTCCGGTTCTTGTGTTTGAATATGCAGAGCATGGAGTTCTGAATCAC 486
|||||||| | |||| |||||||||||||||| ||| |||||||||||| ||||| ||
Sbjct 564 CTTGAGTTCCCTTTTCCTGTTCTTGTGTTTGAATTTGCTGAGCATGGAGTTTTGAATTAC 623
Query 487 AGAGGAGGTGTTATGGTTAATGGGGAGGAATATATATTGCCTTTGAGTTTAAGGTTGAAG 546
|||||||| ||| |||||| || || || | | |||||||||||||||| |||||||||
Sbjct 624 CGAGGAGGTATTACGGTTAACGGTGAAGAGTCTTTATTGCCTTTGAGTTTGAGGTTGAAG 683
Query 547 ATTGGAAAGGAGATTGCAAATGCCGTGACTTATCTTCACATGGCGTTCCCCAAGATCCTC 606
||||| |||||||||||||||||| || ||||||||||||||||||| || |||||| ||
Sbjct 684 ATTGGGAAGGAGATTGCAAATGCCTTGGCTTATCTTCACATGGCGTTTCCTAAGATCATC 743
Query 607 ATACATAGACACATTAATCCAAGGAATGtttttttGGACAAGAATTGGACTGCAAAGTTG 666
||| ||||| | | || ||| | ||||||| |||||||| ||||||||||||||||||
Sbjct 744 ATATATAGAGATGTGAAGCCACTGCATGTTTTCTTGGACAATAATTGGACTGCAAAGTTG 803
Query 667 TCTGATTTCTCCATCTCCATAAAC-ATCCCTGAGGGAAAATCA-AGGATAGAAGTTGAAT 724
|||||||| || |||| || | | | |||||||||||| | |||||||| |||
Sbjct 804 TCTGATTTATCTTTCTCAAT-ATCGCTGGAAGAGGGAAAATCACA-GATAGAAGCGGAA- 860
Query 725 G-CGTTCAGGGAACA-ATCGGGTACCTCGATCCAGTATA-TTATACCACGAAAATGGTGA 781
| ||| | ||| ||| || || ||||| |||||| |||| || | | || | ||| ||||
Sbjct 861 GACGTGCTGGGTACATAT-GGTTACCTTGATCCATTATACTT-TGCAACTAGAATTGTGA 918
Query 782 CTGAATATACCGATGTGTACAGCTTTGGAGTCTTTTTGATGGTTGTTCTCACTGCTAGAC 841
| |||||||| |||||||||||||||||||||||||||||||||||| |||||| || |
Sbjct 919 CAGAATATACGGATGTGTACAGCTTTGGAGTCTTTTTGATGGTTGTTATCACTGGTATAT 978
Query 842 CAGCTCTCGCATCCACTAGCTCTGATGGGGACTACAA-ACATATTGCT-GGCTATGTGAA 899
| | | | | || || | ||||||||| | | | | |||| || || ||| ||||
Sbjct 979 CGGTT-TA-CTTC-ACCGGATCTGATGGGTA-TCCTGTAGGTATT-CTTGGATATATGAA 1033
Query 900 AGGCTTT-CATGAGAATGGGCAGCTCGATGGAATAATAGATTCAAAGGTGATGGAAGACA 958
|||||| | |||||||||| ||||| ||| |||| || || | | | | ||| |||| |
Sbjct 1034 AGGCTTAGC-TGAGAATGGGAAGCTCAATGAAATAGTATATCCTATGATAATGAAAGAGA 1092
Query 959 TTACAAGTGCTCAAAAAGTGCTTGTGGAAGCGTGTGTGGTG-TTAGGGCTGAGATGTTGT 1017
| ||||||||||||| | ||| |||||||| || || | || | |||||||| ||
Sbjct 1093 TGACAAGTGCTCAAAGATTGCAGGTGGAAGCATGCGTTTTACTT-GCACTGAGATGCTGC 1151
Query 1018 GAGCTGAGAG-ATGAAAACAGACCGAAGATGATCCAAATAGCTAAAGAACTCAAGCAGAT 1076
||| ||| | | ||| |||||||||||||||| || |||||||||||||||||| |||
Sbjct 1152 GAGGAGAGGGTA-GAAGACAGACCGAAGATGATTCAGGTAGCTAAAGAACTCAAGCGGAT 1210
Query 1077 TGAGGCATTAT-TTTGGAGATCCTAGC 1102
||| ||| || ||| |||||||||||
Sbjct 1211 TGAA-CATCATGTTTTGAGATCCTAGC 1236
> AT3G57710.1 | Symbols: | Protein kinase superfamily protein
| chr3:21384676-21387399 REVERSE LENGTH=2724
Length=2724
Score = 717 bits (388), Expect = 0.0
Identities = 857/1074 (80%), Gaps = 69/1074 (6%)
Strand=Plus/Plus
Query 45 GAAGCAG-AGTCTGAGATCTGGATCGTCAGAgaaaaggaaggaaaaggaaaaagacattc 103
||||||| | ||||| ||||||||| | | || |||||||||||||| | ||| |
Sbjct 117 GAAGCAGTA-TCTGAAATCTGGATC-T--GGGACAAGGAAGGAAAAGG-ACAAG----GC 167
Query 104 aggaagaaaggtgtttcttggaaaacggaagCATCTTCTTGAA-AGAACTTATTGCTGAT 162
|||| ||||| |||||||| ||||||||||||||||| || ||||||| | ||||||
Sbjct 168 --GAAG--AGGTGGTTCTTGGATAACGGAAGCATCTTCTT-AAGAGAACTTGTAGCTGAT 222
Query 163 TGTAACGGTAAATCCATTCCTATACGTAGCTTTTCTTCTGATCAGATCTTGAAAGCTAC- 221
||||||||||||||||||||||| || || |||||| |||| ||||| |||||||| ||
Sbjct 223 TGTAACGGTAAATCCATTCCTATTCGCAGTTTTTCTCCTGAGCAGATATTGAAAGCCACC 282
Query 222 AAGTAACTTCGGTTCCAGTTGTTTTGTAACCGCTGAGGGGT-T-CTACGTGTGGTACAAA 279
|| || |||| ||| || |||||||| | || || || | ||| ||||| | |
Sbjct 283 AAC-AATTTCGATTCTAGCTGTTTTGTCTC-GCA-AGATGTATACTATAAATGGTATAGA 339
Query 280 GGT-ATCATAGAAGATAGATCTTACATGATCAAGAGATTCTCCGAGTATAA-AGTTACTC 337
||| | || |||||||||||||||||||||||||||||||| ||| || | | ||||
Sbjct 340 GGTGAA-ATTGAAGATAGATCTTACATGATCAAGAGATTCTCAGAGGATGAGA-TTACAG 397
Query 338 -ATTAC-A----GAGT-AGCAGAGGTTTACAACGAGATTGTTTTGTCTGCTCGGATGAGC 390
| || | |||| | ||||||||||||||| ||||| |||||||||||||||||
Sbjct 398 GAAAACGACATAGAGTTAA-AGAGGTTTACAACGACATTGTCTTGTCTGCTCGGATGAGT 456
Query 391 AACCACAACAACTTTCTTAAACTAGTAGGAT-TCTGTCTTGAGTTTTGTCTTCCGGTTCT 449
|| |||| ||||||||| |||| |||||| | ||||| |||||| | ||||||||||
Sbjct 457 AATCACAGTAACTTTCTTCAACTTTTAGGATGT-TGTCTCGAGTTTCCTTTTCCGGTTCT 515
Query 450 TGTGTTTGAATATGCAGAGCATGGAGTTCTGAATCA-CAGAGGAGGTGTTATGGTTAATG 508
||||||||||| |||||| ||||||| | ||||||| | ||||||||||||| |||||||
Sbjct 516 TGTGTTTGAATTTGCAGAACATGGAGCTATGAATCAGC-GAGGAGGTGTTATAGTTAATG 574
Query 509 GGGAGGAATATATATTGCCTTTGAGTTTAAGGTTGAAGATTGG-AAAGGAGATTGCAAAT 567
| || |||| | ||||||| | |||| || ||||||||||||| |||| ||||||| |||
Sbjct 575 GTGAAGAATCTTTATTGCCGTGGAGTGTACGGTTGAAGATTGGGAAAG-AGATTGCTAAT 633
Query 568 GCCGTGACTTATCTTCACATGGCGTTCCCCAAGATCCTCATACATAGACACATTAATCCA 627
|| |||||||||||||||| ||| ||||| |||||| ||||||||||| | |||| ||
Sbjct 634 GCGGTGACTTATCTTCACACGGCATTCCCTAAGATCATCATACATAGAGATGTTAAACCG 693
Query 628 AGGAATGtttttttGGACAAGAATTGGACTGCAAAGTTGTCTGATTTCTCCATCTCCATA 687
| | ||||||| ||||||||||||||||| ||||||||||||||||| ||| |||| |||
Sbjct 694 ATGCATGTTTTCTTGGACAAGAATTGGACCGCAAAGTTGTCTGATTTATCCTTCTCAATA 753
Query 688 AACATC--CCTGAGGGAAAATCAAGGATAGAAGTTGAATGCGTTC-AGGGAACAATCGGG 744
| || |||||||||||||| || ||||||| |||||| |||| ||| |||| | |||
Sbjct 754 T-C-TCTACCTGAGGGAAAATCGAGAATAGAAGCTGAATGGGTTCTAGG-AACATTTGGG 810
Query 745 TACCTCGATCCAGTATATTATACCACGAAAATGGTGACTGAATATACCGATGTGTACAGC 804
||| |||||||| ||||| ||| ||| | |||||||||||||| ||||| ||||||
Sbjct 811 TACATCGATCCATTATATCATAAGACGTGTTTTGTGACTGAATATACAGATGTCTACAGC 870
Query 805 TTTGGAGTCTTTTTGATGGTTGTTCTCACTGCTAGACCAGCTCTCGCATCCACTAGCTCT 864
|||||| ||| |||| ||||| || | |||| || ||| ||| || || |||| |||
Sbjct 871 TTTGGAATCTGTTTGCTGGTTATTATTACTGGTAAACCGGCTATC--ATG-ACTATTTCT 927
Query 865 GATGGGGA-CTACAAACATATTGCTG-GCT-ATGTGAAAG-GCTT-TCATGAGAATGGGC 919
||||| || || ||| |||| || ||| | |||| || | || | ||||||||||
Sbjct 928 GATGGAGATCTCCAAGG-TATT-CTTAGCTTA-GTGAGAGAG-TTATG-TGAGAATGGGA 982
Query 920 AGCTCGATGGAA-TAATAGATTCAAAGGT-GATGGAAGACATTACAAGTGCTCAAAAAGT 977
|||| |||| || | |||||| | | ||| |||| |||| || ||||||| ||||| ||
Sbjct 983 AGCTTGATG-AAGTGATAGATCCGA-GGTTGATGAAAGATATCACAAGTGGTCAAAG-GT 1039
Query 978 -GCTTGTGGAAGCGTGTGTGGTGTTAGGGCT--GAGATGTTGTGAGCTGAGAGATGAAAA 1034
|| |||||||| ||||||||| | || || |||||| ||| || |||||||||| |
Sbjct 1040 TGCAAGTGGAAGCATGTGTGGTGCT-GG-CTTTGAGATGCTGTAAGGAGAGAGATGAAGA 1097
Query 1035 CAGACCGAAGATGATCCAAATAGCTAAAGAACTCAAGCAGATTGAGGCATTATT 1088
|||||| |||||||||||| ||||||||||||||||||||||||| |||| |||
Sbjct 1098 CAGACCAAAGATGATCCAAGTAGCTAAAGAACTCAAGCAGATTGAAGCATCATT 1151
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55170398955
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5