BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg938811
Length=1099
Score E
Sequences producing significant alignments: (Bits) Value
AT3G58240.1 | Symbols: | TRAF-like superfamily protein | chr3:... 374 1e-102
AT3G58210.1 | Symbols: | TRAF-like family protein | chr3:21562... 283 2e-75
AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domai... 272 5e-72
AT3G58370.1 | Symbols: | TRAF-like family protein | chr3:21595... 222 5e-57
AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:21564... 176 4e-43
AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:19769... 150 2e-35
AT1G31370.1 | Symbols: | Ubiquitin-specific protease family C1... 117 2e-25
AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:21597... 111 1e-23
AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:21589... 110 4e-23
AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:11243... 93.5 4e-18
AT1G31380.1 | Symbols: | TRAF-like family protein | chr1:11240... 87.9 2e-16
AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:11245... 71.3 2e-11
> AT3G58240.1 | Symbols: | TRAF-like superfamily protein | chr3:21568530-21569827
REVERSE LENGTH=954
Length=954
Score = 374 bits (202), Expect = 1e-102
Identities = 371/451 (82%), Gaps = 17/451 (4%)
Strand=Plus/Plus
Query 638 AGG-AGATTTGGTGGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGA 696
||| || ||||||| ||||||| |||||||||||||||||||||||| ||||| ||||||
Sbjct 512 AGGCAGGTTTGGTGAATGTCAAGGGGTTTCAAGTTCTTCCTTCACAGTTGGGTATTGTGA 571
Query 697 GCCGTATTTTTGAAAAACACCCAGAGACTGCATCAGAATGCCGTACAAAGAACCAAGATC 756
|| || |||||||||||||| |||||||||| ||||||| |||| ||||||||||| |
Sbjct 572 ATCGCATCTTTGAAAAACACCCGGAGACTGCATTAGAATGCTGTACGAAGAACCAAGAAC 631
Query 757 TGAGAACATCATACATGAATGTCCTCATAAGCGTAATCAAGATGCTCTTCAAAGGACCTG 816
||||| |||||||||| |||||| || | ||| |||||||| |||||| |||||| ||
Sbjct 632 TGAGAGCATCATACATAAATGTCATCTTTAGCCTAATCAAGTTGCTCTACAAAGGGGCTC 691
Query 817 AGGAACACTCCA-AGGATGATCTGTCTGATGCAGAAGCTGCTCTGGCATACATGACACAT 875
|||||||||||| | ||||||||||||||||||||| ||||||||||||||||| | ||
Sbjct 692 AGGAACACTCCACA-CATGATCTGTCTGATGCAGAAGGTGCTCTGGCATACATGAAAAAT 750
Query 876 GTAGGGTTTAAGTTGGATTGGTTGGAGAA-ACAACATGAAGAAGTAAAAGAAAG-AATGA 933
|||||||||||||||||||||||||||| | ||| ||| ||||| ||||||| || ||
Sbjct 751 CTAGGGTTTAAGTTGGATTGGTTGGAGAAGA-AACTTGATGAAGTCAAAGAAATCAA-GA 808
Query 934 AGAAATGTGCCCGGGTGTGTGAAATAGAGAAACAGCTGCATGACTTGGA-GCACAAGTGC 992
||||||||| || ||| |||||| |||||| ||||||| |||||| | | | ||| |
Sbjct 809 AGAAATGTGAGCGAGTGACTGAAATGGAGAAAGAGCTGCACGACTTG-ATGAATAAGCAC 867
Query 993 A-AAGACCTAA--AAGCTCAGCTGAATAAAG-AGAAGGCGGAGATTTTGGAGGCAACAGC 1048
| || || ||| || || |||| | |||| ||||| |||||| | | || | ||
Sbjct 868 ACAA-ACGTAAGTAAACT--GCTGGA-AAAGGAGAAGTTAGAGATTAAGAATGCGTCGGC 923
Query 1049 TCCTGATCtttttttCATTGATGTTGTTTGA 1079
||||||||| | ||||| ||||||| |||||
Sbjct 924 TCCTGATCTATCTTTCAGTGATGTTATTTGA 954
> AT3G58210.1 | Symbols: | TRAF-like family protein | chr3:21562442-21564067
REVERSE LENGTH=1196
Length=1196
Score = 283 bits (153), Expect = 2e-75
Identities = 537/713 (75%), Gaps = 63/713 (9%)
Strand=Plus/Plus
Query 266 TTTATCTCTGTATCTTGAAGTTGCTGATTTTAAATCCTTGCCTTCTGGATGGCGAAGAAA 325
||| || |||| ||| ||||| |||||| || ||| ||||| |||||||| | || |
Sbjct 153 TTTGTCGCTGTTTCTGGAAGTGGCTGATCCTAGATCATTGCCACCTGGATGGAGTAG--A 210
Query 326 CGTAG-AATTTA-C-GATAACTCTAGTAAAACAATTTTGTGAGAAATTCTCACTAGCGAA 382
| | | | ||| | ||||| | || || ||| || ||| ||| ||||| | ||||
Sbjct 211 CAT-GCACGTTATCTTTTAACTATTGTTAATCAACATTCTGATAAAATCTCA-AAACGAA 268
Query 383 A-GTAACACAAC--ATTGG-TTAGACCACAAGGTACCAGACTGGGGTTT-TAAATCCATG 437
| | || |||| | ||| ||| | || ||| | |||| |||||||| | | | |||
Sbjct 269 ACG-AA-GCAACTAAGTGGTTTA-ATCAAAAGATTCCAGGTTGGGGTTTGT-CAGCAATG 324
Query 438 ATTCCCCTTACCACACTTCATGACAAGGATGGTGGGTTTCTTGTGAACGATGAACTCAAG 497
||||||||||| | |||||||| ||| |||||||| ||||||||||| ||||||||||||
Sbjct 325 ATTCCCCTTACTAAACTTCATGCCAAAGATGGTGGATTTCTTGTGAATGATGAACTCAAG 384
Query 498 ATTGTTGCTGAGGTCGATGTTCTTGAAGTTATTGGCAAACTAGATGTACCCGG-GGAATC 556
|| ||||||||||| |||||||||||||||||||||||||||||||||| || ||||||
Sbjct 385 ATAGTTGCTGAGGTAAATGTTCTTGAAGTTATTGGCAAACTAGATGTACC-GGAGGAATC 443
Query 557 TGAAGAGGAAACCCAA----CC-----TGTGAAAAAGATAAAGC-AGAATGATGATGGTG 606
|||||||||||||||| || | |||||||| ||||| ||| | ||||| ||
Sbjct 444 TGAAGAGGAAACCCAAGTTACCCAACCTATGAAAAAGGTAAAGGTAGATT-ATGATCATG 502
Query 607 CGGTGTCTAGTGATCTGCT--T-AAGGAGATTCCA--GG--AG--ATTTGGTGGATGTCA 657
|| ||||| |||| || | | || |||| |||| || || | | |||| ||||
Sbjct 503 TGGAGTCTAATGATTTGATGATCAACGAGACTCCACCGGTTAGTGAACTCATGGACGTCA 562
Query 658 ATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGA-GCCGTATTTTTGAAAAACAC 716
|||| ||||||||||||||||| ||||||| |||||||| || ||||||||||||||||
Sbjct 563 ATGGTTTTCAAGTTCTTCCTTCCCAGGTGGATTTTGTGAAGC-GTATTTTTGAAAAACAT 621
Query 717 CCAGAGACTGCATCAGAATGCCGTACAAAGAACCAAGATCTGAG-AACATCATACATGAA 775
||||| | |||| ||| | |||| ||||||||| | ||||||| || | ||| ||||||
Sbjct 622 CCAGACATTGCAAAAGATTTCCGTCCAAAGAACCCACATCTGAGGAA-AGCATGCATGAA 680
Query 776 TGTCCT-CATAAGCGTAATCAAGATGCTCTTCAAAGGACCTGAGGAA-C-ACTCCAAGGA 832
| || | | | ||| |||| ||| | | | || |||| || || | | || || ||
Sbjct 681 TTTCTTGC-TCAGCTTAATGGAGACATTGTGCCAACCACCTCAG-AAGCTA-TCAAATGA 737
Query 833 TGATCTGTCTG-ATGCAGA-AGCTGCTCTGGCATACATGACACATGTAGGG-TTTAA-GT 888
||||| | || | ||||| | ||| ||| ||||| ||| | | | ||| ||||| ||
Sbjct 738 AGATCT-TGTGGAAGCAGACAA-TGCACTGACATACGTGAAAGTT-TCGGGGTTTAAAGT 794
Query 889 TGGATTGGTTGGAGAAACAA-C-ATGAAGAAGT-AA-AAGAAAGAATGAAGAA 937
|||||||||||||||| || | | || ||||| || || |||||| || |||
Sbjct 795 -GGATTGGTTGGAGAAA-AAGCTA-GAGGAAGTGAAGAA-AAAGAAGGAGGAA 843
> AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain-containing
protein | chr3:16343333-16346027 FORWARD LENGTH=1695
Length=1695
Score = 272 bits (147), Expect = 5e-72
Identities = 514/685 (75%), Gaps = 50/685 (7%)
Strand=Plus/Plus
Query 139 AGAAGTTTACTTGGGTGATTAAGAATTTTTCCA-CTTTGCAATCTGAGAAAATCT-ATTC 196
|||| || |||||||||||||||||||| | || |||||||||||||| | || | | ||
Sbjct 11 AGAAATTCACTTGGGTGATTAAGAATTTCT-CATCTTTGCAATCTGAGTACAT-TAAATC 68
Query 197 AGACAAATTTGTGATCAGCGGCTGCAAATGGCGTCTTTTAGCCTTTCCCAA-GGGAGATA 255
|| | ||| |||||| | |||||||||||| ||||||| |||| |||||| || | | |
Sbjct 69 TGATATATTCGTGATCGGTGGCTGCAAATGGTGTCTTTTGGCCTATCCCAATGGAAAACA 128
Query 256 -AAGT-C-AAATGTTTATCTCTGTATCTTGAAGTTGCTGA-TTTTAAATCCTTGCCTTCT 311
|| | | | | ||| ||||||||||| || | | || | ||| ||| | ||||||| |
Sbjct 129 GAA-TGCTAGTTATTTGTCTCTGTATCTGGATGGTCCT-ACTTTAAAAACTTTGCCTTGT 186
Query 312 GGATGGCGAAGAAACGT-AGAATTTACG-ATAACTCTAGTAAAACAATTTTGTGAGAAA- 368
||||| |||| | | || |||| || ||||| | ||||| ||| | | || |||
Sbjct 187 GGATGTAGAAGGCGCATAAG-ATTT-CGCCTAACTGTTGTAAATCAACTCTCCGA-AAAC 243
Query 369 TTCTCACTAGCGA-AAGTAA-CACAAC-ATTGGTTAGACCACAAGGTACCAGACTG-G-G 423
|||| | | ||| || || | ||| | ||||| || | ||| | || ||| | |
Sbjct 244 CTCTCCCGA-CGAGGAG-AAGGAAAACGA-TGGTTTGATAAAAAGCTTCC--TCTGTGTG 298
Query 424 GTTTTAAATCCA-TGATTCCCCTTACCACACTTCATGACAAGGATGGTGGGTTTCTTGTG 482
| | | || | || ||| ||||||| |||| ||| ||| ||||||| |||||||||
Sbjct 299 GGTATGAA-GAAGTGCTTCTTCTTACCAAACTTAATGCCAAACATGGTGGATTTCTTGTG 357
Query 483 AACGATGAACTCAAGATTGTTGCTGAGGTCGATGTTCTTGAAGTTATTGGCAAACTAGAT 542
||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||| |||||
Sbjct 358 AACAATGAAGTCAAGATTGTTGCGGAGGTAGATGTTCTTGAAGTTATTGGCAAATTAGAT 417
Query 543 GTACCCGGGGAATCTGAAGAGGAAACCCAACCT-GTGAAAAAGATAAAGC-AGA--ATGA 598
|| | ||||||| |||||| || ||||| | ||||| ||| | || | | |||
Sbjct 418 GTTTCTAAGGAATCTCAAGAGGTAATTAAACCTCG-GAAAAGGATGAGGCTATATGGTGA 476
Query 599 TGATGGTGCGGTGTCTAGTGATCTGCTTAAGGAGA-TTCCAGGAGATTTGGTGGATGTCA 657
|| |||||||||||||||| || ||| ||||| | || | | | || |||||||
Sbjct 477 TGGTGGTGCGGTGTCTAGTCATTTGCACAAGGAAACTT-C-----A-TCAGTAGATGTCA 529
Query 658 ATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGA-GCCGTATTTTTGAAAAACAC 716
||||||||||||||||||||||||||| || | ||||| || |||| || |||| ||||
Sbjct 530 ATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGC-GTATATTCGAAAGACAC 588
Query 717 CCAGAGACTG-CATCAGAATGCCGTA-CAAAGAACCAAGA-TCTGAGAACATCATACATG 773
||| | | || ||| ||| | ||| | ||||||||||| | | |||| |||||| ||
Sbjct 589 CCATACA-TGGCATTAGAGTTCCG-AGCAAAGAACCAACAGT-TGAGGGCATCATGTATA 645
Query 774 AATGTCCTCATAAGCGTAATCAAGA 798
||||||||| | ||| |||||||||
Sbjct 646 AATGTCCTCCTCAGCCTAATCAAGA 670
> AT3G58370.1 | Symbols: | TRAF-like family protein | chr3:21595774-21596538
REVERSE LENGTH=660
Length=660
Score = 222 bits (120), Expect = 5e-57
Identities = 401/530 (76%), Gaps = 46/530 (9%)
Strand=Plus/Plus
Query 435 ATGATTCCC-CTTACC-ACACTTCATGACAAGGATGGTGGGTTTCTTGTGAAC-GATGAA 491
|||| |||| ||| || || ||||||| ||| ||| ||||| |||||||||| || |||
Sbjct 1 ATGA-TCCCTCTTCCCAAC-CTTCATGCCAAAAATGCTGGGTATCTTGTGAACGGA-GAA 57
Query 492 CTCAAGATTGTTGCT-GAGGTCGATGTTCTTGAAGTTATTGGCAAACTAGATGTACCCGG 550
|||||||||||| | ||| | ||| |||||||||||||||||| |||||||| | |
Sbjct 58 GTCAAGATTGTTG-TGGAGATAAATGATCTTGAAGTTATTGGCAAGTTAGATGTATCAGA 116
Query 551 GGAATCTGAAGAGGA-AACCCAACCTGTGAAAAAGATAAAGC-AGAATGATGATGGTGCG 608
||||||||||| || || ||||||| ||||||||||||||| || ||||| ||| |||
Sbjct 117 AGAATCTGAAGA-GACAAACCAACCTCTGAAAAAGATAAAGCTAG-ATGATAATGATGCA 174
Query 609 GTGTCTAGTGA-TCTGCTTAAGGAGA-TT--CCAG--GA-GATTTG-GTGGATGTCAATG 660
|||||| ||| ||| || || |||| || |||| | || | | ||||||||||
Sbjct 175 GTGTCTTTTGATTCT-CTCAACGAGACTTCACCAGTAAAGGA-AAGCATTGATGTCAATG 232
Query 661 GGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGA-GCCGTATTTTTGAAAAACACCCA 719
||||||||||||||||||||||||| | | ||||| | |||| ||||||| ||| |||
Sbjct 233 GGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGT-GTATATTTGAAAGACATCCA 291
Query 720 GAGACTGCATCAGAATGCCGTACAAAGAACCAAG-ATCT-GA-GAACATCATACATGAAT 776
|| ||||||| ||| |||| ||||||| | | | || || | || ||||||||| |
Sbjct 292 GACTTTGCATCAAAATTCCGTCCAAAGAATCG-GCA-CTTGAAGT-CAACATACATGACT 348
Query 777 GTCCTCATAAG-CGTAATCAAGATGCTCTTCAAAGG-ACCTGAGGAACACTCCAAGGATG 834
|||||| || | | |||| |||| | | | | | | ||||||||| | | | | ||||
Sbjct 349 GTCCTCCTAGGAC-TAATTAAGACGTTGTGCCA-GTTACCTGAGGAGCTCACTGACGATG 406
Query 835 ATCTGT-CTGATGCAGAAGCTGCTCTGGCATACATG-ACACATG-TAGGGTTTAAG-TTG 890
||||| | || ||| | ||| || ||||| || | | ||| | || || ||| |||
Sbjct 407 ATCTGGAC-GAAGCATCCGTTGCAGTGTCATACGTGGAAA-ATGGT-GGCTT-AAGATTG 462
Query 891 GATTGGTTGGAGAAACAA-CATGAAGAAGTAAAAG-AAAGAATGAAGAAA 938
|||||||||||||| || | || ||||| || | |||||| |||||||
Sbjct 463 GATTGGTTGGAGAAG-AAGCTTGCGGAAGTTAAGGCAAAGAA-GAAGAAA 510
> AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:21564450-21566482
REVERSE LENGTH=1636
Length=1636
Score = 176 bits (95), Expect = 4e-43
Identities = 300/396 (76%), Gaps = 25/396 (6%)
Strand=Plus/Plus
Query 551 GGAATCTGAAGAGGAAACCCA-ACCTGTGAAAAAGATAAAGCA-GAATGATGATGGTGCG 608
||| |||||||||| || || |||| | |||||||| ||| | |||||||||||||| |
Sbjct 866 GGATTCTGAAGAGGGAA-GCAGACCTCTTAAAAAGATTAAG-AGGAATGATGATGGTGTG 923
Query 609 GTGTCTAGTGA-TCTGCTTAAGGAGATTC--C-AG-G-A-GATTTGGTGGATGTCAATGG 661
||||| ||| || | | || ||| || | || | | || ||||| |||||||
Sbjct 924 AAGTCTAATGATTCAG-TCAACAAGACTCAACAAGTGAAGGAAACCATGGATATCAATGG 982
Query 662 GTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGAGCCGTATTTTTGAAAAACACCCAGA 721
||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||
Sbjct 983 GTTTCAAGTTCTTCCTTCACAGGTGACACTTGTGAGCCGTATTTTAAAAAAATACCCAGA 1042
Query 722 GACTGCATCAGAATGCCGTACAAAGAACCAAGATCTGAGAACATCATACATGAATGTCCT 781
| ||||| || || | | ||||||||| | ||||||| ||| ||| ||||||||||||
Sbjct 1043 CATTGCATTAGGATTCAATGCAAAGAACCGACATCTGAGGACAGCATGCATGAATGTCCT 1102
Query 782 CATAAGCGTAATCAAGATGCTCTTCAAAGG-ACCTGAGGAACACTCCA-AGGATGATCTG 839
||| ||| ||||| ||| || | | | | ||| |||| | ||| | | || ||| ||
Sbjct 1103 CATCAGCCTAATCGAGACACTGTGCCA-GTCACCACAGGAGCTCTC-AGACGAAGATATG 1160
Query 840 TCTGATGCAGA-AGCTGCTCTGGCATACATGACAC-ATGTAGGGTTTAAGTTGGATTGGT 897
||| ||||| | ||| || | |||| || || ||| ||| |||||| |||||||||
Sbjct 1161 GATGAAGCAGACAA-TGCACTAGTATACGTG-CAAGATGCAGGCTTTAAGGTGGATTGGT 1218
Query 898 TGGAGAAACAA-CATGAAG-AAGTAAAAGAAA-GAA 930
|||| || || | ||||| |||||||||||| |||
Sbjct 1219 TGGACAAG-AAGC-TGAAGGAAGTAAAAGAAAAGAA 1252
> AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:1976918-1978553
FORWARD LENGTH=1082
Length=1082
Score = 150 bits (81), Expect = 2e-35
Identities = 230/299 (77%), Gaps = 22/299 (7%)
Strand=Plus/Plus
Query 651 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGA-GCCGTATT-TTTG 708
||||||||||||||||||||||||||||||||||| | || ||||| || || || ||||
Sbjct 633 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGATTCTGTGAAGC-GT-TTGTTTG 690
Query 709 AAAAACACCCAGAGACTGCATCAGAATGCCGTAC--AAAGAA-CCAAGATCTGA-GAACA 764
||||| ||| ||| | || |||| ||| ||| | ||| || ||| || ||| || |
Sbjct 691 AAAAAAACCTAGATATTGTATCAAAATTTCGT-CTTAAA-AATCCAT-ATTTGAAGA-C- 745
Query 765 T-CATACATGAATGTCCTCATAAGCGTAATC-AAGATGCTCT-TCAAAGGACCTGAGGAA 821
| | | ||||||| ||||| | || ||| | || | ||| | |||| | ||| | |||
Sbjct 746 TGCGTGCATGAATCTCCTCCTGAGTTTAACCGAA-ACGCTGTGTCAATCG-CCTCAAGAA 803
Query 822 CACTCCAAGGATGATCTGTCTGATGCAGAAGCTGCTCTGGCATACATGACACATGTAGGG 881
| |||||| |||| ||| |||||||||| | ||| |||||||| ||| | | ||||
Sbjct 804 CTCTCCAATGATGGTCTCTCTGATGCAGGTGTTGCACTGGCATATTTGATAGAAACAGGG 863
Query 882 TTTAAGTTGGATTGGTTGGAGAA-ACAACATGAAGAAGTAAAAGAAA-GAATGAAGAAA 938
|||||||||||||||||||||| | ||| ||| ||| |||| |||| ||| |||||||
Sbjct 864 CTTAAGTTGGATTGGTTGGAGAAGA-AACTTGATGAATTAAAGGAAAAGAA-GAAGAAA 920
> AT1G31370.1 | Symbols: | Ubiquitin-specific protease family
C19-related protein | chr1:11238298-11239363 REVERSE LENGTH=582
Length=582
Score = 117 bits (63), Expect = 2e-25
Identities = 111/133 (83%), Gaps = 7/133 (5%)
Strand=Plus/Plus
Query 651 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGA-GCCGTATT-TTTG 708
||||||||||||||||||||||||||||||||||| | | ||||| | || || ||||
Sbjct 331 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGA-GT-TTGTTTG 388
Query 709 AAAAACACCCAGAGACTGCATCAGAA-TGCCGTACAAAGAACCAAGATCTGAGAACATCA 767
|||| |||||||| | |||||| ||| | |||| ||||||||| | ||||||||||| ||
Sbjct 389 AAAAGCACCCAGACATTGCATC-GAAATTCCGTCCAAAGAACCCACATCTGAGAACAACA 447
Query 768 TACATGAAT-GTC 779
| | ||||| |||
Sbjct 448 TCCTTGAATAGTC 460
> AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:21597799-21599568
REVERSE LENGTH=1236
Length=1236
Score = 111 bits (60), Expect = 1e-23
Identities = 112/136 (82%), Gaps = 8/136 (6%)
Strand=Plus/Plus
Query 651 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGA-GCCGTATTTTTGA 709
||||||||||||||||||||||||||||||||||| | | ||||| || |||| |||||
Sbjct 624 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGC-GTATATTTGA 682
Query 710 AAAACACCCAGAGACTGCATCAGAA-TGCCGTACAAAGAA-CCAAGATCTGA-GAACATC 766
|| | ||||| | | |||||||||| | || | ||| ||| ||| | ||||| || |||
Sbjct 683 AATATACCCAAACATTGCATCAGAAGTCCCTT-CAATGAAACCATG-TCTGAAGA-CATT 739
Query 767 ATACATGAATGTCCTC 782
|||||||||||| |||
Sbjct 740 ATACATGAATGTACTC 755
> AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:21589071-21590401
REVERSE LENGTH=978
Length=978
Score = 110 bits (59), Expect = 4e-23
Identities = 111/135 (82%), Gaps = 8/135 (6%)
Strand=Plus/Plus
Query 651 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGAGCCGTATTTTTGAA 710
||||| ||||||||||||||||||||||||||||| | | |||||| ||||||||| ||
Sbjct 562 GATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGACGTATTTTTAAA 621
Query 711 AAACACCCAGAGACTGCA-TCAGAATGCC--GTACAAAGAACCAAGATCTGAG-AACATC 766
||||| ||||| | |||| | || || || ||| || ||||||| ||||||| || | |
Sbjct 622 AAACATCCAGACATTGCAGT-AGGATTCCAAGTA-AA-GAACCAACATCTGAGGAAAA-C 677
Query 767 ATACATGAATGTCCT 781
|| ||||||| ||||
Sbjct 678 ATTCATGAATTTCCT 692
> AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:11243191-11244392
REVERSE LENGTH=807
Length=807
Score = 93.5 bits (50), Expect = 4e-18
Identities = 105/132 (80%), Gaps = 2/132 (2%)
Strand=Plus/Plus
Query 651 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGAGCCGTATTTTTGAA 710
||| ||||||||||||||||||||||||||||||| | | ||||| | | | |||||
Sbjct 469 GATATCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAACAATCTCTTTGAG 528
Query 711 AAACACCCAGAGA-CTGCATCAGAATGCCGTACAAAGAACCAAGATCTGAGAACATCATA 769
|| |||||||| | | | |||||||| ||| | ||||||| | | |||||||| ||||
Sbjct 529 AAGCACCCAGACATC-GTATCAGAATTTCGTTCCAAGAACCCACTTATGAGAACAACATA 587
Query 770 CATGAATGTCCT 781
| |||||| |||
Sbjct 588 CTTGAATGACCT 599
> AT1G31380.1 | Symbols: | TRAF-like family protein | chr1:11240451-11241099
REVERSE LENGTH=528
Length=528
Score = 87.9 bits (47), Expect = 2e-16
Identities = 103/129 (80%), Gaps = 8/129 (6%)
Strand=Plus/Plus
Query 652 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGA-GCCGTATTTTTGAA 710
|||||||||||||||||||||||||||||||||| | ||||||| | || | ||||||
Sbjct 146 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATTTGTGAAGA-GTCTGTTTGAA 204
Query 711 AAACACCCAGAGA-CTGCATCAGAA-TGCCGTACA-AAGAACCAAGATCTGAGAACATCA 767
|| |||||||| | | | |||| || | || | | ||||||| | || |||||| | ||
Sbjct 205 AAGCACCCAGATATC-GAATCAAAACT-CCAT-CTGAAGAACCCACATATGAGAATAACA 261
Query 768 TACATGAAT 776
||| |||||
Sbjct 262 TACTTGAAT 270
> AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:11245225-11246481
REVERSE LENGTH=837
Length=837
Score = 71.3 bits (38), Expect = 2e-11
Identities = 67/81 (83%), Gaps = 2/81 (2%)
Strand=Plus/Plus
Query 652 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGAGCCGTATTTTTGAAA 711
|||||||||||||||||||||||||||||||||| | | ||||| | | | || |||
Sbjct 461 ATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAACAATCTCTTC-AAA 519
Query 712 AA-CACCCAGAGACTGCATCA 731
|| |||||||| | |||||||
Sbjct 520 AATCACCCAGACATTGCATCA 540
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53865184785
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5