BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg938835 Length=468 Score E Sequences producing significant alignments: (Bits) Value AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)... 217 9e-56 > AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr1:4348498-4350867 FORWARD LENGTH=1812 Length=1812 Score = 217 bits (117), Expect = 9e-56 Identities = 149/165 (90%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 100 GGTGGGGAACGGAGATCTGTTAGGAGACAAGGTTTGATAGAATCGGCGAGGTTTCTGAGT 159 |||||||||||||||||||| ||||||||||| |||| |||| | ||||||||||| ||| Sbjct 363 GGTGGGGAACGGAGATCTGTCAGGAGACAAGGGTTGAGAGAAGCTGCGAGGTTTCTTAGT 422 Query 160 TGTGCGAGTAGCGGACGTGTGATGAGGGAGCCATCTATGCTTGTGAGGGAGGCTGCGGCG 219 |||| ||||||||||| |||||| | |||||||||||||||||||| || || |||||| Sbjct 423 CGTGCTAGTAGCGGACGCGTGATGCGTGAGCCATCTATGCTTGTGAGAGAAGCCGCGGCG 482 Query 220 GAGCAGCTCGAGGAGAGGCAGAGCGATTGGGCTTATTTTAAGCCT 264 ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 483 GAGCAGCTCGAGGAGAGGCAGAGCGATTGGGCTTATTCGAAGCCT 527 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22253727121 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5