BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg939036
Length=2811
Score E
Sequences producing significant alignments: (Bits) Value
AT3G60030.1 | Symbols: SPL12 | squamosa promoter-binding protei... 4213 0.0
AT2G47070.1 | Symbols: SPL1 | squamosa promoter binding protein... 1140 0.0
> AT3G60030.1 | Symbols: SPL12 | squamosa promoter-binding protein-like
12 | chr3:22165654-22169572 REVERSE LENGTH=3148
Length=3148
Score = 4213 bits (2281), Expect = 0.0
Identities = 2645/2817 (94%), Gaps = 40/2817 (1%)
Strand=Plus/Plus
Query 4 TTGTAATC-GAGTTTGTGATGGAAGCTAGAATTGAAGGTGAAGAAGAAGGTCACAGTTTA 62
|||||| | | |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 146 TTGTAA-CTGGGTTTGTGATGGAAGCTAGAATTGAAGGTGAAGTAGAAGGTCACAGTTTA 204
Query 63 GAATATGGGTTTAGTGGTAAAAGGAGTGTAGAGTGGGATTTGAATGATTGGAAATGGAAT 122
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 205 GAATACGGGTTTAGTGGTAAAAGGAGTGTAGAGTGGGATTTGAATGATTGGAAATGGAAT 264
Query 123 GGTGATCTATTCGTTGCTACACAGTTGAATCATGGCTCATCGAACAGTTCTTCTACGTGC 182
|||||||| ||||||||||||||| ||||||| |||||||| ||||| ||||||||||||
Sbjct 265 GGTGATCTCTTCGTTGCTACACAGCTGAATCACGGCTCATCCAACAGCTCTTCTACGTGC 324
Query 183 TCTGATGAAGCAAATGTCGAAATCAT--------GGA-G--A-AGA---AGAAGAA-AAG 226
|||||||||| |||||| |||||||| ||| | | ||| ||||||| |||
Sbjct 325 TCTGATGAAGGAAATGTTGAAATCATGGAGAGAAGGAGGATAGAGATGGAGAAGAAGAAG 384
Query 227 ---AG--GAGCTGTTACTGTGATAGCAATGGAAGAAGATAACTTGAGGGATGGTGATGAT 281
|| |||||||||||||| |||||||||||||||||||||||| | ||||||
Sbjct 385 AAAAGAAGAGCTGTTACTGTGGTAGCAATGGAAGAAGATAACTTGA---A---AGATGAT 438
Query 282 GATGCTCATAGACTTACTTTGAATCTTGGTGG---TAATATTGAGGGAAATGGTGCGAAA 338
|||||||||||||||||| ||||||||||||| |||||||||||| ||||||| ||||
Sbjct 439 GATGCTCATAGACTTACTCTGAATCTTGGTGGTAATAATATTGAGGGGAATGGTGTGAAA 498
Query 339 AAGACGAAACTTGGAGGAGGGATTCCGAGTCGGGCGATTTCTTGTCAGGTGGAGAACTGT 398
|||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||
Sbjct 499 AAGACGAAACTTGGAGGAGGGATTCCGAGTCGGGCGATTTGTTGTCAGGTAGACAACTGT 558
Query 399 GGAGTTGATTTAAGCAAGGTTAAGGATTATCATAGACGTCATAAGGTTTGTGAGATGCAT 458
|||| |||||||||||| ||||||||||||||||||||||||||||| |||||||| |||
Sbjct 559 GGAGCTGATTTAAGCAAAGTTAAGGATTATCATAGACGTCATAAGGTCTGTGAGATTCAT 618
Query 459 TCTAAAGCTACTAGTGCACTTGTTGGAGGAATTATGCAGAGGTTTTGTCAGCAGTGTAGT 518
||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 619 TCTAAAGCTACTACTGCACTTGTTGGAGGAATTATGCAGCGGTTTTGTCAGCAATGTAGT 678
Query 519 AGGTTTCATGTGCTTGAAGAGTTTGATGAAGGAAAGAGAAGTTGTCGTAGACGTTTGGCT 578
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 679 AGGTTTCATGTGCTTGAAGAGTTTGATGAGGGAAAGAGAAGTTGCCGTAGACGTTTGGCT 738
Query 579 GGGCATAATAAGCGTAGAAGGAAAGCAAATCCTGATACTATAGGCAATGGGAATCCTTTG 638
|||||||||||||||||||| ||||||||||||||||||||||||||||||| | || ||
Sbjct 739 GGGCATAATAAGCGTAGAAGAAAAGCAAATCCTGATACTATAGGCAATGGGACTTCTATG 798
Query 639 AGTGATGATCAAACAAGCAATTATCTGTTGATTACTCTCTTGAAGATACTCTCCAAT-TT 697
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 799 AGTGATGATCAAACAAGCAATTATATGTTGATTACTCTCTTGAAGATACTCTCCAATATT 858
Query 698 ACATTCGAATCAATCAGATCAAACGGGTGATCAGGATCTGTTGTCTCAACTTCTAAAGAG 757
||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||||
Sbjct 859 -CATTCGAATCAGTCGGATCAAACGGGTGATCAGGATCTACTGTCTCATCTTCTAAAGAG 917
Query 758 TCTTGTAAGCCAAGCTGGTGAACATATAGGGAAGAATTTAGTTGGGCTTCTACAGGGTGG 817
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 918 CCTTGTAAGCCAAGCTGGTGAACATATAGGGAGGAATTTAGTTGGGCTTCTACAGGGTGG 977
Query 818 AGGAGGAGTCCAGGCTTCTCAAAATATTGGAAACTCGTCGGATTTGCTTTCACTCGAGCA 877
||||||| ||||||||||||||||||||||||||| || | |||||| |||||||||||
Sbjct 978 AGGAGGACTCCAGGCTTCTCAAAATATTGGAAACTTATCCGCTTTGCTCTCACTCGAGCA 1037
Query 878 AGCCCCTCGAGAGAATATAAAGCATCATTCAGTGCCTGAAACACATTGGCAAGAAGTGTT 937
||||||||||||| ||||||| |||||||||||| ||||||| | ||||||||||||||
Sbjct 1038 AGCCCCTCGAGAGGATATAAAACATCATTCAGTGTCTGAAACGCCTTGGCAAGAAGTGTA 1097
Query 938 TGCCAATGGTGCTCAAGAGACAGCTGCCCCGGATAGG-CCGGAGAAAGAAGTCAAAATGA 996
||||||| |||||||||||| || ||||||||||||| || |||||| |||||||| |||
Sbjct 1098 TGCCAATAGTGCTCAAGAGAGAGTTGCCCCGGATAGGTCC-GAGAAACAAGTCAAAGTGA 1156
Query 997 ATGATTTTGATTTGAATGATATCTACATAGACTCAGATGATACTACAGATATAGAGAGAT 1056
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1157 ATGATTTTGATTTGAATGACATCTACATAGACTCAGATGATACCACAGATATAGAGAGAT 1216
Query 1057 CATCAGCTCCTCCCACAAATCCAGCAACTAGTTCTCTTGATTATCATCAAGACTCGCGTC 1116
||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1217 CATCACCTCCTCCGACAAATCCAGCTACTAGTTCTCTTGATTATCATCAAGACTCGCGTC 1276
Query 1117 AGTCTAGTCCACCTCAAACTAGTAGGAGGAATTCAGATTCAGCTTCTGACCAATCACCTT 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1277 AGTCTAGTCCACCTCAAACTAGTAGGAGGAATTCAGATTCAGCTTCTGACCAATCACCTT 1336
Query 1177 CAAGTTCCGGTGGAGATGCTCAGAGCCGTACTGACCGGATTGTGTTCAAACTATTTGGGA 1236
|||||||| |||||||||| |||||||||||||| ||||||||||||||||| |||||||
Sbjct 1337 CAAGTTCCAGTGGAGATGCACAGAGCCGTACTGATCGGATTGTGTTCAAACTCTTTGGGA 1396
Query 1237 AAGAGCCGAATGATTTTCCAGTTGCCTTACGAGGACAGATTTTTAACTGGTTAGCTCATA 1296
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 1397 AAGAGCCGAATGATTTTCCAGTTGCCTTACGAGGACAGATTCTTAACTGGTTAGCGCATA 1456
Query 1297 CTCCAACTGACATGGAGAGCTATATTAGACCTGGTTGTATCGTTTTGACCATTTATCTTC 1356
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1457 CTCCAACTGATATGGAGAGCTACATTAGACCTGGTTGTATCGTTTTGACCATTTATCTTC 1516
Query 1357 GTCAAGATGAAGCTTCTTGGGAAGAACTTTGTTGTGATCTGAGTTTCAGCTTGAGGAGGC 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1517 GTCAAGATGAAGCTTCTTGGGAAGAACTTTGTTGTGATCTGAGTTTCAGCTTGAGGAGGC 1576
Query 1417 TTCTAGATCTCTCAGATGATCCTTTATGGACTGATGGGTGGATTTATCTTAGGGTGCAAA 1476
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1577 TTCTAGATCTTTCAGATGATCCTTTATGGACTGATGGGTGGCTTTATCTTAGGGTGCAAA 1636
Query 1477 ACCAACTCGCATTTGCGTTTGATGGTCAGGTTGTTCTTGACACATCTTTACCTCTGAGAA 1536
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1637 ACCAACTCGCATTTGCGTTTAATGGTCAGGTTGTTCTTGACACATCTTTACCTCTGAGAA 1696
Query 1537 GCCATGATTATAGCCAAATCATTGCTGTTAGACCGCTTGCTGTAACAAGGAAAGCTCAAT 1596
||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||
Sbjct 1697 GCCATGATTATAGCCAAATCATTACTGTTAGACCACTTGCTGTAACAAAGAAAGCTCAAT 1756
Query 1597 TTACAGTAAAAGGCATCAATCTCCGTCGACCTGGCACAAGGTTACTTTGTGCTGTAGAAG 1656
|||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 1757 TTACAGTAAAAGGCATCAATCTCCGTCGACCTGGCACAAGGTTACTTTGTACTGTTGAAG 1816
Query 1657 GAACATACTTGGTTCAGGAAGCAACACAAGGAGTGATGGAAGAGAGAGATGATCTTAGGG 1716
||||| ||||||||||||||||||||||||||| |||||| |||||||||||||| | ||
Sbjct 1817 GAACACACTTGGTTCAGGAAGCAACACAAGGAGGGATGGAGGAGAGAGATGATCTAAAGG 1876
Query 1717 TGAATAATGAGATTGATTTTGTCAAATTTTCCTGTGAGATGCCTATTGCAAGTGGTCGAG 1776
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1877 AGAATAATGAGATTGATTTTGTCAATTTTTCCTGTGAGATGCCTATTGCAAGTGGTCGAG 1936
Query 1777 GTTTCATGGAAATTGAAGATCAAGGCGGGCTAAGCAGTAGTTAT-TTCCCTTTCATAGTA 1835
||||||||||||||||||| ||||| |||||||||||||||| | |||||||||||||||
Sbjct 1937 GTTTCATGGAAATTGAAGACCAAGGTGGGCTAAGCAGTAGTT-TCTTCCCTTTCATAGTA 1995
Query 1836 TCTGAGGACGAAGATGTTTGTTCTGAAATCCGAAGACTCGAAAGCACATTAGAGTTTACC 1895
||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 TCTGAAGACGAAGATATTTGTTCTGAAATCCGAAGACTCGAAAGCACATTAGAGTTTACT 2055
Query 1896 GGTACTGATTCTGCAATGCAAGCAATGGATTTCATCCACGAAATCGGTTGGCTTCTTCAC 1955
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2056 GGAACTGATTCTGCAATGCAAGCAATGGATTTCATCCACGAAATCGGTTGGCTTCTACAC 2115
Query 1956 AGAAGTGAACTCAAGTCAAGACTTGCAGCATCAGATCATAATCCAGAGGATCTGTTTCCT 2015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2116 AGAAGTGAACTCAAGTCAAGACTTGCAGCATCAGATCATAATCCAGAGGATCTGTTTTCT 2175
Query 2016 TTAATACGGTTTAAGTTTCTAGTAGAGTACTCAATGGACCGGGAATGGTA-TGCTGTGAT 2074
||||||||||||||||||||| |||||| |||||||||||||||||||| || ||||||
Sbjct 2176 TTAATACGGTTTAAGTTTCTAATAGAGTTCTCAATGGACCGGGAATGGTGCTG-TGTGAT 2234
Query 2075 CAAGAAGCTATTAAATATACTATTCGAAGAAGGCACTGTTGATCCATCTCCTGATGCTGC 2134
|||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2235 GAAGAAGTTATTGAATATTCTATTCGAAGAAGGCACTGTTGATCCATCTCCTGATGCTGC 2294
Query 2135 GTTATCAGAACTGTGTCTTCTTCACAGAGCCGTAAGGAAAAATTCAAAACCCATGGTTGA 2194
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2295 GTTATCAGAACTGTGTCTTCTTCACAGAGCCGTGAGGAAAAATTCAAAACCCATGGTTGA 2354
Query 2195 GATGCTTCTAAGATTCATTCCCAAGAAGAAGAACCAGACATCATCCGGTTTGTTTAGACC 2254
||||||||| ||||||| ||||||||||||||| ||||||| | ||||||||||||||||
Sbjct 2355 GATGCTTCTTAGATTCAGTCCCAAGAAGAAGAATCAGACATTAGCCGGTTTGTTTAGACC 2414
Query 2255 CGATGCAGCTGGTCCAGGCGGTTTAACACCGCTTCACATTGCAGCTGGTAAAGACGGGTC 2314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2415 CGATGCAGCTGGTCCAGGCGGTTTAACACCGCTTCACATTGCAGCTGGTAAAGACGGTTC 2474
Query 2315 AGAAGATGTGTTGGATGCTCTTACTGAGGATCCCGAAATGATTGGTATTCAAGCTTGGAA 2374
|||||||||||||||||| || ||||||||||| | ||||| |||||||||||| |||||
Sbjct 2475 AGAAGATGTGTTGGATGCCCTGACTGAGGATCCTGGAATGACTGGTATTCAAGCCTGGAA 2534
Query 2375 GATTTCCCGGGACAATACCGGATTCACACCAGAAGACTACGCACGTTTACGAGGTCACTT 2434
| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2535 AAATTCCCGGGACAATACCGGATTCACACCAGAAGACTATGCACGTTTACGAGGTCACTT 2594
Query 2435 CTCATATATTCATCTGGTGCAACGGAAACTCAATCGGAAACCAACCGCCGAAGAACACGT 2494
||| |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||
Sbjct 2595 CTCGTATATTCATCTGGTGCAACGGAAACTCAGTCGGAAACCAATCGCCAAAGAACACGT 2654
Query 2495 GGTGGTCAACATTCCTGAGTCTTTCAACATTGAGCACAAACAAGAAAAGAGGAGTCTAAT 2554
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2655 GGTGGTCAACATTCCTGAGTCTTTCAACATTGAGCACAAACAAGAAAAGAGGAGTCCAAT 2714
Query 2555 GGATTCTTCAAGCTTGTCGATAAGTCAGATAAACCAATGTAAGCTCTGTGATCACAAACG 2614
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 2715 GGATTCTTCAAGCTTGGAGATAACACAGATAAACCAATGTAAGCTCTGTGATCACAAACG 2774
Query 2615 TGTGTTTGTCACCACGCAACACAAGTCTCTTGCCTACAGGCCAGCGATGCTTTCGATGGT 2674
|||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||||
Sbjct 2775 TGTGTTTGTCACAACGCACCACAAGTCTGTTGCCTACAGGCCAGCAATGCTTTCGATGGT 2834
Query 2675 AGCGATAGCAGCGGTTTGCGTTTGTGTCGCCCTTTTGTTCAAGAGTTGCCCGGAAGTGCT 2734
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2835 AGCGATAGCAGCGGTTTGCGTTTGTGTCGCTCTTTTGTTCAAGAGTTGCCCGGAAGTGCT 2894
Query 2735 ATATGTCTTTCAGCCGTTCAGGTGGGAATTGCTTGAATATGGAACAAGCTAGTAAAA 2791
||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct 2895 ATATGTCTTTCAGCCATTCAGGTGGGAATTACTTGAGTATGGAACAAGCTAGTAAAA 2951
> AT2G47070.1 | Symbols: SPL1 | squamosa promoter binding protein-like
1 | chr2:19336695-19340869 FORWARD LENGTH=3412
Length=3412
Score = 1140 bits (617), Expect = 0.0
Identities = 1476/1871 (79%), Gaps = 137/1871 (7%)
Strand=Plus/Plus
Query 981 AAAGAAGTCAAAATGAATGATTTTGATTTGAATGATATCTACATAGACTCAGATGATACT 1040
||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1314 AAACAAGTCAAAATGAATGATTTTGATTTGAATGATATCTATATAGACTCAGATGA--C- 1370
Query 1041 ACAGATATAGAGAGATCATCAGCTCCTCCCACAAATCCAGCAACTAGTTCTCTTGATTAT 1100
||||| | || ||||| || ||||||| || |||||||| || |||||||||||||||
Sbjct 1371 ACAGACGTCGAAAGATC-TC--CTCCTCCAACGAATCCAGCGACCAGTTCTCTTGATTAT 1427
Query 1101 CAT-CAAG-ACTCGCGTCAGTCTAGTCCACCTCAAACTAGTAGGAGGAATTCAGATTCAG 1158
| | || | | | | |||||||||||| ||||| || ||||||| | |||||||||||
Sbjct 1428 CCTTCATGGA-TA-CATCAGTCTAGTCCGCCTCAGACAAGTAGGA--A-TTCAGATTCAG 1482
Query 1159 CTTCTGACCAATCACCTTCAAGTTCCGGTGGAGATGCTCAGA-GCCGTACTGACCGGATT 1217
| |||||||| ||||| |||||||| ||| ||||||||||| || | || | |||||||
Sbjct 1483 CATCTGACCAGTCACCCTCAAGTTCTAGTGAAGATGCTCAGATGC-GCACAGGCCGGATT 1541
Query 1218 GTGTTCAAACTATTTGGGAAAGAGCCGAATGATTTTCC-AGTTGCCTTACGAGGACAGAT 1276
|||||||||||||||||||||||||| ||||| ||||| | ||| |||||||||||||||
Sbjct 1542 GTGTTCAAACTATTTGGGAAAGAGCCAAATGAATTTCCTA-TTGTCTTACGAGGACAGAT 1600
Query 1277 TTTTAACTGGTTAGCTCATACTCCAACTGACATGGAGAGCTATATTAGACCTGGTTGTAT 1336
| || |||||||| | |||| ||||||||||||||||||||| || |||||||| |||||
Sbjct 1601 TCTTGACTGGTTATCGCATAGTCCAACTGACATGGAGAGCTACATAAGACCTGGCTGTAT 1660
Query 1337 CGTTTTGACCATTTATCTTCGTCAAGATGAAGCTTCTTGGGAAGAACTTTGTTGT-GATC 1395
||| |||||||| ||||||||||||| |||| || ||||||||||||||| | ||||
Sbjct 1661 CGTATTGACCATCTATCTTCGTCAAGCTGAAACTGCTTGGGAAGAACTTTCA-GACGATC 1719
Query 1396 TGAGTTTCAGCTTGAGG-AGGCTTCTAGATCTCTCAGATGATCCTTTATGGACTGA-TGG 1453
|| |||| ||||| ||| | ||||||||||||||| |||||||| || ||||| | |||
Sbjct 1720 TGGGTTTTAGCTT-AGGGAAGCTTCTAGATCTCTCCGATGATCCCTTGTGGACA-ACTGG 1777
Query 1454 GTGGATTTATCTTAGGGTGCAAAACCAACTCGCATTTGCGTTTGATGGTCAGGTTGTTC- 1512
||||||||| |||||||||| |||||||| ||||||| | | | ||||||||||| |
Sbjct 1778 ATGGATTTATGTTAGGGTGCAGAACCAACTTGCATTTGTATATAACGGTCAGGTTGT-CG 1836
Query 1513 TTGACACATCTTTACCTCTGAGAAGCCATGATTATAGCCAAATCATT-GCTGTTAGACCG 1571
||||||| || || |||| | ||| | ||||||||| || |||||| || |||| ||||
Sbjct 1837 TTGACACTTCATTGTCTCTAAAAAGTCGTGATTATAGTCACATCATTAGC-GTTAAACCG 1895
Query 1572 CTTGCTGTAAC---AA-GGA-AAG-CTCAATTTACAGTAAAAGGCATCAATCTCCGTCGA 1625
|||||| || | || ||| ||| ||||||||||||| |||||||| |||||||||| |
Sbjct 1896 CTTGCTATAGCTGCAACGGAGAAGGCTCAATTTACAGTTAAAGGCATGAATCTCCGTC-A 1954
Query 1626 CC-TGGCACAAGGTTACTTTGTGCTGTAGAAGGAACATACTTGGTTCAGGAAGCAACACA 1684
| ||||||||||||||||||| |||| ||||||| ||||||| |||||||| |||||||
Sbjct 1955 GCGTGGCACAAGGTTACTTTGTTCTGTTGAAGGAAAATACTTGATTCAGGAAACAACACA 2014
Query 1685 AGGAGT-GATGGA--AGAGAG-A-GATGATCTT-AGGGTGAATAATGAGATTGATT---T 1735
| | | || | | || ||| | || ||| || | || || | |||||||| || |
Sbjct 2015 CG-ATTCGACG-ACCAGGGAGGATGACGAT-TTCAAGGACAACAGTGAGATTG-TTGAGT 2070
Query 1736 -TGTCAAATTT-TCCTGTGAGATGCCTAT-T-GCAAGTGGTCGAGGTTTCATGGAAATTG 1791
||| ||| || || ||||| |||||||| | | | |||||||||| |||||||| ||||
Sbjct 2071 GTGT-AAACTTCTCTTGTGATATGCCTATATTG-A-GTGGTCGAGGATTCATGGAGATTG 2127
Query 1792 AAGATCAAGGCGGGCTAAGCAGTAG-TTATTTCCCTTTCATAGTA-TCTGAGGACGAAGA 1849
|||| ||||| || || || || || || ||||||| |||| | ||| || || ||
Sbjct 2128 AAGACCAAGGA---CTCAGTAGCAGCTTCTT-CCCTTTCTTAGTGGT-TGAAGATGACGA 2182
Query 1850 TGTTTGTTCTGAAATCCGAAGACTCGAAAGCACATTAGAGTTTACCGGTACTGATTCTGC 1909
|||||||||||||||||| | ||| |||| |||||||||||| || || |||||||||||
Sbjct 2183 TGTTTGTTCTGAAATCCGTATACTTGAAACCACATTAGAGTTCACTGGAACTGATTCTGC 2242
Query 1910 -AATGCAAGCAATGGATTTCATCCACGAAATCGGTTGGCTTCTTCACAGAAGTGAACTCA 1968
|| |||||| ||||||||||| || ||||||||||||||||||||||||||| ||||
Sbjct 2243 TAA-GCAAGCTATGGATTTCATACATGAAATCGGTTGGCTTCTTCACAGAAGTAAACTTG 2301
Query 1969 AGTCAAGACTTGCAGCATCAGATC-ATAATCCAGAG-GATCTGTTTCCTTTAATACGGTT 2026
| | | | |||||| | | ||||||| | | | | || || |||||||| ||
Sbjct 2302 -G----G----G-A--ATCAGACCCA-AATCCAG-GCG-T-T-TTCCCATTAATACGCTT 2344
Query 2027 TAAGTTTCTAGTAGAGTACTCAATGGACCGGGAATGGTATGCTGTGATCAAGAA-GCTAT 2085
||| ||| | |||| ||||||||| || || |||| |||||||||| ||| |||||
Sbjct 2345 CCAGTGGCTAATCGAGTTCTCAATGGATCGAGAGTGGTGCGCTGTGATCA-GAAAGCTAT 2403
Query 2086 TAAATATACTATTCGAAGAAGGCACT-GTTGA-TC--CATC-TCCTG-A-TGCTGCGTTA 2138
|||| || | || || | || | | | ||| | | || |||| | ||| | |
Sbjct 2404 TAAACATGTTCTTTGATGGAG-CTGTTGGTGAATTTTCTTCCTCCTCTAATGCCACACTG 2462
Query 2139 TCAGAACTGTGTCTTCTTCACAGAGCCGTAAGGAAAAATTCAAAACCCATGGTTGAGATG 2198
||||||||||| ||||||||||||||||| |||||||| || || || |||||||| |||
Sbjct 2463 TCAGAACTGTGCCTTCTTCACAGAGCCGTGAGGAAAAACTCTAAGCCTATGGTTGAAATG 2522
Query 2199 CTTCTA-AGAT-TCATTCCCAAGAAGAAGAACCAGACATCATCCGGTTTGTTTAGACCCG 2256
|| || |||| | ||||||||| | | || ||| | || | || |||||||||||
Sbjct 2523 CT-CTTGAGATAT-ATTCCCAAGCA-AC-AA--AGAAA-CAGC---TT-GTTTAGACCCG 2571
Query 2257 ATGCAGCTGGTCCAGGCGGTTTAACACCGCTTCACATTGCAGCTGGTAAAGACGGGTCAG 2316
|||| |||||||||| ||| |||||||| ||||| |||||||||||||||||||| ||||
Sbjct 2572 ATGCTGCTGGTCCAGCCGGCTTAACACCTCTTCATATTGCAGCTGGTAAAGACGGTTCAG 2631
Query 2317 AAGATGTGTTGGATGCTCTTACTGAGGATCCCGAAATGATTGGTATTCAAGCTTGGAAGA 2376
|||||||||||||||| || || || ||||| | |||| | || ||| |||| |||||||
Sbjct 2632 AAGATGTGTTGGATGCGCTAACAGAAGATCCTGCAATGGTGGGGATTGAAGCGTGGAAGA 2691
Query 2377 TTTCCCGGGACAATACCGGATTCACACCAGAAGACTACGCACGTTTACGAGGTCACTTCT 2436
| || |||| || || ||||||||||||||||||||||| ||||| ||||||||||
Sbjct 2692 CATGTCGAGACAGCACAGGCTTCACACCAGAAGACTACGCACGCTTACGCGGTCACTTCT 2751
Query 2437 CATATATTCATCTGG-TGCAACGGAA-ACTCAATCGGAAAC-CAACCGCCGAAGAACACG 2493
|||| || || || | | ||||| || | ||||| ||| |||| | ||||| || |
Sbjct 2752 CATACATCCA-CTTGATTCAACGCAAGA-TCAATAA-AAAGTCAACAACTGAAGATCATG 2808
Query 2494 TGGTGGTCAACATTCCTGAGTCTTTC--A-ACATTGAGCACAAACAAG-AAAAG-AGGAG 2548
| ||||||||||| || | |||||| | ||| ||||| ||| || |||| |||
Sbjct 2809 TTGTGGTCAACATCCCAGTTTCTTTCTCAGACAGAGAGCAGAAAGAACCAAAATCAGG-- 2866
Query 2549 TCTAATGGATTCTTCAAGC-TTGTCGATAAGTCAGATAAACCAATGTAAGCTCTGTGATC 2607
|| |||| ||||| || ||| ||| | ||||| ||| || ||||||||||| |
Sbjct 2867 TCCGATGG---CTTCA-GCCTTGGAGATCACACAGATT--CCA-TGCAAGCTCTGTGACC 2919
Query 2608 ACAAACGTG-TGTTTGTCACCACGCAACACAAGTCTCTTGCCTACAGGCCAGCGATGCTT 2666
| |||| || ||| || || || | | || |||| | || ||||| ||||| ||| ||
Sbjct 2920 ATAAAC-TGGTGTATGGGACAAC--A-CGCAGGTCTGTAGCGTACAGACCAGCTATG-TT 2974
Query 2667 -TCGATGGTAGCGATAGCAGCGGTTTGCGTTTGTGTCGCCCTTTTGTTCAAGAGTTGCCC 2725
|| ||||| ||||| || ||||||||||| ||||| || ||| |||| |||||||||||
Sbjct 2975 GTCAATGGTGGCGATTGCTGCGGTTTGCGTCTGTGTGGCACTTCTGTTTAAGAGTTGCCC 3034
Query 2726 GGAAGTGCTATATGTCTTTCAGCCGTTCAGGTGGGAATTGCTTGAA-TATGGAACAAGCT 2784
||||||||| ||||| ||||| |||||||||||||| || ||| | |||||||||||||
Sbjct 3035 GGAAGTGCTCTATGTGTTTCAACCGTTCAGGTGGGAGTTA-TTGGACTATGGAACAAGCT 3093
Query 2785 -AGTAAAAGTC 2794
||| |||||
Sbjct 3094 GAGTGTAAGTC 3104
Score = 377 bits (204), Expect = 3e-103
Identities = 431/534 (81%), Gaps = 42/534 (8%)
Strand=Plus/Plus
Query 380 TTGTCAGGTGGAGAACTGTGGAGTTGAT-TTAAGCAAGGTTAAGGATTATCATAGACGTC 438
||||||||| || ||||||| || |||| || || || |||||||||||||||||||| |
Sbjct 764 TTGTCAGGTCGAAAACTGTGAAGCTGATCTT-AGTAAAGTTAAGGATTATCATAGACGCC 822
Query 439 ATAAGGTTTGTGAGATGCATTCTAAAGCTACTAGTG-CACTTGTTGGAGGAAT-TATGCA 496
||||||| |||||||||||||| || |||||||||| ||| ||| ||||| || | ||||
Sbjct 823 ATAAGGTCTGTGAGATGCATTCCAAGGCTACTAGTGCCAC-TGTCGGAGGTATCT-TGCA 880
Query 497 GAGGTTTTGTCAGCAGTGTAGTAGGTTTCATGTGCTTGAAGAGTTTGATGAAGGAAAGAG 556
| | ||||||||||| ||||||||||| ||| | ||| | ||||||||||||||||||||
Sbjct 881 GCGCTTTTGTCAGCAATGTAGTAGGTTCCATCTTCTTCAGGAGTTTGATGAAGGAAAGAG 940
Query 557 AAGTTGTCGTAGACGTTTGGCTGGGCATAATAAGCGTAGAAGGAAAGCAAATCCTGATAC 616
|||||||||||||||||||||||| |||||||| ||| | |||||| ||||||| || ||
Sbjct 941 AAGTTGTCGTAGACGTTTGGCTGGCCATAATAAACGTCGGAGGAAAACAAATCCCGA-AC 999
Query 617 TATAG-GC-AATGGGAATCCTTTGAGTGATGATCAAACAAGCAATTATCTGTTGATTACT 674
| | || || ||||||||| ||||||||||| ||||||| ||||| |||||||||
Sbjct 1000 C-TGGCGCTAACGGGAATCCT---AGTGATGATCACTCAAGCAACTATCTCTTGATTACT 1055
Query 675 CTCTTGAAGATACTCTCCAATTTACATTCGAATCAATCAGATCAAACGGGTGATCAGGAT 734
||||||||||||||||||||| | ||| || || | | | ||| |||||| |||
Sbjct 1056 CTCTTGAAGATACTCTCCAATATGCAT---AACCA-T-A---C---CGG-TGATCAAGAT 1103
Query 735 CTGTTGTCTCAACTTCTAAAGAGTCTTGTAAGCCAAGCTGGTGAACA-TATAGGGAAGAA 793
|| ||||||| ||||| ||||| || |||||||| ||||| ||||| | ||||||| ||
Sbjct 1104 TTGATGTCTCATCTTCTGAAGAGCCTCGTAAGCCATGCTGGCGAACAGT-TAGGGAAAAA 1162
Query 794 TTTAGTTGGGCTTCTAC-AGGGTGGAGGAGGAGTC-CA-GGCTTC-TCAAAATATTGGAA 849
||||||| ||||| | | ||||||||| || || || ||| | ||| ||||||||
Sbjct 1163 CTTAGTTGAACTTCTTCTACAA-GGAGGAGGA-TCTCAAGG-TTCCTTAAA-TATTGGAA 1218
Query 850 ACTCGTCGGATTTGCTTTC-ACTCGAGCAAGCCCCTCGAGAGAA-TATAAAGCA 901
||||| | ||||||| | | |||||||| |||| |||| | | |||||||
Sbjct 1219 ACTCGGC---TTTGCTTGGGATT-GAGCAAGCTCCTCAAGAGGAGT-TAAAGCA 1267
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 139664769312
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5