BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg939192

Length=352
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G61760.1 | Symbols: ADL1B, DL1B | DYNAMIN-like 1B | chr3:228...   163    9e-40


> AT3G61760.1 | Symbols: ADL1B, DL1B | DYNAMIN-like 1B | chr3:22860514-22864153 
REVERSE LENGTH=1926
Length=1926

 Score =  163 bits (88),  Expect = 9e-40
 Identities = 94/97 (97%), Gaps = 0/97 (0%)
 Strand=Plus/Plus

Query  145  AAGGAAGGGGATACAAATTAAGGTATCCTTGGGTTGATGTTGTAAACTGGTCTCAAGCTG  204
            |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct  741  AAGGAAGGGGATACAAATTAAGGTATCCTTGGGTTGGTGTTGTAAACCGGTCTCAAGCTG  800

Query  205  ACATTAATATAAGTGTTGATATGATTGCTGCTCGTCG  241
            ||||||||| |||||||||||||||||||||||||||
Sbjct  801  ACATTAATAAAAGTGTTGATATGATTGCTGCTCGTCG  837



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 16487821672


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5