BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg939279

Length=515
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G10490.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-depen...   222    2e-57


> AT4G10490.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-dependent 
oxygenase superfamily protein | chr4:6483867-6485360 
FORWARD LENGTH=1261
Length=1261

 Score =  222 bits (120),  Expect = 2e-57
 Identities = 155/172 (90%), Gaps = 2/172 (1%)
 Strand=Plus/Plus

Query  135  GTGTCCTCAACCGGAGCTAACTTACGGACTTCCGACACATAAAGATTCAATTTTGATCAT  194
            |||||||||||| |||||||||||||||||||||   ||||||||| |||  ||||||| 
Sbjct  651  GTGTCCTCAACCAGAGCTAACTTACGGACTTCCGGGGCATAAAGATGCAAACTTGATCAC  710

Query  195  TGTTCTTCTTCAAGACGAAGTCTCTGGTTTACAGGTGTTTAAAGATGGTAAATGGGTTGT  254
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | | 
Sbjct  711  TGTTCTTCTTCAAGATGAAGTCTCTGGTTTACAGGTGTTTAAAGATGGTAAATGGATCGC  770

Query  255  TGTTCATTCTGTTCCCAACACATTT-ATAGTCAATCTTGGTGACCAAATGCA  305
            |||| || ||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct  771  TGTTAATCCTGTTCCCAACAC-TTTCATAGTCAACCTTGGTGACCAAATGCA  821



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 24614732030


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5