BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg939339 Length=252 Score E Sequences producing significant alignments: (Bits) Value AT3G62460.1 | Symbols: | Putative endonuclease or glycosyl hyd... 368 1e-101 AT3G62530.1 | Symbols: | ARM repeat superfamily protein | chr3... 291 3e-78 > AT3G62460.1 | Symbols: | Putative endonuclease or glycosyl hydrolase | chr3:23104665-23105624 REVERSE LENGTH=868 Length=868 Score = 368 bits (199), Expect = 1e-101 Identities = 209/214 (98%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 1 CATCTCTCTCGTCTTCCTTTACGCCGTCAAAACCATGTTTCTAAGTCAGTGCCGGAGCTG 60 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 12 CATCTCTCTCGTCTTCCTTTACTCCGTCAAAACCATGTTTCTAAGTCAGTGCCGGAGCTG 71 Query 61 TAAACCTTTGCTCGAGTCTCGTCTACCTTTGCTCCGCctctctctctctAAATGTCTCGA 120 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 72 TAAACCTTTGCTCGAGTCTCGTATACCTTTGCTCCGCCTCTCTCTCTCTAAATGTCTCGA 131 Query 121 TCAGTCCTTCAAAACCACGGCTAGTAGCGAATACGGGAGTAAGATCCCTGATGCTCTTCT 180 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 132 TCAGTCCTTCAAAACCACGGCTAGTAGCGAATACGGTAGTAAGATCCCTGATGCTCTTCT 191 Query 181 GGGACATCGACGACTAGAAGATCATAAGGCAAGC 214 |||||||||| |||| |||||||||||||||||| Sbjct 192 GGGACATCGAAGACTGGAAGATCATAAGGCAAGC 225 > AT3G62530.1 | Symbols: | ARM repeat superfamily protein | chr3:23132138-23133298 FORWARD LENGTH=924 Length=924 Score = 291 bits (157), Expect = 3e-78 Identities = 163/166 (98%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 1 CATCTCTCTCGTCTTCCTTTACGCCGTCAAAACCATGTTTCTAAGTCAGTGCCGGAGCTG 60 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct 48 CATCTCTCTCGTCTTCCTTTACTCCGTCAAAACCATGTTTCTAAGTCAGTTCCGGAGCTG 107 Query 61 TAAACCTTTGCTCGAGTCTCGTCTACCTTTGCTCCGCctctctctctctAAATGTCTCGA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108 TAAACCTTTGCTCGAGTCTCGTCTACCTTTGCTCCGCCTCTCTCTCTCTAAATGTCTCGA 167 Query 121 TCAGTCCTTCAAAACCACGGCTAGTAGCGAATACGGGAGTAAGATC 166 |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 168 TCAGTCCTTCAAAACCACGGCTAGTAGCGAATACGGTAGTAAGATC 213 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11461046772 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5