BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg939446
Length=3358
Score E
Sequences producing significant alignments: (Bits) Value
AT3G63460.1 | Symbols: | transducin family protein / WD-40 rep... 5716 0.0
AT1G18830.1 | Symbols: | Transducin/WD40 repeat-like superfami... 712 0.0
> AT3G63460.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:23430644-23437344 REVERSE LENGTH=3783
Length=3783
Score = 5716 bits (3095), Expect = 0.0
Identities = 3264/3348 (97%), Gaps = 2/3348 (0%)
Strand=Plus/Plus
Query 12 CCGATTCCAATATGGCTTGCATCAAGGGGGTGGGCAGATCCGCCTCCGTTGCCCTGGCTC 71
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 93 CCGATTCCAATATGGCTTGCATCAAGGGGGTGGGCCGATCCGCCTCCGTTGCCCTGGCTC 152
Query 72 CCGACGCTCCTTACATGGCCGCCGGAACCATGGCCGGAGCCGTCGATCTCTCCTTTAGCT 131
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 153 CCGATGCTCCTTACATGGCCGCCGGAACCATGGCCGGAGCCGTCGATCTCTCCTTTAGCT 212
Query 132 CTTCCGCCAATCTCGAGATCTTTAAGCTCGACTTTCAGTCTGACGATCGCGATTTGCCTC 191
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 213 CTTCCGCCAATCTCGAGATCTTTAAGCTCGACTTTCAGTCTGACGATCGCGACTTGCCTC 272
Query 192 TCGTTGGGGAAAGCCCCAGCTCCGAGCGCTTCCATAGACTCGCCTGGGGAAGAAACGGAT 251
|||| ||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 273 TCGTCGGGGAAATCCCCAGCTCCGAGCGGTTCAATAGACTCGCCTGGGGAAGAAACGGAT 332
Query 252 CTGGATCCGAGGAATTCTCCCTCGGTCTTATTGCCGGCGGCCTTGTCGACGGAAATATAG 311
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 333 CTGGATCCGAGGAATTCGCCCTTGGTCTTATTGCCGGCGGCCTTGTCGACGGAAATATAG 392
Query 312 ATCTATGGAATCCTCTTTCTTTGATCGGTTCCCAGCCCAGTGAAAATGCACTCGTTGGCC 371
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 393 ATCTATGGAATCCTCTTTCTTTGATCGGTTCCCAGCCCAGCGAAAATGCACTCGTTGGCC 452
Query 372 ATCTTTCAGTTCACAAAGGCCCTGTTCGTGGTCTTGAGTTTAATGCTATCAACCCAAATC 431
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 453 ATCTTTCAGTTCACAAAGGCCCTGTTCGTGGTCTTGAGTTTAATGCTATCAGCTCAAATC 512
Query 432 TACTTGCTTCTGGGGCTGATGATGGTGAAATTTGCATTTGGGACTTATTAAAGCCTTCAG 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 513 TACTTGCTTCTGGGGCTGATGATGGTGAAATTTGCATTTGGGACTTATTAAAGCCTTCAG 572
Query 492 AGCCTTCTCATTTTCCACTTCTCAAGGGTAGTGGTTCTGCTACGCAAGGTGAAATCTCCT 551
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 573 AGCCTTCTCATTTTCCACTGCTCAAGGGTAGTGGTTCTGCTACGCAAGGTGAAATCTCCT 632
Query 552 TTATATCGTGGAATCGAAAAGTTCAACAGATATTAGCTTCTACCTCATACAATGGGACTA 611
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 633 TTATATCGTGGAATAGAAAAGTTCAACAGATATTAGCTTCTACCTCATACAATGGGACTA 692
Query 612 CTGTAATATGGGACTTGAGGAAGCAGAAGCCTATAATTAACTTTGCAGATTCAGTTCGAC 671
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 693 CTGTAATTTGGGACTTGAGGAAGCAGAAGCCTATAATTAACTTTGCAGATTCAGTTCGAC 752
Query 672 GCCGGTGCTCTGTTTTACAGTGGAACCCTAACATTACTACTCAGATAATGGTTGCATCAG 731
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 753 GCCGGTGCTCTGTTTTACAGTGGAACCCTAACGTTACTACTCAGATAATGGTTGCATCAG 812
Query 732 ATGACGACAGTTCACCTACTTTGAAGCTCTGGGACATGAGGAATATATTGTCACCTGTGC 791
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 813 ATGACGACAGTTCACCTACTTTGAAGCTCTGGGACATGAGGAATATAATGTCACCTGTGC 872
Query 792 GCGAGTTTACTGGACACCAAAGAGGGGTGATTGCAATGGAGTGGTGTCCAAGTGACAGCT 851
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 873 GCGAGTTTACTGGACACCAAAGAGGGGTAATTGCAATGGAGTGGTGCCCAAGTGACAGCT 932
Query 852 CATATCTTCTTACTTGTGCTAAGGACAACCGAACGATTTGCTGGGACACAAATACAGCAG 911
|||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 933 CATATCTTCTCACCTGTGCTAAGGACAACCGAACGATTTGCTGGGATACAAATACAGCAG 992
Query 912 AGATTGTGGCTGAGTTACCTGCTGGCAACAATTGGAATTTTGATGTTCATTGGTACCCAA 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 993 AGATTGTGGCTGAGTTACCTGCTGGCAACAATTGGAATTTTGATGTTCATTGGTACCCAA 1052
Query 972 AGATACCTGGAGTTATATCAGCATCATCATTTGATGGGAAAATTGGCATCTACAACATCG 1031
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1053 AGATACCTGGAGTTATATCAGCATCTTCATTTGATGGGAAAATTGGCATCTACAATATCG 1112
Query 1032 AGGGTTGCAGTCGATATGGTGCTGAAGAGAATAATTTTGGTACTGCTCCTTTAAGAGCAC 1091
||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1113 AGGGTTGCAGTCGCTATGGTGTTGAAGAGAATAATTTTGGTACTGCTCCTTTAAAAGCAC 1172
Query 1092 CAAAATGGTATAAGCGCCCGGTTGGTGCATCTTTTGGATTTGGGGGAAAGCTTGTATCGT 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 CAAAATGGTATAAGCGCCCGGTTGGTGCATCTTTTGGATTTGGGGGAAAGCTTGTATCGT 1232
Query 1152 GTCACACAAGGGCCCCTGCAAAGGGTACTTCGAGCATTCTATCCGAGGtttttttGCACA 1211
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1233 GTCACGCAAGGGCCCCTGCAAAGGGTACTTCGAGCATTCTATCCGAGGTTTTTTTGCACA 1292
Query 1212 GCCTGGTAACAGAACAGAGTTTGGTGAGTCGAACTTCGGAATTTGAAGCTGCAATAGAAA 1271
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1293 GCCTGGTAACAGAACAGAGTTTGGTGAGTCGAACTTCTGAATTTGAAGCTGCAATAGAAA 1352
Query 1272 ATGGAGATATGACTTCTCTAAGGGGTTTGTGCGAGAAGAAATCGGAAGAGACTGAATCCG 1331
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1353 ATGGAGATATGACTTCTCTAAGGGGTTTGTGCGAGAAGAAATCTGAAGAGACTGAATCCG 1412
Query 1332 AAGAGGAGAAAGAGACATGGGGCTTACTGAAAATCATGTTCGAAGAGGAAGGAACTTCAA 1391
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1413 AAGAGGAGAAAGAGACATGGGGCTTGCTGAAAATCATGTTCGAAGAGGAAGGAACTTCAA 1472
Query 1392 GGACAAAGTTGATCAGCCATCTTGGCTTTACTTTGCCTATTGCGGAAAATGATCAGGCAG 1451
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1473 GGACAAAGTTGATCAGCCATCTTGGCTTTACTTTGCCTGTTGCGGAAAAGGATCAGGCAG 1532
Query 1452 TAAATGGGCTCTCATCAGATCTGAATGGCAATAGATTAGAGGATACTGCGGCGGATGCAA 1511
|| ||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||
Sbjct 1533 TAGATGGGCTCTCATCAGATCTCAATGGCATTAGATTAGAGGATACTGCGGCAGATGCAC 1592
Query 1512 TGGAACCTGACGACAGTAACGAGGCAGCTGCATTTGCTATGGATAATGGAGAAGACTTCT 1571
|||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1593 TGGATCTTGACGACAGTAACGAGGCAGCTGCATTTGCGATGGATAATGGAGAAGACTTCT 1652
Query 1572 TTAACAACTTTCCTGCTAAACCGGATACACCTGTATCTACGTCTGCCAAAGATTTTATGC 1631
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1653 TTAACAACTTTCCTGCTAAACCGGATACACCTGTATCTACATCTGCCAAAGATTTTATGC 1712
Query 1632 CTTCTGACACAGATTTTTCTACCAAAGGAGAAGAAACTCAAGAAATGCAAGAAGAAGAGG 1691
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1713 CTTCTGACACAGATTTTTCTACCAAAGGAGAAGAAACGCAAGAAATGCAAGAAGAAGAGG 1772
Query 1692 AAGAAAGTTCTGACCCAGTATTTGATAATGCCATCCAGCGTGCTTTGATTGTTGGAGATT 1751
||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct 1773 AAGAAAGTTCTGACCCAGTTTTTGATAATGCCATCCAGCGAGCGTTGATTGTTGGAGATT 1832
Query 1752 ACAAGGAGGCGGTGGATCAGTGTATATCTGCAAATAAGATGGCCGATGCTTTAGTTATTG 1811
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1833 ACAAGGAGGCGGTGGATCAGTGTATAACTGCAAATAAGATGGCCGATGCTTTAGTTATTG 1892
Query 1812 CTCATGTTGGTGGTACAGCGTTGTGGGAGAGTACTCGTGAGAAATATTTGAAGACGAGCA 1871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1893 CTCATGTTGGTGGTACAGCGTTGTGGGAGAGTACTCGTGAGAAATATTTGAAGACGAGCA 1952
Query 1872 GTGCGCCTTACATGAAGGTTGTTTCTGCGATGGTGAACAATGATCTCAGGAGCCTTATCT 1931
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1953 GTGCGCCATACATGAAGGTTGTTTCTGCGATGGTGAACAATGATCTCAGGAGCCTTATCT 2012
Query 1932 ATACAAGGTCACATAAGTTCTGGAAAGAGACTCTTGCTCTCCTCTGTACTTTTGCACAAG 1991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2013 ATACAAGGTCACATAAGTTCTGGAAAGAGACTCTTGCTCTCCTCTGTACTTTTGCACAAG 2072
Query 1992 GAGAACAATGGACCACCCTGTGCGATGCCCTTGCCTCGAAGTTGATGGCTGCTGGTAACA 2051
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2073 GAGAACAATGGACAACCCTGTGTGATGCCCTTGCCTCGAAGTTGATGGCTGCTGGTAACA 2132
Query 2052 CTTTGGCTGCAGTTCTCTGCTACATTTGCGCAGGCAATGTTGACAGAACAGTAGAAATTT 2111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2133 CTTTGGCTGCAGTTCTCTGCTACATTTGCGCAGGCAATGTTGACAGAACAGTAGAAATTT 2192
Query 2112 GGTCGAGGAGCCTTGCAAATGAGCGGGATGGAAGATCTTATGCTGAGCTTCTTCAAGATC 2171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2193 GGTCGAGGAGCCTTGCAAATGAGCGGGATGGAAGATCTTATGCTGAGCTTCTTCAAGATC 2252
Query 2172 TTATGGAGAAGACTCTTGTCCTTGCTTTGGCAACTGGCAACAAAAAGTTCAGCGCATCTC 2231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2253 TTATGGAGAAGACTCTTGTCCTTGCTTTGGCAACTGGCAACAAAAAGTTCAGCGCATCTC 2312
Query 2232 TGTGTAAACTCTTTGAGAGTTATGCTGAGATACTGGCCAGCCAAGGGCTTCTTACAACGG 2291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2313 TGTGTAAACTCTTTGAGAGTTATGCTGAGATACTGGCCAGCCAAGGGCTTCTTACAACGG 2372
Query 2292 CAATGAAGTACTTGAAAGTTCTGGATTCTGGTGGCTTGTCGCCTGAACTTTCAATATTAC 2351
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2373 CAATGAAGTACTTGAAAGTTCTGGATTCTGGTGGCTTGTCACCTGAACTTTCAATATTAC 2432
Query 2352 GTGATCGTATTTCTCTGTCTGCAGAACCTGAGACTAACACTGCAGCTTCAGGAAACACTC 2411
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2433 GTGATCGTATTTCTCTATCTGCAGAACCTGAGACTAACACTACAGCTTCAGGAAACACTC 2492
Query 2412 AGCCTCAAAGCACCATGCCATATAATCAGGAGCCAACTCAGGCGCAACCAAACGTTCTTG 2471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2493 AGCCTCAAAGCACCATGCCATATAATCAGGAGCCAACTCAGGCGCAACCAAACGTTCTTG 2552
Query 2472 CTAACCCATATGATAATCAGTATCAGCAACCATACACTGATTCTTATTATGTCCCTCAAG 2531
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2553 CTAACCCATATGATAATCAGTATCAGCAACCGTACACTGATTCTTATTATGTCCCTCAAG 2612
Query 2532 CTTCACATCCACCCATGCAGCAACCAACCATGTTTATGCCTCACCAAGCTCAGCCAGCTC 2591
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2613 TTTCACATCCACCCATGCAGCAACCAACCATGTTTATGCCACACCAAGCTCAGCCAGCTC 2672
Query 2592 CGCAGCCATCTTTCACTCCAGCTCCTGCAAGCAATGCTCAGCCAACCATGAGGACTACAT 2651
||||||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||||
Sbjct 2673 CGCAGCCATCTTTTACTCCAGCTCCTACAAGCAATGCTCAGCCATCCATGAGAACTACAT 2732
Query 2652 TTGTTCCTTCAACTCCCCCTGCACTGAAGAATGCAGACCAATATCAGCAGCCAACCATGA 2711
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2733 TTGTTCCTTCAACTCCCCCTGCACTGAAGAATGCAGATCAATATCAGCAGCCAACCATGA 2792
Query 2712 GTTCTCATTCATTCACGGGACCATCTAACAATGCATACCCTGTTCGCCCGGGTCCTGGTA 2771
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2793 GTTCTCATTCATTCACGGGACCATCTAACAATGCATACCCTGTTCCCCCGGGTCCTGGT- 2851
Query 2772 CA-TATGCACCTTCTGGCCCTTCACAAGTTGGGCAATATCCTAACCCTAAGATGCCCCAA 2830
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2852 CAATATGCACCTTCTGGCCCTTCACAACTTGGGCAATATCCTAACCCTAAGATGCCCCAA 2911
Query 2831 GTTGTGGCTCCATCAGCTGGACCCATAGGATTTACGCCCATGGCAACTCCAGGAGTTGCT 2890
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2912 GTTGTTGCTCCAGCAGCTGGACCCATAGGATTTACGCCCATGGCAACTCCAGGAGTTGCT 2971
Query 2891 CCAAGATCTGGGCAACCAGCTAGTCCTCCAACACAGCAGGCAGCTGCGCAGGCAGCCCCT 2950
|||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 2972 CCAAGATCTGTGCAACCAGCAAGTCCTCCAACACAGCAGGCAGCTGCACAGGCAGCCCCT 3031
Query 2951 ACGCCTGCAACTCCGCCACCAACTGTTCAGACTGCAGATACTTCCAACGTTCCAGCCCAC 3010
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3032 GCGCCTGCAACTCCGCCACCAACTGTTCAGACTGCAGATACTTCCAACGTTCCAGCCCAC 3091
Query 3011 CAGAAACCTGTGATAGCAACGTTGACAAGGCTTTTTAACGAGACATCGGAAGCACTGGGA 3070
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 3092 CAGAAACCTGTGATAGCAACGTTGACAAGGCTTTTCAATGAGACATCGGAAGCACTGGGA 3151
Query 3071 GGCGCACGTGCAAATCCTACTAAGAAGCGTGAGATAGAAGACAACTCGAGAAAATTAGGT 3130
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3152 GGCGCACGTGCGAATACTACTAAGAAGCGTGAGATAGAAGACAACTCGAGAAAATTAGGT 3211
Query 3131 GCTCTGTTTGTGAAACTCAACAGCGGAGACATCTCCAAGAATGCTGCGGACAAACTCGCA 3190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3212 GCTCTGTTTGTGAAACTCAACAGCGGAGACATCTCCAAGAATGCTGCGGACAAACTCGCA 3271
Query 3191 CAGCTGTGTCAAGCTCTGGACAACAATGACTACAGCGCAGCCCTTCAAATACAGGTACTT 3250
||||| || |||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 3272 CAGCTATGCCAAGCTCTGGACAACAATGACTTCAGCACAGCCCTTCAAATACAGGTACTT 3331
Query 3251 CTGACGACCAACGAATGGGACGAATGCAACTTCTGGCTGGCAACACTAAAGCGGATGATG 3310
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3332 CTGACTACCAGCGAATGGGACGAATGCAACTTCTGGCTGGCAACACTAAAGCGGATGATG 3391
Query 3311 GTCAAGGCGAGGCAAAGTGTGCGATGATTATTTATTTTCTGGGTTCAT 3358
|||||||| ||||||| |||||| ||||||||||||||||||||||||
Sbjct 3392 GTCAAGGCCAGGCAAAATGTGCGGTGATTATTTATTTTCTGGGTTCAT 3439
> AT1G18830.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:6489309-6494218 FORWARD LENGTH=2910
Length=2910
Score = 712 bits (385), Expect = 0.0
Identities = 632/751 (84%), Gaps = 17/751 (2%)
Strand=Plus/Plus
Query 1680 AAGAAGAAGAGGAAGAAAGTTCTGACCCAGTATTTGATAATGCCATCCAGCGTGCTTTGA 1739
||| |||||| ||||| || ||||| ||| ||||||| |||||||||| ||| | ||||
Sbjct 1463 AAGGAGAAGAAGAAGAGAGCTCTGATCCAACATTTGATGATGCCATCCAACGTTCATTGA 1522
Query 1740 TTGTTGGAGATTACAAGGAGGCGGTGGATCAGTGTATATCTGCAAATAAGATGGCCGATG 1799
|||| |||||||||||||| || |||| ||||||| | ||||||||||||||||| ||||
Sbjct 1523 TTGTGGGAGATTACAAGGAAGCAGTGGCTCAGTGTTTTTCTGCAAATAAGATGGCTGATG 1582
Query 1800 CTTTAGTTATTGCTCATGTTGGTGGTACAGCGTTGTGGGAGAGTACTCGTGAGAAATATT 1859
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 1583 CTTTAGTTATTGCTCATGTTGGTGGTACAGAATTGTGGGAGAGTACTCGTGATAAATATA 1642
Query 1860 TGAAG-ACGAGCAGTGCGCCTTACATGAAGGTTGTTTCTGCGATGGTGAACAATGATCTC 1918
| ||| | ||||| ||| ||||||||||||||||||||||| ||| |||||||||||||
Sbjct 1643 T-AAGGATGAGCAATGCTCCTTACATGAAGGTTGTTTCTGCAATGATGAACAATGATCTA 1701
Query 1919 AGGAGCCTTATCT--ATACAAGGTCA-CATAAGTTCTGGAAAGAGACTCTTGCTCTCCTC 1975
| || ||| | || ||||||| || | ||| | ||||||||| |||||||||||| ||
Sbjct 1702 ATGA-CCT-ACCTTCATACAAGA-CAACCTAAATCCTGGAAAGAAACTCTTGCTCTCATC 1758
Query 1976 TGTACTTTTGCACAAGGAGAACAATGGACCACCCTGTGCGATGCCCTTGCCTCGAAGTTG 2035
|| ||||||||| ||||||| |||||| | ||| |||||||| |||||||| || |||
Sbjct 1759 TGCACTTTTGCAGAAGGAGATGAATGGATAAGCCTCTGCGATGCTCTTGCCTCAAATTTG 1818
Query 2036 ATGGCTGCTGGTAACACTTTGGCTGCAGTTCTCTGCTACATTTGCGCAGGCAATGTTGAC 2095
|||||||||||| |||||||||||| ||| || |||||||||||||||||||| |||
Sbjct 1819 ATGGCTGCTGGTTTTACTTTGGCTGCAACTCTGTGTTACATTTGCGCAGGCAATGTCGAC 1878
Query 2096 AGAACAGTAGAAATTTGGTCGAGGAGCCTTGCAAATGAGCGGGATGG-AAGATCTTATGC 2154
| ||||||||| |||||||| | |||||||| ||| | | | ||| || |||||||||
Sbjct 1879 AAAACAGTAGACATTTGGTCAATGAGCCTTGAAAAACAAAGTGCTGGGAA-ATCTTATGC 1937
Query 2155 TGAGCT-TCTTCAAGATCTTATGGAGAAGACTCTTGTCCTTGCTTTGGCAACTGGCAACA 2213
|||| | | ||||||||||||||||||| |||||||||||||||||| ||||| ||||||
Sbjct 1938 TGAG-TGTGTTCAAGATCTTATGGAGAAAACTCTTGTCCTTGCTTTGACAACTTGCAACA 1996
Query 2214 AAA-AGTTCAGCGCATCTCTGTGTAAACTCTTTGAGAGTTATGCTGAGATACTGGCCAGC 2272
| | ||| ||| || ||||| ||||||||||||| ||||||||||||||| |||| ||
Sbjct 1997 AGAGAGT-CAGTGCGTCTCTACGTAAACTCTTTGAAAGTTATGCTGAGATATTGGCTAGT 2055
Query 2273 CAAGGGCTTCTTACAACGGCAATGAAGTACTTGAAAGTTCTGGATTCTGGTGGCTTGTCG 2332
||||| ||| || |||| || ||||||| ||| ||| ||||||| ||||||| || ||
Sbjct 2056 CAAGGACTTATTGCAACAGCTATGAAGTTCTTAAAACTTCTGGAGTCTGGTGATTTCTCA 2115
Query 2333 CCTGAACTTTCAATATTACGTGATCGTATTTCTCTGTCTGCAGAACCTGA-GA--CTAAC 2389
|||||||||||||| || |||||||| |||||||||| |||||||||||| | |||||
Sbjct 2116 CCTGAACTTTCAATCTTGCGTGATCGGATTTCTCTGTATGCAGAACCTGAAGCTGCTAAC 2175
Query 2390 ACTGCAGCTTCAGGAAACACTCAGCCTCAAA 2420
||| | |||||| ||||||||||||| |||
Sbjct 2176 ACTTCTGCTTCAACAAACACTCAGCCTAAAA 2206
Score = 704 bits (381), Expect = 0.0
Identities = 1125/1467 (77%), Gaps = 119/1467 (8%)
Strand=Plus/Plus
Query 23 ATGGCTTGCATCAAGGGGGTGGGCAGATCCGCCTCCGTTGCCCTGGCTCCCGACGCTCC- 81
|||| |||||| ||| | | || |||||||| | ||||||| | || || || ||||
Sbjct 1 ATGGATTGCATAAAGAGTATTGGTAGATCCGCTTTCGTTGCCATCGCGCCGGAATCTCCG 60
Query 82 TTACATGGCCGCCGGAACCATGGCCGGAGCCGTCGATCTCTCCTTTAGCTCTTCCGCCAA 141
|| ||| || |||||||| ||||||||||| || ||||| || ||||| || ||||||||
Sbjct 61 TT-CATAGCAGCCGGAACAATGGCCGGAGCAGTAGATCTTTCGTTTAGTTCATCCGCCAA 119
Query 142 TCTCGAGATCTTT-AAGCTCGACTTTCAGTCTGACGATCGCGATTTGCCTCTCGTTGGGG 200
||||||||||||| || ||||| |||||||| ||||||| || | || || ||
Sbjct 120 TCTCGAGATCTTTGAA-CTCGATTTTCAGTCCAACGATCGTGAGCTAAAACTAGTAGGTC 178
Query 201 AAAGCCCCAGCTCCGAGCGCTTCCATAGACTCGCCTGGGGAAGAAACGGATCTGGATCCG 260
|| ||| || |||||||| || || ||||||| |||||||| | || |||||||||
Sbjct 179 AATGCCAAAGTTCCGAGCGGTTTAATCGACTCGCTTGGGGAAGTTATGGCTCTGGATCC- 237
Query 261 AGGAATTCTCCCTCGGTCTTATTGCCGGCGGCCTTGTCGACGGAAATATAGATCTATGGA 320
| | | ||||| || ||||| || || || ||||| || || | | ||||||
Sbjct 238 --G-A-------T-GGTCTCATAGCCGGTGGTCTAGTTGACGGGAACATCGGTTTATGGA 286
Query 321 ATCCTCTTTCTTTGATCGGTTCCCAGCCCAGTGAAAATGCACTCGTTGGCCATCTT-TCA 379
|| | | || | |||| || | |||||| ||| | |||| | || || |||
Sbjct 287 AT-C-C---AATT-A---GTTCTGAGTCTGGTGAAATTGCGCACGTTAGAGAT-TTGTCA 336
Query 380 GTTCACAAAGGCCCTGTTCGTGGTCTTGAGTTTAATGCTATCAA--C-CCAAATCTACTT 436
|||||||| ||||||||||||||||| ||||||| | | || | ||||||| ||||
Sbjct 337 AAACACAAAGGACCTGTTCGTGGTCTTGAATTTAATG-T-T-AAGTCTCCAAATCAACTT 393
Query 437 GCTTCTGGGGCTGATGATGGTGA-AATTTGCATTTGGGACTTATTAAAGCCTTCAGAGCC 495
||||||||||||||||||||| | | |||| |||||||| ||| ||| |||||| ||||
Sbjct 394 GCTTCTGGGGCTGATGATGGT-ACAGTTTGTATTTGGGATTTAGCAAATCCTTCAAAGCC 452
Query 496 TTCTCATTTTCCACTTCTCAAGGGTAGTGGTTCTGCTACGCAAGGTGAAATCTCCTT-TA 554
|||||| || | ||| ||||||| ||||||| || |||| ||||||||| ||| |
Sbjct 453 TTCTCA--TT--A--TCTAAAGGGTACTGGTTCTTATATGCAAAGTGAAATCT-CTTCTT 505
Query 555 TATCGTGGAATCGAAA-AG-TTCAACA-GATATTAGCTTCTACCTCATACAATGGGACTA 611
|||| |||||| ||| | ||||||| | | ||||| ||||||||| |||| |||||||
Sbjct 506 TATCATGGAAT--AAAGGGTTTCAACATG-TTTTAGCATCTACCTCACACAACGGGACTA 562
Query 612 CTGTAATATGGGACT-TGAGGAAGC-AGAAGCCTATAATTA-ACTTTGCAGA-TTCAGTT 667
| || |||||||| | ||| || | ||||| ||||| | || ||| | | | | |||
Sbjct 563 CAGTGATATGGGA-TGTGAATAA-CGAGAAGATTATAA-CAGAC-TTGAAAACTACCGTT 618
Query 668 CGACGCCGGTGCTCTGTTTTACAGTGGAACCCT-AACATTACTACTCAGATAATGGTTGC 726
| ||||||| ||||| || ||| | ||| | |||| || |||||| |||||||
Sbjct 619 --A----GGTGCTCAGTTTTGCAATGGGATCCTGATCATT-TTAATCAGATTTTGGTTGC 671
Query 727 ATCAGATGACGACAGTTCACCTACTTTGAAGCTCTGGGACATGAGGAATATATTGTCACC 786
|||||||| || |||||||| | | ||||||| | |||||| ||| || || |||||
Sbjct 672 TTCAGATGAAGATAGTTCACCGAATGTGAAGCTTTTGGACATAAGGTATCTACAATCACC 731
Query 787 TGTGCGCGA-GTTTACTGGACACCAAAGAGGGGTGATTGCAATGGAGTGGTGTCCAAGTG 845
||| ||| | ||| ||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 732 TGTTCGC-ACATTTGTTGGTCACCAAAGAGGTGTGATTGCAATGGAGTGGTGTCCAAGTG 790
Query 846 ACAGCTCATATCTTCTTACTTGTGCTAAGGACAACCGAACGATTTGCTGGGACACAAATA 905
|||||| ||||| ||||| |||| || ||||||||||| ||||| ||| ||||||| |
Sbjct 791 ACAGCTTGTATCTACTTACCTGTGGGAAAGACAACCGAACTATTTGTTGGAACACAAAGA 850
Query 906 CAGCAGAGATTGTGGCTGAGTTACCTGCTGG-CAACAATTGGAATTTTGATGTTCATTGG 964
||| | |||||||||||||||||||| |||| ||| || |||||||||||||||||||||
Sbjct 851 CAGGAAAGATTGTGGCTGAGTTACCTACTGGTCAA-AACTGGAATTTTGATGTTCATTGG 909
Query 965 TACCCAAAGATACCTGGAGTTATATCAGCATCATCATTTGATGGGAAAATTGGCATCTAC 1024
|| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 910 TATCCAAAGATGCCTGGAGTTATATCAGCATCTTCAGTTGATGGGAAAATTGGCATCTAT 969
Query 1025 AACATCGAGGGTTGCAGTC-GATATGGTGCTGAAGAG--AATA--A-TT-TTGGT--A-C 1074
||| | |||||||| || | | |||||| | || || || | | || || | | |
Sbjct 970 AACCTTGAGGGTTGTAG-CAGCTATGGTACCGA-GAACCAACAGCACTTCTTATTCCATC 1027
Query 1075 T----G---C---TCCTTTAAGAGCACCAAAATGGTATAAGCGCCCGGTTGGTGCATCTT 1124
| | | |||||||| |||||||||||||| |||||||||| |||||||||||
Sbjct 1028 TTCTCGATGCAGATCCTTTAACAGCACCAAAATGGTGGAAGCGCCCGGCTGGTGCATCTT 1087
Query 1125 TTGGATTTGGGGGAAAGCTTGTATCGTGTCACACAAGGGCCCCTGCAAAGGGTACTTCGA 1184
|||||||||| ||||||||| | |||| | | |||| ||| | ||||
Sbjct 1088 TTGGATTTGGAGGAAAGCTTATTTCGTTT-A-ACAA----------AAA---T-CTTCCT 1131
Query 1185 GCATTCTATCCGAGGtttttttGCACAGCCTGGTAACAGAACAGAGTTTGGTGAGTCGAA 1244
| | | ||| ||||| ||| |||| ||| ||| |||||| | |||||||||| |||||
Sbjct 1132 G-AGGC-ATCTGAGGTCTTTCTGCATAGCTTGGCCACAGAAAAAAGTTTGGTGAATCGAA 1189
Query 1245 CTTCGGAATTTGAAGCTGCAATAGAAAATGGAGATATGACTTCTCTAAGGGGTTTGTGCG 1304
||| |||||||||||||| ||||||||||||| | |||||| || |||||||| ||||
Sbjct 1190 TTTCTAAATTTGAAGCTGCATTAGAAAATGGAGAGAAGACTTCCCTTAGGGGTTTATGCG 1249
Query 1305 AGAAGAAATCGGAAGAGACTGAATCCGAAGAGGAGAAAGAGACATGGGG-CTTACTGAAA 1363
|||||||| | |||||| | ||||| || || ||||| || |||||||| || ||||||
Sbjct 1250 AGAAGAAAACAGAAGAGGCCGAATCTGAGGAAGAGAAGGAAACATGGGGACTG-CTGAAA 1308
Query 1364 ATCATG-TTCGAAGAGGAAGG-AACTTCAAGGACAAAGTTGA-TCAGCCATCTTGGCTTT 1420
|| ||| || ||||| || || ||| ||| ||| |||||| | |||||||||||||||
Sbjct 1309 ATTATGCTT-GAAGAAGATGGGAACG-CAAAGACGAAGTTGCGT-AGCCATCTTGGCTTT 1365
Query 1421 ACTTTGCCTAT-TGCGGAAAATGATCA 1446
| ||| || || || ||||||||||||
Sbjct 1366 AGTTTACC-ATCTGAGGAAAATGATCA 1391
Score = 206 bits (111), Expect = 2e-51
Identities = 305/397 (77%), Gaps = 20/397 (5%)
Strand=Plus/Plus
Query 2954 CCTGCAACTCCGCCACCAACTGTTCAGACTGCAGATACTTCCAACGTTCCAGCCCACCAG 3013
|||| | |||| |||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2521 CCTGTAGCTCCACCACCAACTGTTCAGACTGCAGATACTTCCAATGTACCAGCCCACCAG 2580
Query 3014 AAACCTGT-GATAGCAACGTTGACAAGGCTTTTTAACGAGACATCGGAAGCACTGGGAGG 3072
|||||| | | | || | ||||||||||| ||||| ||||||| ||| || | ||||
Sbjct 2581 AAACCTATTG-TGGCTTCATTGACAAGGCTATTTAAAGAGACATTTGAACCATTAAGAGG 2639
Query 3073 CG---CACGTGCAAA-TCCTACTAAGAAGCGTGAGATAGAAGACAA---CTCGAGAAAAT 3125
|| | | | | |||| | |||||||||||| |||||| || ||| |||||
Sbjct 2640 TTATTCAAGAG-ATACTCCTGCCAAGAAGCGTGAGGCAGAAGATAATTGCTCAAGAAAGC 2698
Query 3126 TAGGTGCTCTGTTTGTGAAA-CTCAACAGCGGAGACATCTCCAAGAATGCTGCGGACAAA 3184
|||| ||||||||| | ||| || || | || |||||||| ||||| ||||| || |||
Sbjct 2699 TAGGAGCTCTGTTT-TCAAAACTAAATAATGGGGACATCTCGAAGAACGCTGCTGAAAAA 2757
Query 3185 CTCGCACAGCTGTGTCAAGCTCTGGACAA-CAATGACTACAGCGCAGCCCTTCAAA-TAC 3242
||| | ||||| ||||||||||||||||| | ||| | | ||||| || ||| |||
Sbjct 2758 CTCACTCAGCTCTGTCAAGCTCTGGACAAACG-TGATTTTGGTGCAGCG-TTAAAAATAC 2815
Query 3243 AGGTACTTCTGACGACCAACGAATGGGACGAATGCAACTTCT-GGCTGGCAACACTAAAG 3301
||| ||| |||| | || ||||||||| || |||| |||| |||| ||||||| |||
Sbjct 2816 AGGGGCTTATGACAAGCACCGAATGGGATGAGTGCAG-TTCTTGGCTTCCAACACTTAAG 2874
Query 3302 CGGATGATGGTCAAGGCGA-GGCAAAGTGTGCGATGA 3337
||||| |||| || || |||||| |||||| |||
Sbjct 2875 AAAATGATCGTCACGG-GAAGGCAAAATGTGCGGTGA 2910
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 167106087133
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5