BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg939541
Length=2046
Score E
Sequences producing significant alignments: (Bits) Value
AT5G01290.1 | Symbols: | mRNA capping enzyme family protein | ... 3155 0.0
AT3G09100.2 | Symbols: | mRNA capping enzyme family protein | ... 1421 0.0
> AT5G01290.1 | Symbols: | mRNA capping enzyme family protein
| chr5:117307-121569 FORWARD LENGTH=2364
Length=2364
Score = 3155 bits (1708), Expect = 0.0
Identities = 1923/2022 (95%), Gaps = 33/2022 (2%)
Strand=Plus/Plus
Query 21 CTGCAATGGACCTAAATGCTTCACCCCAACCCGAAGAAGACGAGGAATCCTTTAAGAGAC 80
|||| |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||
Sbjct 209 CTGCGATGGACCTAAATGCTTCACCACAACCCGAAGAAGACGATGAACCCTTTAAGAGAC 268
Query 81 GTCATGAAGATCGAGTTGAATCTGCTGTTGAGATCGCTAGACGGGAGCGTGAAGAACGAA 140
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 269 GTCATGAAGATCGAATGGAATCTGCTGTTGAGATCGCTAGACGGGAGCGTGAAGAACGAA 328
Query 141 AGAAACGAATGAGATATGACAGGCCAACCA-GAAG-CTCTCAGCCGGTTTTTCGTGACCA 198
||||||||||||||| ||| ||||||| || | || ||||||||||| ||||||||| ||
Sbjct 329 AGAAACGAATGAGATTTGATAGGCCAA-CACG-AGTCTCTCAGCCGGCTTTTCGTGATCA 386
Query 199 GTCTTATCAGAAGAGAGATACTAGAGTTTATGATCAAAGCAAGCTTCCTCAGGGTTGGCT 258
| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 387 G---TAT------AGAGATACTAGAGTTTATGATCAAAGCAAGCTTCCTCAGGGTTGGCT 437
Query 259 AGATTGTCCTGGTTTTGGTCTGGAGATAGGTTGTATTATTCCTTCTAAGGTTCCTCTTAG 318
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 438 AGATTGTCCTGGTTTTGGTCTGGAGATAGGATGTATTATTCCTTCTAAGGTTCCACTTAG 497
Query 319 TGAATCTTACAACGAACATGTTCCTCCTGGTAAAAGATACTCTTTTAAACAGGTGGTCCG 378
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 498 TGAATCTTACAACGAACATGTTCCTCCTGGTAAAAGATACTCTTTCAAACAGGTGGTTCG 557
Query 379 TAACCAGAGAATTAATGGAAGAAAACTTGGTCTTGTGATTGATCTAACTAATACAACTCG 438
||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 558 TAACCAGAGAATTAATGGAAGAAAACTTGGTCTAGTCATTGATCTTACTAATACAACTCG 617
Query 439 TTACTACCCTACACTT-GACTTAAAGAAGGATGGCATCAAGCATGTTAAGATTGCATGCA 497
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 618 TTACTACCCTACA-TTAGACTTAAAGAAGGATGGCATCAAGCATGTTAAGATTGCATGCA 676
Query 498 GGGGTCGTGATGCCGTGCCTGATAATGTGTCTGTAAACACCTTTGTCAACGAGGTTCTGC 557
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 677 GGGGTCGTGATGCTGTGCCTGATAATGTCTCTGTAAACACCTTTGTCAACGAGGTTCTGC 736
Query 558 AGTTCGTCCTTAATCAAAAACACGCAAAGAAGTATGTCCTCGTCCACTGTACACATGGGC 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 737 AGTTCGTCCTTAATCAAAAACACGCAAAGAAGTATGTCCTCGTCCACTGTACACATGGGC 796
Query 618 ATAATCGGACAGGTTTCATGATAGTTCATTATCTTATGCGCTCTATGCCAACGATGAACG 677
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 797 ATAATCGGACAGGGTTCATGATAGTTCATTATCTCATGCGCTCTATGCCAACGATGAACG 856
Query 678 TTACACAGGCATTGAAGTTGTTTTCTGATGCCCGCCCACCTGGGATTTATAAAGCGGATT 737
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 857 TTACACAGGCATTGAAGTTGTTTTCTGATGCCCGCCCACCTGGGATTTATAAACCAGATT 916
Query 738 ATATTGATGCTTTATACACTTTTTATCACGAAATAAAGCCTGAGAGTGTTACTTGCCCAC 797
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 917 ATATTGATGCTTTATACACTTTTTATCACGAAATAAAGCCTGAAAGTGTTACTTGCCCAC 976
Query 798 CAACTCCTCAATGGAAGAGGTCTACCGAGCTTGATCTTAATGGTGAAGCTGTTCAAgatg 857
|||||||| |||||||||||||| |||||||||||||||||||||||||||||| | | |
Sbjct 977 CAACTCCTGAATGGAAGAGGTCTGCCGAGCTTGATCTTAATGGTGAAGCTGTTC-A-A-G 1033
Query 858 atgatgatgatgatgatTCTCCGCCTGACCCTGTTCAAGAAATTAATCAGGAGACTGTGA 917
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1034 ATGATGATGATGATGATTCTCCGCCTGACCCTGTTCAAGAAATCAATCAGGAGAATGTGA 1093
Query 918 AGATGTCAAATGATGACATTTTGGGTGATGAAATACCCCATTATCAGGAGGAAGCTTACC 977
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1094 AGATGTCAAATGATGACACTTTGGGTGATGAAATACCCCATTATCAGGAGGAAGCTTACC 1153
Query 978 GGCAATTCTGTTATAAGATGCTTTATCCAGAAAACAAGAAGATGAATATTGGGGGAGGAG 1037
|||||||||||||||| |||| |||| ||||||| |||||||| |||
Sbjct 1154 GGCAATTCTGTTATAAAATGC-TTAT--------------GATGAATGTTGGGGGAAGAG 1198
Query 1038 GATGTAAGCCATTCCCAGGTTCGCACCCTGTATCATTAGACAGGGAGAGTTTGCAACTTT 1097
||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 GATTTATGCAATTCCCAGGTTCGCACCCTGTATCATTAGACAGGGAGAGTTTGCAACTTT 1258
Query 1098 TGAGACAGCGGTACTATTATGCGACATGGAAGGCAGATGGAACACGTTATATGATGCTCT 1157
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGAGGCAGCGATACTATTATGCGACATGGAAGGCAGATGGAACACGTTATATGATGCTCT 1318
Query 1158 TAACTATAGATGGGTGCTATTTGATAGATAGGAGCTTTAAGTTTCGGAGGGTACAGATGC 1217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 TAACTATAGATGGGTGCTATTTGATAGATAGGAGCTTTAAGTTTCGGAGGGTACAGATGC 1378
Query 1218 GTTTTCCCTGTAAGCACTCACGTGAGGGAATTTCTGATAAAGTGCATCACTACACTTTGC 1277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 GTTTTCCCTGTAAGCACTCACGTGAGGGAATTTCTGATAAAGTGCATCACTACACTTTGC 1438
Query 1278 TTGATGGAGAGATGGTCATAGATACCCCGACAGGTGAACAAGGGGAGGCGAGGAGGAGGT 1337
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1439 TTGATGGAGAGATGGTCATAGATACCCCGACAGGTGAGCAAGGGGAGGCAAGGAGGAGGT 1498
Query 1338 ACCTCGTATATGATATGGTAGCAATCAACGGCGAATCAGTCGTAGAGCGGACTTTCTGTG 1397
| |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||
Sbjct 1499 ATCTCGTATATGATATGGTAGCAATCAATGGTGAATCAGTTGTAGAGCGGACTTTCTGTG 1558
Query 1398 AAAGATGGAACATGTTCGTGCGTGAGGTGATCGGACCTCGAGCAGCTGAGAAGCTCAGAA 1457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 AAAGATGGAACATGTTCGTGCGTGAGGTGATCGGACCTCGAGCAGCTGAGAAGCTCAGAA 1618
Query 1458 GTCATTGCTATAGATATGACCTTGAGCCTTTTGCGGTACGGATGAAGGGTTTTTGGTTAC 1517
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1619 GTCATTGCTACAGATATGACCTTGAGCCTTTTGCGGTACGGATGAAGGGTTTCTGGTTAC 1678
Query 1518 TTTCGACTGTTGAGAAGCTTTTGAAGAATACCATTCCATCGCTTTCGCATGAAGCAGATG 1577
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 TTTCTACTGTTGAGAAGCTGTTGAAGAATACCATTCCATCGCTTTCGCATGAAGCAGATG 1738
Query 1578 GCTTAATATTTCAGGGTTGGGATGATCCTTATGTTCCACGAACCCATAAAGGTCTGTTGA 1637
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1739 GCTTAATATTTCAGGGTTGGGATGATCCGTATGTTCCACGAACCCATAAAGGTCTACTGA 1798
Query 1638 AGTGGAAGTATGCAGAAATGAACTCGGTAGACTTTCTGTTTGAGACGGGTGAGGAGGAGG 1697
||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||
Sbjct 1799 AGTGGAAGTATGCAGAAATGAACTCAGTAGACTTTCTGTATGAGATGGGTGAGGAAGAGG 1858
Query 1698 GGCGTGGTTTCCTCTTCTTGCATGAAAGAGGGAAGAAAAAGCTTATGGAAGGATATTCAG 1757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1859 GGCGTGGTTTCCTCTTCTTGCATGAAAGAGGGAAGAAAAAGCTTATGGAAGGATATTCAG 1918
Query 1758 TTGAGTTTAGAGATGATTCGGACCCGTCAAGTTACAATGGGAAGATTGTAGAGTGTGCAT 1817
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1919 TTGAGTTTAGAGATGATTCGGACCCGTCAAGTTACAATGGGAAGATTGTAGAATGTGCTT 1978
Query 1818 GGGATAAGGATAAGAAAGTTTGGTTTAGCATGCGGATCAGAGTTGACAAAACTACACCAA 1877
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1979 GGGATAAGGATAAGAAAGTTTGGTTTAGCATGAGGATCAGAGTTGACAAAACTACACCAA 2038
Query 1878 ATGATATCAACACCGCTCGTAAGGTGATAAAGAGCATAAATGATAACATCACTGAGGAGG 1937
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2039 ATGATATCAACACTGCTCGTAAGGTGATAAAGAGCATAAATGATAACATCACTGAGGAGG 2098
Query 1938 TGCTGCTTCAGGAAATAAAAGAGATCATACGTCTCCCGATGTACGCTGACCGCATTCGAA 1997
| ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||
Sbjct 2099 TTTTGCTTCAGGAAATAAGAGAGATCATTCGTCTCCCAATGTACGCTGACCGCATTCGAA 2158
Query 1998 ATGATAGTCAAGCTGCACGCCGCAAGTAGAGATTACAttttt 2039
|||||||||||||||| |||||| |||||||||||||||||
Sbjct 2159 ATGATAGTCAAGCTGCCCGCCGCCGGTAGAGATTACATTTTT 2200
> AT3G09100.2 | Symbols: | mRNA capping enzyme family protein
| chr3:2787981-2793532 REVERSE LENGTH=2781
Length=2781
Score = 1421 bits (769), Expect = 0.0
Identities = 1588/1970 (81%), Gaps = 110/1970 (6%)
Strand=Plus/Plus
Query 101 TCTGCTGTTGAGATCGCTAGACGGGAGCGTGAAGA-ACGAAAGAAACGAATGAGATATGA 159
||||||||||| |||||||||||||| |||||||| | ||||||||||||||||||||||
Sbjct 414 TCTGCTGTTGAAATCGCTAGACGGGAACGTGAAGAGA-GAAAGAAACGAATGAGATATGA 472
Query 160 CAGGCCAAC-CAGAAGCTCTCAGCCGGTTTTTCGTGACCAGTCTTATCAGAAGAGAGATA 218
|| |||||| || || ||||||||| ||||| ||||| || | ||| ||||| || |||
Sbjct 473 CAAGCCAACACATAA-CTCTCAGCCAGTTTTCCGTGATCAATATTACCAGAATCGAAATA 531
Query 219 CTAGAGTTTATGATCA-A-AGCAAGCTTCCTCAGGGTTGGCTAGATTGTCCTGGTTTTGG 276
||| || ||||||| | | | |||| | ||||| ||||||||||| || ||| || |||
Sbjct 532 CTAAAGCTTATGAT-AGATA-CAAGATCCCTCAAGGTTGGCTAGACTGCCCTCCTTCTGG 589
Query 277 TC-TGGAGATAGGTTGTATTA-TTCCTTCTAAGGTTCCTCTTAGTGAATCTTACAACGAA 334
|| ||||||| | | | ||||||| || ||||| || | |||||||||||| ||
Sbjct 590 GAATG-AGATAGGAT-TCCTCGTTCCTTCAAAAGTTCCCCTGAATGAATCTTACAAT-AA 646
Query 335 -CATGTTCCTCCTGGTAAA-AGATACTCTTTTAAACAGGTGGTCCGTAACCAGAGAATTA 392
||||| |||||||| || ||||||||||||||||||||| ||| ||||||||| || |
Sbjct 647 TCATGTACCTCCTGG-AAGTAGATACTCTTTTAAACAGGTGATCCATAACCAGAGGAT-A 704
Query 393 A-TGGAAGAAAACTTGGTCTTGTGATTGATCTAACTAATACAACTCGTTACTACCCTAC- 450
||| ||||| |||||||| ||||| ||| | || || |||||||||||||| ||||
Sbjct 705 GCTGGGAGAAAGCTTGGTCTGGTGATCGATTTGACAAACACAACTCGTTACTATTCTACG 764
Query 451 ACTTGACTTAAAGAAGGATGGCATCAAGCATGTTAAGATTGCATGCAGGGGTCGTGATGC 510
|| ||||| ||||| || ||||| |||||||| ||||||||||||| ||||||||||||
Sbjct 765 ACA-GACTTGAAGAAAGAAGGCATTAAGCATGTGAAGATTGCATGCAAGGGTCGTGATGC 823
Query 511 CGTGCCTGATAATGTGTCTGTAAACACCTTTGTCAACGAGGTTC-TGCAGTTCGTCCTTA 569
||||| |||||||||||||| ||| | |||||||| |||||| | ||||| ||||| |
Sbjct 824 AGTGCCAGATAATGTGTCTGTCAACGCATTTGTCAATGAGGTTAAT-CAGTTTGTCCTAA 882
Query 570 ATCAAAAACACGC-AAAGAAGTATGTCCTCGTCCACTGTACACATGGGCATAATCGGACA 628
||| ||||||| | ||| |||||| | |||||||| ||||||||||| ||||||||||||
Sbjct 883 ATCTAAAACACTCGAAA-AAGTATATTCTCGTCCATTGTACACATGGACATAATCGGACA 941
Query 629 GGTTTCATGATAGTTCATTATCTTATGCGCTCTATGCCAACGATGAACGTTACACAGGCA 688
|| |||||||||||||||||||| ||||| ||| ||||| |||| |||||||||||
Sbjct 942 GGGTTCATGATAGTTCATTATCTCATGCGATCTGGGCCAA---TGAATGTTACACAGGCT 998
Query 689 TTGAAGTTGTTTTCTGATGCCCGCCCACCTGGGATTTATAAAGCGGATTATATTGATGCT 748
||||| | ||||| |||||||||||||||||||| |||||| | |||||||||||||||
Sbjct 999 TTGAAAATCTTTTCCGATGCCCGCCCACCTGGGATCTATAAACCAGATTATATTGATGCT 1058
Query 749 TTATACACTTTTTATCACGAAATAAAGCCTGAGAGTGTTACTTGCCCACCAACTCCTCAA 808
|||||| | ||||||||||||||||| ||||| || || | ||||||| |||||||| ||
Sbjct 1059 TTATACTCGTTTTATCACGAAATAAAACCTGAAAGCGTCATTTGCCCATCAACTCCTGAA 1118
Query 809 TGGAAGAGGTCTACCGAGCTTGATCTTAA-TGGTGAAGCTGTT-CAAgatgatgatgatg 866
|||||||||||||| ||||||||| |||| |||||||||| || | ||||||||| ||||
Sbjct 1119 TGGAAGAGGTCTACTGAGCTTGAT-TTAAATGGTGAAGCT-TTGCCAGATGATGAAGATG 1176
Query 867 atgatgat--TC-TCC-G--CCTGACCCTG-TT-C-A--AG-AAATTAATCAGGAG-ACT 913
|||||| || | | | |||| | | || | | || ||| | |||||| | | |
Sbjct 1177 ATGATGGCGGTCCTGCTGGTCCTGTGCAAGGTTTCCAGGAGGAAAGTCATCAGGTGGA-T 1235
Query 914 GTGAAGATGTCAAATGATGACATTTTGGGTGATGAAATACCCC-ATTATCAGGAGGAAGC 972
|| |||||||||||||||||| || | |||||||||||||||| | | ||||||||||
Sbjct 1236 GTCAAGATGTCAAATGATGACGTTCTAGGTGATGAAATACCCCCAG-ACCAGGAGGAAGG 1294
Query 973 TTACCGGCAATTCTGTTATAAGATGCTTTATCCAGAAAACAAGAAGATGAATATTGGGGG 1032
|||||| ||||||| ||||| |||||| ||| | | |||||||||||||
Sbjct 1295 TTACCGCCAATTCTTTTATAGGATGCT--ATC-A-----C-------TGAATATTGGGGG 1339
Query 1033 AGGAGGATGTA-AGCCATTCCCAGGTTCGCACCCTGTATCATTAGACAGGGAGAGTTTGC 1091
| |||||||| | | ||| |||||||| |||||||| || ||| ||||||| | |||||
Sbjct 1340 AAGAGGATGTTCA-CAATTTCCAGGTTCACACCCTGTCTCCTTAAACAGGGAAAATTTGC 1398
Query 1092 AACTTTTGAGACAGCGGTACTATTATGCGACATGGAAGGCAGATGGAACACGTTATATGA 1151
|||| ||||| ||||||||||||||||| |||||||| || |||||||| || |||||||
Sbjct 1399 AACTCTTGAGGCAGCGGTACTATTATGCAACATGGAAAGCTGATGGAACGCGATATATGA 1458
Query 1152 TGCT-CTTAACTATAGATGGGTGCTATTT-GATAGATAGGAGCTTTAAGTTTC-GGAGGG 1208
|||| || ||| | ||||| || || | | ||||||| ||||||| | ||| ||||||
Sbjct 1459 TGCTGCT-AACCACCGATGGATGTTACATAG-TAGATAGAAGCTTTA-GATTCCGGAGGG 1515
Query 1209 TACAGATGCGTTTTCCCTGTAAGCACTCA-CGTGAGGGAATTTCTGATAAAGTGCATCAC 1267
|||||||||| || |||| || |||| || | ||| || || |||||||||||||| ||
Sbjct 1516 TACAGATGCGGTTCCCCTTTAGGCACCCAAC-TGAAGGCATATCTGATAAAGTGCACCAT 1574
Query 1268 TACACTTTGCTTGATGGAGAGATGGTCATAGATACCCCGACAGGTGAACAAGGGGAGGCG 1327
| ||| || ||||||||||| ||| | || |||||| | ||| | ||||| | ||| |
Sbjct 1575 TTCACATTACTTGATGGAGAAATGATAATCGATACCTTGCCAGATAAACAAAAGCAGGAG 1634
Query 1328 AGGAGGAGGTACCTCGTATATGATATGGTAGCAATCAACGGCGAATCAGTCGTAGAGCGG 1387
||||| | ||||| | ||||| |||||||||||||||||| ||||||| |||||| ||
Sbjct 1635 AGGAG-A--TACCTAATCTATGACATGGTAGCAATCAACGGCCAATCAGTTGTAGAGAGG 1691
Query 1388 ACTTTCTGTGAAAGATGGAACATGTTCGTGC-GTGAGGTGATCGGACCTC-G-AG-CAGC 1443
|||||| |||||||||||| ||| ||| | | |||||||| | ||| | | | ||
Sbjct 1692 CCTTTCTATGAAAGATGGAAGATGCTCGAGAAG-GAGGTGATAG-ACCCCCGTAATCA-- 1747
Query 1444 TGAGAAGCTCA-GAAGTCAT-TGCTATAGATATGACCTTGAGCCTTTT-GCGGTACGGAT 1500
||||||| || |||||||| | |||||||||||| |||||||||||| | ||| ||||
Sbjct 1748 TGAGAAGG-CAAGAAGTCATAT-CTATAGATATGATCTTGAGCCTTTTAG-GGTGCGGA- 1803
Query 1501 GAAGGGTTTT-TGGTTACTTTC-GACTGTTGAGAAGCTTTTGAAGAATACCATTCCATCG 1558
||| || ||| ||||| ||||| | | ||||||||| |||||||| | ||| |||||
Sbjct 1804 GAAAGGATTTCTGGTTGCTTTCTG-CGGTTGAGAAGGTTTTGAAGGGTTTCATACCATCA 1862
Query 1559 CTTTCGCATGAAGCAGATGGCTTAATATTTCAGGGTTGGGATGATCCTTATGTTCCACGA 1618
||||| |||||||| || ||| |||| |||||||| |||||||||||||||||||| ||
Sbjct 1863 CTTTCACATGAAGCCGACGGCCTAATCTTTCAGGGCTGGGATGATCCTTATGTTCCCCGC 1922
Query 1619 ACCCATAAAGGTCTGTTGAAGTGGAAGTATGCAGAAATGAACTCGGTAGACTTTCTGTTT 1678
|||||| ||||||||||||| ||||||||| |||| ||||||||||| |||||||| |
Sbjct 1923 ACCCATGAAGGTCTGTTGAAATGGAAGTATCCAGAGATGAACTCGGTTGACTTTCTATAC 1982
Query 1679 GAGACGGGTGAGGAGGAGGGGC-GTGGTTTCCTCTTCTTGCATGAAAGAGGGAAGAAAAA 1737
||| | || | ||| || ||| |||| | |||| |||| ||||||||||||||||||
Sbjct 1983 GAG-CAGG--ATGAG-AGTGGCCGTGGAATGCTCTCCTTGTTTGAAAGAGGGAAGAAAAA 2038
Query 1738 GCTTATGGAAGGATATTCAGTTGAGTTTAGAGATGATTCGGACCC-G-TCAAGTTACAAT 1795
|| |||||| ||| |||| |||| |||||||||||||| ||||| | | | || || |
Sbjct 2039 GCATATGGATGGAAATTCTGTTGTTTTTAGAGATGATTCAGACCCTGCTGA-GT-ACTCT 2096
Query 1796 GGGAAGATTGTAGAGTGTGCATGGGATAAGGATAAGAAAGTTTGGTTTAGCATGCGGATC 1855
|||||||||||||||||| | |||||| ||||| ||||||| ||| | ||||||||| ||
Sbjct 2097 GGGAAGATTGTAGAGTGTTCTTGGGATCAGGATGAGAAAGTCTGGGTAAGCATGCGGGTC 2156
Query 1856 AGAGTTGACAAAACTACACCAAATGATATCAACACCGCTC-GTAAGGTGATAAAGA-GCA 1913
|| || || ||| | || ||||||||||||||||| || | |||||||| | || |||
Sbjct 2157 AGGGTCGATAAATCAACGCCAAATGATATCAACACTT-TCAGAAAGGTGATGA-GAAGCA 2214
Query 1914 TAAATGATAACATCACTGAGGAGGTGCTGCTTCAGGAAATAAAAGAGATCATACGTCTCC 1973
|||| || |||||||| ||||| ||||| || ||||| |||| |||||||| ||| | |
Sbjct 2215 TAAAGGACAACATCACAGAGGAAGTGCTACTGCAGGAGATAAGGGAGATCATCCGTTTGC 2274
Query 1974 CGATGTACGCTGACCGCATTCGAAATG-ATAGTCAA-GCTGCACGCCGCA 2021
| ||||| || || || |||| ||||| |||| ||| ||||| |||||||
Sbjct 2275 CTATGTATGCGGATCGTATTC-AAATGGATAG-CAAAGCTGCGCGCCGCA 2322
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101405100900
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5