BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg939617 Length=389 Score E Sequences producing significant alignments: (Bits) Value AT5G02420.1 | Symbols: | unknown protein; Has 90 Blast hits to... 643 0.0 > AT5G02420.1 | Symbols: | unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:523389-524076 FORWARD LENGTH=688 Length=688 Score = 643 bits (348), Expect = 0.0 Identities = 378/392 (96%), Gaps = 3/392 (1%) Strand=Plus/Plus Query 1 TCTCTCTCTAAAACTTGTCTAATGGCAGAGATCTGCTGCGTCAAAGAGATCCAAGAAGAA 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 92 TCTCTCTGTAAAACTTGTCTAATGGCAGAGATCTGCTGCGTCAAAGAGATCCAAGAAGAA 151 Query 61 GACGTAGAGAAGATCCGATTACCGACCCGACCCGAATTAGACATCCCTGACCCTGATCAC 120 ||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 152 GACGTGGAGAAGATCCGATTACCGACCCGACCCGAATTAGACATTCCTGACTCTGATCAC 211 Query 121 GAAGATCCAACGGTCAACGAAGAAGATGGGTGCAAGACTCCAACATCGTCCGATCACAAG 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 212 GAAGATCCAACGGTCAACGAAGAAGAAGGGTGCAAGACTCCAACATCGTCCGATCACAAG 271 Query 181 ATTCCGGAGGTGAAGTATACGTTATGTCCACCGGCTCCGAGAAAACCGAAACCGAACCGG 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 272 ATTCCGGAGGTGAAGTATACGTTATGTCCACCGGCTCCGAGAAAACCAAAACCGAATCGA 331 Query 241 TCTTCCGGTACGAAACGGAAATTAACGCCGGTTAATGTTGTTAACCGTATACCGATTGAT 300 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 332 TCTTCCGGTACGAAACGGAAATTAACGCCGGTTAATGTTGTTAACCGCATACCGATTGAT 391 Query 301 CTGAGCCGTGAGATCGAGATGTTCTTCGAGGATTTGGACCGTAGGATCAAGAAGTCCCGG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 392 CTGAGCCGTGAGATCGAGATGTTCTTCGAGGATTTGGACCGTAGGATCAAGAAGTCACGG 451 Query 361 AAACAATAAGA---TTATTGCTTTAATTGGTA 389 ||||||||||| ||||||| |||||||||| Sbjct 452 AAACAATAAGAAGATTATTGCCTTAATTGGTA 483 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18347728385 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5