BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg939709
Length=1105
Score E
Sequences producing significant alignments: (Bits) Value
AT5G03300.1 | Symbols: ADK2 | adenosine kinase 2 | chr5:796442-... 1892 0.0
AT3G09820.1 | Symbols: ADK1, ATADK1 | adenosine kinase 1 | chr3... 1267 0.0
> AT5G03300.1 | Symbols: ADK2 | adenosine kinase 2 | chr5:796442-799176
FORWARD LENGTH=1348
Length=1348
Score = 1892 bits (1024), Expect = 0.0
Identities = 1068/1090 (98%), Gaps = 0/1090 (0%)
Strand=Plus/Plus
Query 16 TCATCATCATGGCTTCTTCTTCTAACTACGATGGAATCCTTCTCGGAATGGGTAACCCAC 75
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 124 TCATCATCATGGCTTCTTCTTCTAACTACGATGGAATCCTTCTCGGTATGGGTAACCCAC 183
Query 76 TCCTCGATATCTCTGCCGTCGTCGACGACGAATTTCTCACCAAATACGACATCAAGTTGA 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 TCCTCGATATCTCTGCCGTCGTCGACGACGAATTTCTCACCAAATACGACATCAAGTTGA 243
Query 136 ACAATGCGATTCTCGCTGAGGACAAACATTTGCCCATGTATGATGAGATGAGTAGCAAGT 195
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 244 ACAATGCGATTCTCGCGGAAGACAAACATTTGCCCATGTATGATGAGATGAGTAGCAAGT 303
Query 196 TCAATGTTGAATACATTGCCGGAGGTGCTACTCAGAACTCAATCAAAGTGGCTCAGTGGA 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 TCAATGTTGAATACATTGCCGGAGGTGCTACTCAGAACTCAATCAAAGTGGCTCAGTGGA 363
Query 256 TGCTTCAAATTCCTGGGGCAACCAGTTACATGGGATCCATTGGAAAGGACAAATATGGAG 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 TGCTTCAAATTCCTGGGGCAACCAGTTACATGGGATCCATTGGAAAGGACAAATATGGAG 423
Query 316 AGGCCATGAAGAAGGATGCTACAGCAGCTGGTGTCAATGTTCACTATTATGAAGATGAGT 375
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 424 AGGCCATGAAGAAGGATGCTACAGCAGCTGGTGTTAATGTTCACTATTATGAAGATGAGT 483
Query 376 CGGCACCTACTGGAACTTGCGGTGTCTGTGTTGTTGGTGGAGAAAGGTCTCTTATTGCGA 435
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 484 CGGCACCTACTGGAACTTGTGGTGTCTGTGTTGTTGGTGGAGAAAGGTCTCTTATTGCGA 543
Query 436 ATCTTTCAGCTGCAAACTGCTACAAGGTTGATCACCTTAAGAAGCCTGAAAACTGGGCAT 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 544 ATCTTTCAGCTGCAAACTGCTACAAGGTTGATCACCTTAAGAAGCCTGAAAACTGGGCAT 603
Query 496 TGGTTGAGAAGGCCAAGTTCTATTACATTGCTGGATTCTTCCTCACAGTATCGCCTGAAT 555
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 604 TGGTTGAGAAGGCCAAGTTCTACTACATTGCTGGATTCTTCCTCACAGTATCGCCTGAAT 663
Query 556 CCATTCAGTTGGTATCTGAGCATGCTGCTGCAAACAACAAGGTGTTCACAATGAACCTTT 615
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 664 CCATTCAGTTGGTATCTGAGCACGCTGCTGCAAACAACAAGGTGTTCACAATGAACCTTT 723
Query 616 CTGCTCCATTCATTTGTGAATTCTTCAAAGATGTGCAGGAGAAGTTCTTGCCATACATGG 675
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 724 CTGCTCCATTCATCTGTGAATTCTTCAAAGATGTGCAGGAGAAGTTCTTGCCATACATGG 783
Query 676 ACTTCGTTTTCGGCAATGAAACAGAAGCAAGAACCTTCTCCAGGGTTCACGGCTGGGAGA 735
||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||
Sbjct 784 ACTTCGTTTTCGGCAATGAGACAGAGGCAAGAACCTTCTCTAGGGTTCATGGCTGGGAGA 843
Query 736 CTGAAGATGTCGAACAAATAGCCATCAAGATTTCACAGCTTCCCAAGGCCACGGGAACAT 795
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 844 CTGAAGATGTCGAACAAATAGCCATCAAGATTTCACAGCTTCCCAAGGCCACAGGAACAT 903
Query 796 ACAAGAGGACCACTGTGATAACACAGGGCGCAGATCCAGTGGTTGTTGCTGAAGATGGAA 855
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 904 ACAAGAGGACCACTGTGATTACACAGGGCGCTGATCCAGTGGTTGTTGCTGAAGATGGAA 963
Query 856 AGGTGAAGAAATATCCAGTCATCCCTCTCCCAAAAGAGAAGCTGGTTGACACCAACGGTG 915
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 964 AGGTGAAGAAATATCCAGTCATCCCTCTCCCAAAGGAGAAGCTGGTTGACACCAACGGTG 1023
Query 916 CAGGTGATGCATTTGTGGGAGGATTCATGTCACAGTTGGTGAAAGAGAAATCGATTGAGG 975
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1024 CAGGTGATGCATTTGTGGGAGGATTTATGTCACAGTTGGTGAAAGAGAAATCGATTGAGG 1083
Query 976 AATGCGTGAAAGCTGGATGCTATGCGTCGAACGTGGTGATCCAAAGATCTGGCTGCACTT 1035
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084 AATGCGTGAAGGCTGGATGCTATGCGTCGAACGTGGTGATCCAAAGATCTGGCTGCACTT 1143
Query 1036 ACCCTGAGAAGCCCGACTTTAAATAAACTATTGGGTCATCCTCAGTTTTGTGATATCTTC 1095
|||||||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||
Sbjct 1144 ACCCTGAGAAGCCCGACTTTAACTAAACAATTGGGTTACCCTCAGTTTTGTGATATCTTC 1203
Query 1096 CAAATAAAAC 1105
||||||||||
Sbjct 1204 CAAATAAAAC 1213
> AT3G09820.1 | Symbols: ADK1, ATADK1 | adenosine kinase 1 | chr3:3011990-3014944
FORWARD LENGTH=1487
Length=1487
Score = 1267 bits (686), Expect = 0.0
Identities = 941/1062 (89%), Gaps = 25/1062 (2%)
Strand=Plus/Plus
Query 16 TCATCAT-CATGGCTTCTTCTTCTAACTACGATGGAATCCTTCTCGGAATGGGTAACCCA 74
||||||| ||||||||| | ||| | | ||||||||||||| | |||||||| ||||||
Sbjct 124 TCATCATCCATGGCTTC--C-TCTGATTTCGATGGAATCCTTTTGGGAATGGGAAACCCA 180
Query 75 CTCCTCGATATCTCTGCCGTCGTCGA-CGACGAATTTCTC-ACCAAATACGACATCAAGT 132
|||||||| |||||||||||||||| | || | |||||| | ||||||||||||||| |
Sbjct 181 CTCCTCGACGTCTCTGCCGTCGTCGACCAAC-AGTTTCTCGA-CAAATACGACATCAAAT 238
Query 133 TGAACAATGCGATTCTCGCTGAGGACAAACATTTGCCCATGTATGATGAGATGAG-TAGC 191
||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||
Sbjct 239 TGAACAATGCGATTCTCGCAGAGGACAAACATTTGCCCATGTACGATGAAATGAGCCAG- 297
Query 192 AAGTTCAATGTTGAATACATTGCCGGAGGTGCTACTCAGAACTCAATCAAAGTGGCTCAG 251
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 298 AAGTTCAATGTTGAATACATTGCTGGAGGTGCTACCCAGAACTCAATCAAAGTGGCCCAG 357
Query 252 TGGATGCTTCAAATTCCTGGGGCAACCAGTTACATGGGATCCATTGGAAAGGACAAATAT 311
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 TGGATGCTTCAAGTTCCTGGGGCAACCAGTTACATGGGATCCATTGGAAAGGACAAATAC 417
Query 312 GGAGAGGCCATGAAGAAGGATGCTACAGCAGCTGGTGTCAATGTTCACTATTATGAAGAT 371
|||||||| |||||||||||||||||||||||||||||| |||| |||||||| ||||||
Sbjct 418 GGAGAGGCAATGAAGAAGGATGCTACAGCAGCTGGTGTCTATGTCCACTATTACGAAGAT 477
Query 372 GAGTCGGCACCTACTGGAACTTGCGGTGTCTGTGTTGTTGGTGGAGAAAGGTCTCTTATT 431
||| | ||||||| ||||||||||||||||||||| ||||||||||||| || || |||
Sbjct 478 GAGGCAACACCTACCGGAACTTGCGGTGTCTGTGTTCTTGGTGGAGAAAGATCGCTCATT 537
Query 432 GCGAATCTTTCAGCTGCAAACTGCTACAAGGTTGATCACCTT-AAGAAGCCTGAAAACTG 490
|| |||||||| ||||| || |||||||||||||| ||| || ||||||||||| |||||
Sbjct 538 GCCAATCTTTCTGCTGCTAATTGCTACAAGGTTGAACAC-TTGAAGAAGCCTGAGAACTG 596
Query 491 GGCAT-TGGTTGAGAAGGCCAAGTTCTATTACATTGCTGGATTCTTCCTCACAGTATCGC 549
||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
Sbjct 597 GGC-TCTGGTTGAGAAGGCCAAGTTTTATTACATTGCTGGATTCTTCCTCACGGTATCAC 655
Query 550 CTGAATCCATTCAGTTGGTATC-TGAGCATGCTGCTGCAAACAACAAGGTGTTCACAATG 608
| |||||||||||||||||| | ||| ||||||||||||||||||||||||||||| |||
Sbjct 656 CAGAATCCATTCAGTTGGTA-CGTGAACATGCTGCTGCAAACAACAAGGTGTTCACGATG 714
Query 609 AACCTTTCTGCTCCATTCATTTGTGAATTCTTCAAAGATGTGCAGGAGAAGTTCTTGCCA 668
|||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||||
Sbjct 715 AACCTTTCTGCTCCATTCATCTGTGAATTCTTCAAAGATGTTCAGGAGAAGTGCCTGCCG 774
Query 669 TACATGGACT-TCGTTTTCGGCAATGAAACAGAAGCAAGAACCTTCTCCAGGGTTCACGG 727
|||||||||| | |||| |||||||| || || ||||||||||||||||||||||||||
Sbjct 775 TACATGGACTATATTTTT-GGCAATGAGACCGAGGCAAGAACCTTCTCCAGGGTTCACGG 833
Query 728 CTGGGAGACTGAAGATGTCGAACAAATAGCCATCAAGATTTCACAGCTT-CCCAAGGCCA 786
|||||||||||| ||||| || ||||||||||||||||| || ||| || ||||| |||
Sbjct 834 CTGGGAGACTGATGATGTTGAGCAAATAGCCATCAAGATGTCCCAG-TTACCCAAAGCCT 892
Query 787 CGGGAACATACAAGAGGACCACTGTGATAACACAGGGCGCAGATCCAGTGGTTGTTGCTG 846
| ||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| ||||
Sbjct 893 CTGGAACATACAAGAGGACTACTGTGATTACACAAGGCGCAGATCCTGTGGTTGTCGCTG 952
Query 847 AAGATGGAAAGGTGAAGAAATATCCAGTCATCCCTCTCCCAAAAGAGAAGCTGGTTGACA 906
| |||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||||
Sbjct 953 AGGATGGAAAAGTGAAGAAGTACCCAGTCATCCCTCTCCCCAAAGAGAAGCTTGTTGACA 1012
Query 907 CCAACGGTGCAGGTGATGCATTTGTGGGAGGATT-CATGTCACAGTTGGTGAAAGAGAAA 965
||||||||||||||||||||||||||||||| || | |||| ||| ||||| | | ||||
Sbjct 1013 CCAACGGTGCAGGTGATGCATTTGTGGGAGGGTTTC-TGTCCCAGCTGGTGCACG-GAAA 1070
Query 966 TCG-ATTGAGGAATGCGTGAAAGCTGGATGCTATGCGTCGAACGTGGTGATCCAAAGATC 1024
| ||||| || || |||| || |||||||| ||||| ||||| |||||||| || ||
Sbjct 1071 GGGGATTGAAGAGTGTGTGAGGGCAGGATGCTACGCGTCAAACGTAGTGATCCAGAGGTC 1130
Query 1025 TGGCTGCACTTACCCTGAGAAGCCCGACTTTAAATAAA-CTA 1065
||| ||||||||||||||||| || ||||| || |||| |||
Sbjct 1131 TGGTTGCACTTACCCTGAGAAACCAGACTTCAACTAAATCTA 1172
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54166388055
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5