BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg939719 Length=1174 Score E Sequences producing significant alignments: (Bits) Value AT5G03390.1 | Symbols: | Protein of unknown function (DUF295) ... 1622 0.0 > AT5G03390.1 | Symbols: | Protein of unknown function (DUF295) | chr5:834988-836751 FORWARD LENGTH=1536 Length=1536 Score = 1622 bits (878), Expect = 0.0 Identities = 1081/1177 (92%), Gaps = 21/1177 (2%) Strand=Plus/Plus Query 1 GTCTAGGGTTTTCAATTTT-AACAATGTCTCAGCTTTTGGGTCGAATCGCTAAGATCTCC 59 ||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 250 GTCTAGGGTTTTC-ATTTTCAACAATGTCTCAGCTTTTGGGTCGAACCGCTAAGATCTCC 308 Query 60 TCAGTTGTGAAGAAGCAGAGACTCTGTTTCAGTGAACTGCGGTCTTTCTCCACGGCGGCG 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 309 TCAGTTGTGAAGAAGCAGAGACTCTGTTTCAGTGAACTGCGGTCTTTCTCCACGGCGGCG 368 Query 120 ACGCCGTATCTGCTTTT-CTGTGAGACCAACTACAGGTTGGTGAGGACACCATTTGGTGG 178 ||||||||||||||||| | || |||||||||| || | || | | |||||| Sbjct 369 ACGCCGTATCTGCTTTTAAAG-GATACCAACTACA----GG-GCGG----CGTCTGGTGG 418 Query 179 AGCAGTGGTCGACATTAACCTGTACGATCCGAGGAAGAAGGAAACAGTGAAAGTCCCCGA 238 | |||||||||||||||||||||| ||||||||||||||||||| ||||||| | | ||| Sbjct 419 ATCAGTGGTCGACATTAACCTGTATGATCCGAGGAAGAAGGAAATAGTGAAAATTCGCGA 478 Query 239 CCAATATCTGTCCAAGGAGCTCCAATGTACGATGAAGATGGGATCTTCGAGGGGATGGGT 298 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 479 CCAATATCTGTCGGAGGAGCTCCAATGTACGATGAAGATGGGATCTTCGAGGGGATGGAT 538 Query 299 TGTTGCGAGAAAC-ATATTCGA-CTCCACATTGCGTCTCACCAATATCTTCAACCCTTGT 356 |||||||| | || |||| ||| | |||||||| |||||| |||||||||||||| ||| Sbjct 539 TGTTGCGA-AGACGATATACGAGC-CCACATTGTATCTCACTAATATCTTCAACCCGTGT 596 Query 357 GCCTCTGTTTCGTCTCACAAGGTTATCACTCTGCCTCCATTGGAGGATGATGCTAAAGCT 416 |||||||||||||| || |||||| ||| ||||||||||||||||||||||||||||||| Sbjct 597 GCCTCTGTTTCGTCACATAAGGTTTTCAATCTGCCTCCATTGGAGGATGATGCTAAAGCT 656 Query 417 CTTATCTCCACTATCTCTTTCTCAGCCTCCCCAGACCAGCAAGACTGTGTAGTGGCAGCC 476 | |||||||| ||||||| | |||||||| ||| ||||||||||||||||| |||||| | Sbjct 657 CGTATCTCCAGTATCTCTCTATCAGCCTCTCCAAACCAGCAAGACTGTGTATTGGCAGTC 716 Query 477 AAGTCCTCTAGTAGTCCATTCCTCAGCCTGTGGCGGCCTGGTGACTCGGCTTGGACACGC 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 717 AAGTCCTCTAGTAGTCCATTCCTCAGCCTGTGGCGGCCTGGTGACTCGGCTTGGACACGC 776 Query 537 ATCAAGGTCCCGTTTCCTGCCTCCAAGGTGATAATGTATTCTGCGA-GAGACCGCAAGTT 595 |||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||||| Sbjct 777 ATCAAGGTCCCGTTTCCTGCCTCCAATGTGATGATGTATTCTG-GAAGAGACCGCAAGTT 835 Query 596 CTATCTCCTCCCAAGGGAGAGTAAGGAAGAGTACGAGGGTCCCATTGATCTCATCAACAC 655 |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 836 CTATCTCCTCCCCAGGGAGAGTAAGGAAGAGTGTGAGGGTCCCATTGATCTCATCAACAC 895 Query 656 TAGCTCCGACGACTTCCCTCAGGTGAGTCTGTACCAGGGATTCCCTAACTCTGACATCCC 715 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct 896 TAGCTCCGACGACTTCCCTCAGGTGACTCTGTACCAGAGATTCCCTAACTCTGACATCCC 955 Query 716 CGTGAGTAGACAAGAACAGCTTGTCTCTACTATCAAGACTAAATATCTCGTCGAGTCACC 775 ||||||||| |||||||||||| |||| | |||||||||| ||| || ||||||||||| Sbjct 956 CGTGAGTAGGCAAGAACAGCTTCTCTCAAGTATCAAGACTCGATACCTGGTCGAGTCACC 1015 Query 776 TTCTGGCGACTCCTTCATCGTTTACTGGTATAATGAGAGATCCTTATATTTGAAGGAAGG 835 ||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||| Sbjct 1016 TTCTGGCGACTCCTTCATCGTTTACTGGTGTAATGAGAGATCCTTCTATTGGAAGAAAGG 1075 Query 836 AAAAGTGGAGCCGTGGAACGGCAAGAACCCCCCTCCTAT-AAGGATCTCTTGCAGGAGTA 894 | ||||| ||||||||| ||| |||||||| |||||| | |||||||||||||||| || Sbjct 1076 AGAAGTGAAGCCGTGGACCGGAAAGAACCCTCCTCCT-TCAAGGATCTCTTGCAGGCTTA 1134 Query 895 AGACCAGAACCTTTGTGGTGTTTAGACAAGACCTTGAGCAAGGGTTCGGTTCATACACTG 954 ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||| Sbjct 1135 AGACCAGAACCTTTGTGGTTTTTAGACAAGACAGTGAGCAAGGAATCGGTTCATACACTG 1194 Query 955 AAGACATTGGCGATCTCTGCATTTTCCTAGGCCAAAGGGAGGCCTTTTGCTTCTCTGCAA 1014 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 1195 AAGACATTGGCGATCTCTGCATTTTCCTAGGCCATAGGGAGGCCTTTTGCGTCTCTGCAA 1254 Query 1015 CCGAATATCCCGGACTTCACCCTAATTCTGTCTACTATGCAAGCTCGGGCACTGGGTTTG 1074 |||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| Sbjct 1255 CCGAATATCCCGGACTTCGCCCTAATTCTGTCTACTATGCAACCTCGGGCACGGGGTTTG 1314 Query 1075 GTTACTACGACCTCTCCTCCAACACTCTCCACGACGTTATCCATGAGGCCCCTTTCTCGT 1134 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1315 GTTACTACGACCTCTCCTCCAACACTCTCCACGACGTTATCCATGAGGGCCTTTTCTCGT 1374 Query 1135 GGCTTGCCCCTCTCCAGTGAATATAGCTTATTTGCTC 1171 || ||||||| |||||||||||| ||||||||||||| Sbjct 1375 GGATTGCCCCACTCCAGTGAATAGAGCTTATTTGCTC 1411 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57630225660 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5