BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg939804 Length=522 Score E Sequences producing significant alignments: (Bits) Value AT5G03390.1 | Symbols: | Protein of unknown function (DUF295) ... 475 2e-133 AT5G04060.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 255 2e-67 > AT5G03390.1 | Symbols: | Protein of unknown function (DUF295) | chr5:834988-836751 FORWARD LENGTH=1536 Length=1536 Score = 475 bits (257), Expect = 2e-133 Identities = 298/318 (94%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 41 GGAGAAGTGGAGCCGTGGAACGGCAAGAACCCCCCTCCTAT-AAGGATCTCTTGCAGGAG 99 ||||||||| ||||||||| ||| |||||||| |||||| | |||||||||||||||| Sbjct 1074 GGAGAAGTGAAGCCGTGGACCGGAAAGAACCCTCCTCCT-TCAAGGATCTCTTGCAGGCT 1132 Query 100 TAAGACCAGAACCTTTGTGGTGTTTAGACAAGACCTTGAGCAAGGGATCGGTTCATACAC 159 ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||| Sbjct 1133 TAAGACCAGAACCTTTGTGGTTTTTAGACAAGACAGTGAGCAAGGAATCGGTTCATACAC 1192 Query 160 TGAAGACATTGGCGATCTCTGCATTTTCCTAGGCCAAAGGGAGGCCTTTTGCGTCTCTGC 219 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1193 TGAAGACATTGGCGATCTCTGCATTTTCCTAGGCCATAGGGAGGCCTTTTGCGTCTCTGC 1252 Query 220 AACCGAATATCCCGGACTTCACCCTAATTCTGTCTACTATGCAAGCTCGGGCACTGGGTT 279 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||| Sbjct 1253 AACCGAATATCCCGGACTTCGCCCTAATTCTGTCTACTATGCAACCTCGGGCACGGGGTT 1312 Query 280 TGGTTACTACGACCTCTCCTCCAACACTCTCCACGACGTTATCCATGAGGCCCCTTTCTC 339 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1313 TGGTTACTACGACCTCTCCTCCAACACTCTCCACGACGTTATCCATGAGGGCCTTTTCTC 1372 Query 340 GTGGCTTGCCCCTCTCCA 357 |||| ||||||| ||||| Sbjct 1373 GTGGATTGCCCCACTCCA 1390 > AT5G04060.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:1099118-1102058 FORWARD LENGTH=2204 Length=2204 Score = 255 bits (138), Expect = 2e-67 Identities = 158/167 (95%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 358 AGACGAGGAATCAATCATCTCAAGAGTCCGAGACTTGGCTCCTAAGTTCCTTTGGGAAGT 417 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1815 AGACGAGGAATCAATCGTCTCAAGAGTCCGAGACTTGGCTCCTAAGTTCCTTTGGGAAGT 1874 Query 418 TGAAACACATGAGCTTCAAGACAAATACAAGAAGACAGAAACTGTTCTATTTTGCAGAAA 477 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1875 TGAAGCACATGAGCTTCAAGACAAATACAAGAAGACAGAAACTGTTCTATTTTGCAGAAA 1934 Query 478 GATATTTTGGGCAATCGTTTGAAAA--TCTACTTGTGTAGAAATTCT 522 || ||||||||||||| |||||||| || || ||||||||||||| Sbjct 1935 GAAATTTTGGGCAATCCTTTGAAAAAGTCCAC--GTGTAGAAATTCT 1979 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24966371059 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5