BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg939865
Length=2342
Score E
Sequences producing significant alignments: (Bits) Value
AT5G04670.1 | Symbols: | Enhancer of polycomb-like transcripti... 3681 0.0
> AT5G04670.1 | Symbols: | Enhancer of polycomb-like transcription
factor protein | chr5:1337839-1340884 REVERSE LENGTH=2460
Length=2460
Score = 3681 bits (1993), Expect = 0.0
Identities = 2229/2340 (95%), Gaps = 28/2340 (1%)
Strand=Plus/Plus
Query 21 ATGCCGTCGGTGGGAATGAGACGAACCACTAGGGTTTTCGGGGTGGTTAAAGCCGCAGAC 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCGTCGGTGGGAATGAGACGAACCACTAGGGTTTTCGGGGTGGTTAAAGCCGCAGAC 60
Query 81 GGAGCCCGTGTCCTCCGTTCGGGTCGTCGGATCTGGCCTAACGTCGGCGAACCAAAGGTA 140
|||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct 61 GGAGCCCGTGTCCTCCGTTCGGGTCGCCGGATCTGGCCTAACGTTGGCGAGCCAAAGGTA 120
Query 141 CGGCGAGCTCATGACGTGGTGGATCGAGATTGTGATAGCGTTTTGAAGAATCAGAACAAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CGGCGAGCTCATGACGTGGTGGATCGAGATTGTGATAGCGTTTTGAAGAATCAGAACAAA 180
Query 201 ACCAAAGGGAATAAAG--T-CTCCGG---AAGTAACAGCCAGCCTTGTAGCCCGAGACAA 254
||||||| ||||||| | |||||| |||||||||||||||||||||||||| ||||
Sbjct 181 TCCAAAGGCAATAAAGTCTCCTCCGGTAAAAGTAACAGCCAGCCTTGTAGCCCGAAACAA 240
Query 255 GTTTCTAGTGAGAAAGAAGACAAAGTAGATGACTTTCCGGTCAGAAAACGGAGGAAAGTG 314
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 241 GTTTCTAGTGAGAAAGAAGACAAAGTAGATGACTTTCCGGTCACAAAACGGAGGAAAGTG 300
Query 315 AGAAATGAAGGTGTAGGAGATGAAAAGACTGTGGATAAGATGTTTGGGATTGTATATAGT 374
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 AGAAATGAAGGTGTAGGGGATGAAAAGACTGTGGATAAGATGTTTGGGATTGTATATAGT 360
Query 375 AGGAAAAGGAAGAGACTTTCTGAA-C--CATCAAGTGATAGATCAGAAGTGCCACTACGA 431
||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||||||
Sbjct 361 AGGAAAAGGAAGAGACTTTGTGAACCATCATCAAGTGATAGATCAGAAGAGCCACTACGA 420
Query 432 AGCCTCAAGTTTTATCGCAGGCGAAGAAGACTCTCACATCGGGTTTCTTCAGTGCTTACT 491
||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 421 AGCCTGAAGTTTTATCGCAGGCGAAGAAAACTCTCACAACGGGTTTCTTCAGTGCTTACT 480
Query 492 CTTACAGTAGATTGGTCATGTGAGGATTGCTGGTTATTAAGTGTTTTCGGTTTGGCAATG 551
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 481 CTTACAGTAGATTGGTCATGTGAGGATTGCTGGTTTTTAACTGTTTTCGGTTTGGCAATG 540
Query 552 AGATATACGAGGAGGGAAGAACTGAGGCTGTCTTCTCTTGCTTCTTTCTTCTTGTCTCAA 611
||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct 541 AGATATATAAGGAGGGAAGAACTCAGGCTGTCTTCACTTGCGTCTTTCTTCTTGTCTCAA 600
Query 612 CCTATCAACCAAGTGTTTGCAGACCATGGCGTGCGATTCCTTGTGAAGCCTCCTCTTAGC 671
|||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||
Sbjct 601 CCTATCAACCAAGTGTTTGCAGACCATGGCGTGCGATTCCTTGTGAGGTCTCCCCTTAGC 660
Query 672 TCAAGGGGTGTCTGCAAGTTCTTTGGGGCCATGAATTGTCTACCTCTCTTTTCAGCAGAT 731
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 661 TCAAGGGGTGTCTGCAAGTTTTTTGGGGCCATGAGTTGTCTACCTCTCTTTTCAGCAGAT 720
Query 732 TTTGCTGTCATTCCTCAATGGTTCATGGATATGCATTTCACTCTATTTCG-AAGAGTGGC 790
|||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| |
Sbjct 721 TTTGCTGTCATTCCTCGATGGTTCATGGATATGCATTTCACTCTATTT-GTAAGAGT-TC 778
Query 791 -ACCACGCTCTTTCTTTTTTGTAGAGAAATCTCTGTATTTGCTAAACAATCCAATTGAAG 849
||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 779 TACCACGCTCCTTCTTTTTCGTAGAGAAATCTCTGTATTTGCTAAACAATCCGATTGAAG 838
Query 850 AATCTGATTCGGAGTCTGAATTAGCTTTACCTGAACCTTGTACTCCGAGGAATGGAGGTG 909
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 839 AATCAGATTCCGAGTCTGAATTAGCTTTACCTGAACCTTGTACTCCGAGGAATGGAGTTG 898
Query 910 TAGTTGGGTTACATCCATCAGTGAGAGCCTCGAAGTTAACGGGAGGAAATGCTCAATATA 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 899 TAGTTGGGTTACATCCATCAGTGAGAGCCTCGAAGTTAACGGGAGGAAATGCTCAGTATA 958
Query 970 GAGGCAATTTAGGTTCTCACAGTTTCCAAAAGAGGAGAAGCTCTTTGAGAAGGAGAAGAG 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 GAGGCAATTTAGGTTCTCACAGTTTCCAAAAGAGGAGAAGCTCTTTGAGAAGGAGAAGAG 1018
Query 1030 CAAGAAATCTTTCTCACAATGCACACAAGTTGAACAATGGAACACCGGTTTTTGATATAT 1089
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1019 CAAGAAATCTTTCTCATAATGCACACAAGTTGAACAATGGAACACCTGTTTTTGATATAT 1078
Query 1090 CAGGAAGTAGGAAAAACAGGACAGCAGCAGTATCGTCGAGAAAGCTTAGAAGCTCGGTGC 1149
| |||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||
Sbjct 1079 CGGGAAGTAGGAAAAACAGGACAGCAGCAGTATCATCGAAAAAGCTTAGAAGTTCGGTGC 1138
Query 1150 TAAGTAACTCATCTCCGGTTTCAAATGGGATTAGTATCATTCCATTGACGAAGACAAAAG 1209
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct 1139 TAAGTAACTCATCTCCGGTTTCAAATGGGATAAGTATCATTCCAATGACGAAGACAAAAG 1198
Query 1210 AGGAACTTGATTCTTTATGTTGTTCTGCGAATATATTGATGATACATTCAGACAGATGCA 1269
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 AGGAACTTGATTCTATATGTTGTTCTGCGAATATATTGATGATACATTCAGACAGATGCA 1258
Query 1270 CCAGAGAAGAAGGATTTACTGTCATGTTGGAGGCGTCGTCTTCAAAGGAGTGGTTCCTTG 1329
|||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1259 CCAGAGAAGAAGGATTTAGTGTCATGTTGGAGGCTTCGTCTTCGAAGGAGTGGTTCCTTG 1318
Query 1330 TTATTAAGAAAGATGGGGCAATCAGATACAGCCACAGGGCACAAAGGACTATGAGACCTT 1389
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1319 TTATTAAGAAAGATGGGGCAATCAGATACAGCCACATGGCACAAAGGACTATGAGACCTT 1378
Query 1390 GT-TCTTGCAACCGGATTACACATGCCACAGTATGGATGGGAGGTGATAATTGGAAGCTT 1448
| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 -TCTCTAGCAACCGGATTACACATGCCACAGTATGGATGGGAGGTGATAATTGGAAGCTT 1437
Query 1449 GAGTTTTGTGACAGACAAGATTGGCTTGGTTTTAAAGATATATATAAAGAATGCTATGAA 1508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 GAGTTTTGTGACAGACAAGATTGGCTTGGTTTTAAAGATATATATAAAGAATGCTATGAA 1497
Query 1509 CGGAATGTATTAGAACAGAGTGTGAAAGTCATTCCTATTCCTGGGGTCAGAGAAGTGTGT 1568
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498 CGGAATCTATTGGAACAGAGTGTGAAAGTCATTCCTATTCCTGGGGTCAGAGAAGTGTGT 1557
Query 1569 GGATATGCAGAGTATATCGATAATTTTCCCTCCTTTTCTAGGCCA---GTTTCATATATA 1625
|||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct 1558 GGATATGCAGAGTATATCGATAATTTCCCCTCCTTTTCTAGGCCACCAGTTTCATATATA 1617
Query 1626 TCTGTGAACGAAGATGAGGTTTCAAGGGCCATGGCTCGAGGTATTGCTCTTTATGACATG 1685
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1618 TCTGTGAACGAAGATGAGGTTTCAAGGGCCATGGCTCGAAGTATTGCTCTTTATGACATG 1677
Query 1686 GATTCTGAAGATGAAGAGTGGCTCGAAAGGCAGAACCGGAAAATGCTCAGTGAAGAGGAT 1745
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1678 GATTCTGAAGATGAAGAGTGGCTCGAAAGGCAGAACCAGAAAATGCTCAATGAAGAGGAT 1737
Query 1746 GACCAATTTCTACAACTTCAGCGGGAAGCTTTTGAGTTGATGATTGATGGGTTTGAAAAG 1805
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 GACCAATATCTACAACTTCAGCGGGAAGCTTTTGAGTTGATGATTGATGGGTTTGAAAAG 1797
Query 1806 TATCATTTCCATAGCCCTGCCGATGATCTCTTAGATGAAAAAGCAGCCACTATAGCTAGT 1865
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 1798 TATCATTTCCATAGCCCTGCCGATGATCTCTTGGATGAAAAAGCAGCCACTATAGGTAGT 1857
Query 1866 CTTTCGTATCTGGGTAGGCAAGAGGTGGTTGAAGCAGTACACGATTACTGGTTGaaaaaa 1925
|||| |||||||||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct 1858 ATTTCATATCTGGGTAGGCAAGAGGTGGTTGAGGCGGTACATGATTACTGGTTGAAAAAA 1917
Query 1926 aGGAAGCAGCGAAAGGCACCACTCCTCAGAATTTTCCAGGGTCATCAAGTGAAGAAAACG 1985
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1918 AGGAAGCAGCGAAAAGCACCACTCCTCAGAATTTTCCAGGGTCATCAAGTGAAGAAAACG 1977
Query 1986 -ACGCTACTTTCCAAACCTGTGTTTCGTAAAAGAAGATCCTTCAAAAGACAGGGGAGTCA 2044
| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1978 CA-GCTACTTTCCAAACCTGTGTTTCGTAAAAGAAGGTCCTTCAAAAGACAGGGGAGTCA 2036
Query 2045 ACTCCATGGAAAAGCCAAACAGACAAGCCCTTGGATCGTGACTGTAAAAGCGACTGAACC 2104
|||||||||||||||||||||||||||||||||||| ||| ||||||| ||| | |||||
Sbjct 2037 ACTCCATGGAAAAGCCAAACAGACAAGCCCTTGGATGGTGGCTGTAAAGGCGGCAGAACC 2096
Query 2105 AGAGGAACAAAACGATTAT-CTCAGAATGGAAGAAGCCAAAGTTTTTGCTGATAGAACCA 2163
||||||| || ||||| || |||||||||||||||||||||||||| ||||||| |||||
Sbjct 2097 AGAGGAAGAAGACGAT-ATTCTCAGAATGGAAGAAGCCAAAGTTTTGGCTGATAAAACCA 2155
Query 2164 TGGAAACTGCCATAGCCAAAAGAAGACGAGCACAAGTTCTTGCAGAAAACGCAGAT-TTG 2222
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 2156 TGGAAACTGCCATAGCCAAAAGAAGACGAGCACAAATTCTTGCAGAAAACGCAGATCTTG 2215
Query 2223 GCTGTTTACAAAGCGGTG-GTGGCTCTCAGGATTGCAGAAGCCATTAAAGAAGCTGAATC 2281
||||||||||||| || | ||||||||||||||||||||||||||| ||||| |||||
Sbjct 2216 -CTGTTTACAAAGCAATGAG-GGCTCTCAGGATTGCAGAAGCCATTAAGGAAGCCGAATC 2273
Query 2282 GAGGGAGGTGGACACAACCACTGT-T-GCACTGAAATGGTAACGATGGAAAATGTTACTG 2339
||||||||||||||||||| ||| | | ||||||||||||| ||| |||||||||||||
Sbjct 2274 GAGGGAGGTGGACACAACCGTTGTCTAGAACTGAAATGGTAAAGATAGAAAATGTTACTG 2333
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116264462220
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5