BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg939971

Length=1822
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G05450.1 | Symbols:  | P-loop containing nucleoside triphosp...  3049    0.0   
  AT1G71370.1 | Symbols:  | DEA(D/H)-box RNA helicase family prot...   957    0.0   
  AT1G71280.1 | Symbols:  | DEA(D/H)-box RNA helicase family prot...   451    1e-125


> AT5G05450.1 | Symbols:  | P-loop containing nucleoside triphosphate 
hydrolases superfamily protein | chr5:1612006-1615356 
FORWARD LENGTH=2014
Length=2014

 Score = 3049 bits (1651),  Expect = 0.0
 Identities = 1768/1825 (97%), Gaps = 5/1825 (0%)
 Strand=Plus/Plus

Query  1     GAGAGGCAGCGGCGGCCGTCATGGATTCATCGGCGAACATAAACAAAGCTTTAACGGAGA  60
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct  52    GAGAGGCAGCGGCGGCCGTCATGGATTCATCGGCGAACATAAACAAAGCTCTAACGGAGA  111

Query  61    CGCGTTTCTCCGACCTCGAACCTCCACTCTCCGGAGATATCATTGAGGCGCTTAATCAGT  120
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct  112   CGCGTTTCTCCGACCTCGAACCTCCACTCTCCGGAGATATCATTGAGGCTCTTAATCAGT  171

Query  121   CTGATTTCGAGTTCTGCACTCCGGTTCAAGCCGCGACGATTCCTTTACTCTGTAGTTACA  180
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct  172   CTGATTTCGAGTTCTGCACTCCGGTTCAAGCCGCGACGATCCCTTTACTCTGTAGTTACA  231

Query  181   AGGATGTTGCCGTCGACGCTGCCACCGGTTCTGGAAAAACCCTAGCTTTCGTCG-TCCCT  239
             ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| 
Sbjct  232   AGGATGTTGCCGTCGACGCTGCCACTGGTTCTGGAAAAACCCTAGCTTTCGTCGTTCCC-  290

Query  240   CTCGTTGAAATCCTCCGTCGATCCACCTCATTCCCTCCGAAGCCTCATCAGGTCATGGGG  299
             ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  291   CTCGTAGAAATCCTCCGTCGATCCACCTCATTCCCTCCGAAGCCTCACCAGGTCATGGGG  350

Query  300   GTGATTATATCGCCAACAAGAGAGCTATCGACGCAGATATATAATGTGGCACAACCATTT  359
             ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct  351   GTGATTATATCGCCAACGAGAGAGCTATCAACGCAGATATATAATGTCGCACAACCATTT  410

Query  360   GTTTCGACTTTGGCAAATGTGAACTCTGTGTTACTTGTTGGAGGCCGAGAGGTGAAAGCT  419
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  411   GTTTCGACTTTGGCAAATGTGAACTCTGTGTTGCTTGTTGGAGGCCGAGAGGTGAAAGCT  470

Query  420   GACACGAAGATTATTGAAGAAGAAGGATGCAATCTCTTGATTGGTACACCTGGAAGGCTT  479
             |||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct  471   GACATGAAGATTATTGAAGAAGAAGGATGCAATGTCTTGATTGGTACACCTGGAAGACTT  530

Query  480   TCAGATATAATGGAACGAATGGAGATTCTCGATTTTCGAAATCTTGAGATTCTTA-TCTT  538
             || ||||| |||||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct  531   TCTGATATTATGGAACGAATGGAGATTCTGGATTTTCGAAATCTTGAGATTCTTATTC-T  589

Query  539   AGACGAGGCTGATAGGCTTTTGGAGATGGGGTTCCAAAGGCAGGTGAATTACATTATCTC  598
             ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  590   AGATGAGGCAGATAGGCTTTTGGAGATGGGGTTCCAAAGGCAGGTGAATTACATTATCTC  649

Query  599   ACGCTTGCCAAAGCAGAGGAGGACTGGTCTCTTTTCAGCTACACAAACAGAGGGCGTTGA  658
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  650   ACGCTTGCCAAAGCAGAGGAGGACTGGCCTCTTTTCAGCTACACAAACAGAGGGCGTTGA  709

Query  659   AGAGCTCGCCAAGGCTGGACTTAGGAACCCTGTGAGAGTTGAAGTTCGAGCTGAGGCGAA  718
             |||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||
Sbjct  710   AGAGCTCGCCAAGGCTGGGCTTAGGAACCCTGTGAGAGTTGAAGTTCGAGCTAAGTCGAA  769

Query  719   GTCGGAATCTTCCCAGCAATTTACAAACTCGAAAACCCCTTCTGGTCTTCATCTTGAGTA  778
             ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct  770   GTCGGAATCATCCCAGCAATTGACAAACTCGAAAACCCCTTCTGGTCTTCATCTTGAGTA  829

Query  779   TATCGAATGCGAAGCAGATAAGAAATCATCACAACTAGTGGATCTCCTCATCAAGAACAG  838
             ||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct  830   TATGGAATGCGAAGCAGATAAAAAATCATCACAACTAGTTGATCTCCTCATCAAGAACAG  889

Query  839   TGATAAAAAGCTTATAGTATTCTTCATGACCTGTGCTTCTGTTGACTACTGGGGACTCGT  898
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  890   TGATAAAAAGCTTATAGTATTCTTCATGACCTGTGCTTCTGTTGACTACTGGGGACTCGT  949

Query  899   ACTTTCAAAAATTCCTGCCCTGAAGTCTATATCTTTAATTCCTATCCATGGGGATATGAA  958
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  950   ACTTTCAAAAATTCCTGCCCTGAAGTCCATATCTTTAATTCCTATCCATGGGGATATGAA  1009

Query  959   GCAGAATGCAAGAGACAAGGCATTAGCTTCGTTTACTAAAGCATCAAGCGGTGCCCTTCT  1018
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  1010  GCAGAATGCAAGAGACAAGGCATTAGCTTCGTTTACTAAAGCATCAAGTGGTGCCCTTCT  1069

Query  1019  GTGCACAGACGTTGCTGCACGTGGACTTGATATTCCAGGCATTGATTATGTAGTTCAGTA  1078
             ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  1070  GTGCACAGACGTTGCTGCACGTGGACTTGATATTCCAGGCATTGATTATGTTGTTCAGTA  1129

Query  1079  TGATCCCCCACAAGACCCAAATATGTTCAACCACAGGGCCGGCAGAACTGCAAGATTGGG  1138
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct  1130  TGATCCCCCACAAGACCCAAATATGTTCAACCACAGGGCCGGCAGAACTGCAAGATTAGG  1189

Query  1139  AAGACTAGGGAAGGCCATTGTGTTTTTACTGCCTAAGGAGGAAGCCTATGTAGAGTTTAT  1198
             ||||| ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct  1190  AAGACAAGGGAGGGCCATTGTGTTTTTACTGCCCAAGGAAGAAGCCTATGTAGAGTTTAT  1249

Query  1199  GCGCATAAGAAGAGTCCCTCTGGAAGAGAGAAAATGCTCTGAGGACGCATCCGATGTCAT  1258
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct  1250  GCGCATAAGAAGAGTCCCTTTGGAAGAGAGAAAATGCTCTGAGGACGCATCCGATGTCAT  1309

Query  1259  CCCGATCATACGTTCAGCTGCCATGAAGGACCGAGCAGTGTTGGAGAAGGGATTAAAGGC  1318
             |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct  1310  CCCGATTATACGTTCAGCTGCCATGAAGGACCGAGCAGTGATGGAGAAGGGATTAAAGGC  1369

Query  1319  ATTTGTTTCTTTTGTCCGTGCTTATAAGGAGCATCACTGCTCTTTCATTTTCAGATGGAA  1378
             ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1370  ATTTGTTTCCTTTGTCCGTGCTTATAAGGAGCATCACTGCTCTTTCATTTTCAGATGGAA  1429

Query  1379  AGAACTTGAAATTGGAGAGTTAGCCATGGGATATGGCCTCTTGTATCTTCCTTCAATGTC  1438
             ||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct  1430  AGACCTTGAGATTGGAAAGTTAGCCATGGGATATGGCCTCTTGTATCTTCCTTCAATGTC  1489

Query  1439  TGAAGTTAAACAACACAGACTTTCCAGTGAGGGTTTCACACCTGTTGAAGGTGTCAAGTT  1498
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct  1490  TGAAGTTAAACAACACAGACTTTCCAGTGAGGGTTTCACACCAGTTGAAGGTGTCAAGTT  1549

Query  1499  TGACGAAATAAAATTCAAGGACAAATCTCGGgagaaacaaagacagcaaaacttacaagt  1558
             ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct  1550  TGAAGAAATAAAATTCAAGGACAAATATCGGGAGAAACAAAGACAGCAAAACTTACAAGT  1609

Query  1559  aaggaaagagaaacggcaagaagagaaaagagagaaaggcaagagaaaaagGGTTGATGC  1618
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct  1610  AAGGAAAGAGAAACGGCAAGAAGAGAAAAAAGAGAAAGGCAAGAGAAAAAGGGTTGATGC  1669

Query  1619  TCCTACTACTAATGATCCTAAGAAAGCGTCGAGAAAGTTAACAGGGAAGCAAAGACAAAC  1678
             | || ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct  1670  TTCTGCTAGTAATGATCCTAAGAAAGCGTCGAGAAAGTTAACGGGGAAACAAAGACAAAC  1729

Query  1679  TATTCAAACTGCTGAAGATGAAGAAGTGATGGATCGAGATTATAAGTTAATGATAAAAGT  1738
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  1730  TATTCAAACTGCTGAAGATGAAGAAGTGATGGATCGAGATTATAAGTTGATGATAAAAGT  1789

Query  1739  AAAGAAAGGGTTAATTAAAGAAGATGAATATGAAAGACTTACAGGAGATGATGATTTATT  1798
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1790  AAAGAAAGGGTTAATTAAAGAAGATGAATATGAAAGACTTACAGGAGATGATGATTTATT  1849

Query  1799  CTGATGAGAAGAAACAAA-CCTGCA  1822
             |||||||||||||||||| ||||||
Sbjct  1850  CTGATGAGAAGAAACAAAACCTGCA  1874


> AT1G71370.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein 
| chr1:26897005-26899434 REVERSE LENGTH=1960
Length=1960

 Score =  957 bits (518),  Expect = 0.0
 Identities = 912/1097 (83%), Gaps = 47/1097 (4%)
 Strand=Plus/Plus

Query  742   CAAACTCGAAAACCCCTTCTGGTCT-TCATCT-TGAGTATATCGAATGCGAAGCAGAT-A  798
             |||| ||||||||  |||||||||| | || | ||||||| |  |||||||||||||| |
Sbjct  748   CAAAGTCGAAAACGTCTTCTGGTCTGT-AT-TGTGAGTATTTAAAATGCGAAGCAGATCA  805

Query  799   AGAAATCATCACAACTAGTGGATCTCCTCATCAAGAACAGTGATAAAAAGCTTATAGTAT  858
             | || ||||||||||||||| ||||||| ||| ||||||   ||||||||||| | ||||
Sbjct  806   A-AAGTCATCACAACTAGTGCATCTCCTGATCGAGAACAAAAATAAAAAGCTTGTCGTAT  864

Query  859   TCTTCATGACCTGTGCTTCTGTTGACTACTGGGGACTCGTACTTTCAAAAATTCCTGCCC  918
             |||||||||| ||||||| |||||| |||||||||||||||||||||||||||||| |||
Sbjct  865   TCTTCATGACATGTGCTTGTGTTGATTACTGGGGACTCGTACTTTCAAAAATTCCTACCC  924

Query  919   TGAAGTCTATAT-CTT-TAATTCCTATCCATGGGGATATGAAGCAGAATGCAAGAGACAA  976
             | ||||| || | ||| |  |||| | ||||||| | ||| | ||||| |  ||||||| 
Sbjct  925   TCAAGTCCATTTCCTTCT-TTTCC-ACCCATGGGAAGATGGATCAGAAAGGTAGAGACAC  982

Query  977   GGCATTAGCTTCGTTTACTA-AAGCATCAAGCGGTGCCCTTCTGTGCACAGACGTTGCTG  1035
             |||||||||||||||||| | | ||||||||||||| |||||| |||||||| || ||||
Sbjct  983   GGCATTAGCTTCGTTTAC-AGAGGCATCAAGCGGTGTCCTTCTATGCACAGATGTCGCTG  1041

Query  1036  CACGTGGACTTGATATTCCAGGCATTGATTATGTAGTTCAGTATGATCCCCCACAAGACC  1095
             ||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||
Sbjct  1042  CACGTGGACTTGACATTCCAGGCATCGATTACGTTGTTCAGTATGATCCCCCACAAGACC  1101

Query  1096  CAAATATGTTCAACCACAGGGCCGGCAGAACTGCAAGATTGGGAAGACTAGGGAAGGCCA  1155
             || || | || | ||| ||||  ||||| ||||||||| ||| ||||| ||| | |||||
Sbjct  1102  CAGATGTATTTATCCATAGGGTTGGCAGGACTGCAAGAATGGAAAGACAAGGTAGGGCCA  1161

Query  1156  TTGTGTTTTTACTGCCTAAGGAGGA-AGCCTATGTAGAGTTTATGCGCATAAGAAGAGTC  1214
             ||||||||||| |||| ||||| || || |||||||||||| ||||||||  |||| |||
Sbjct  1162  TTGTGTTTTTAATGCCCAAGGA-GACAGACTATGTAGAGTTCATGCGCATTCGAAGGGTC  1220

Query  1215  CCTCTGGAAGAGAGAAAATGCTCTGAGGACGCATCCGATGTCATCCCGATCATACGTTCA  1274
             |||||  | |||||||||||||||||| |||| || |||||||||||||| |||||||||
Sbjct  1221  CCTCTTCAGGAGAGAAAATGCTCTGAGAACGCTTCTGATGTCATCCCGATTATACGTTCA  1280

Query  1275  GCT-GCCATGAAGGACCGAGCAGTGTTGGAGAAGGGATTAAAGGCATTTGTTTCTTTTGT  1333
              || ||||| |||||||| ||||||||||||||||||||| ||||||||||||| |||||
Sbjct  1281  -CTAGCCATCAAGGACCGGGCAGTGTTGGAGAAGGGATTACAGGCATTTGTTTCCTTTGT  1339

Query  1334  CCGTGCTTATAAGGAGCATCACTGCTCTTTCATTTTCAGATGGAAAGAACTTGAAATTGG  1393
             ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| ||
Sbjct  1340  CCGTGCTTATAAGGAGCATCACTGCTCTTACATTTTCAGTTGGAAAGGACTTGAAATCGG  1399

Query  1394  AGAGTTAGCCATGGGATATGGCCTCTTGTATCTTCCTTCA-ATGTCTGAAGTTAAACAAC  1452
             | |||||||||||||||||||| |||||| | |||||| | || ||||||||||||||| 
Sbjct  1400  AAAGTTAGCCATGGGATATGGCATCTTGTCTTTTCCTT-ACATATCTGAAGTTAAACAAG  1458

Query  1453  ACAGACTTTCCAGTGAGGGTTTCACACCTGTTGAAGGTGTCAAGTTTGACGAAATAAAAT  1512
             ||||| ||  || ||  ||||| ||||||||  ||||  ||| |||||| || |||||||
Sbjct  1459  ACAGAATTGGCATTGTCGGTTTTACACCTGTCCAAGGCATCACGTTTGAGGACATAAAAT  1518

Query  1513  TCAAGGACAAATCTCGGgagaaacaaagacagcaaaacttacaagtaaggaaagagaaac  1572
              |||| |||||||||||||||||||||||||||||||||||| || ||||||||| ||||
Sbjct  1519  ACAAGAACAAATCTCGGGAGAAACAAAGACAGCAAAACTTACTAGCAAGGAAAGACAAAC  1578

Query  1573  ggcaagaagagaaa-agagagaaaggcaagagaaaaagGGTTGAT-GCTCCTACTACTAA  1630
              |||| |||| ||| |||| |||| |||||| |||  |  |  |  |   |   |  | |
Sbjct  1579  TGCAACAAGA-AAAGAGAGGGAAACGCAAGA-AAA--GC-TCCAAAGAGGCGG-T--TGA  1630

Query  1631  TGATCCTAAGAAAGCGTCGAGAAAG------TTAACAGGGAAGCAAAGACAAACTATTCA  1684
             |||| |||| |||||||||||||||      ||||| |||| ||||||||||||||| ||
Sbjct  1631  TGATTCTAACAAAGCGTCGAGAAAGAGAAAGTTAACGGGGAGGCAAAGACAAACTATCCA  1690

Query  1685  AACTGCTG-AAGATGAAGAAGTGATGGATC-GAGATTATAAG-TTAATG-ATAAAAGTAA  1740
             ||| || | ||||||||||||  ||| ||  ||||||||| | ||| || | |||| | |
Sbjct  1691  AACAGC-GCAAGATGAAGAAGAAATGAATTTGAGATTATA-GCTTACTGGA-AAAACTGA  1747

Query  1741  AGAAAGGGTTAATTAAAGAAGATGAATATGA-AAGACTTACAGGAGATGATGATTTAT-T  1798
             ||||||| | ||||| ||||||||| | ||  || ||||||||||| | ||||||| | |
Sbjct  1748  AGAAAGGCTCAATTATAGAAGATGATTTTGCTAA-ACTTACAGGAGCTCATGATTT-TGT  1805

Query  1799  CTGATGAGAAGAAACAA  1815
             ||||| | ||||| |||
Sbjct  1806  CTGAT-A-AAGAAGCAA  1820


> AT1G71280.1 | Symbols:  | DEA(D/H)-box RNA helicase family protein 
| chr1:26870141-26872152 REVERSE LENGTH=1519
Length=1519

 Score =  451 bits (244),  Expect = 1e-125
 Identities = 464/566 (82%), Gaps = 31/566 (5%)
 Strand=Plus/Plus

Query  1265  CATACGTTCAGCT-GCCATGAAGGACCGAGCAGTGTTGGAGAAGGGATTAAAGGCATTTG  1323
             |||||||||| || ||||| |||||||| | |||||||||||||||||||||||||||||
Sbjct  939   CATACGTTCA-CTAGCCATCAAGGACCGGGAAGTGTTGGAGAAGGGATTAAAGGCATTTG  997

Query  1324  TTTCTTTTGTCCGTGCTTATAAGGAGCATCACTGCTCTTTCATTTTCAGATGGAAAGAAC  1383
             |||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||| ||
Sbjct  998   TTTCCTTTGTCCGTGCTTATAAGGAGCATCAATGCTCTTACATTTTCAGTTGGAAAGGAC  1057

Query  1384  TTGAAATTGGAGAGTTAGCCATGGGATATGGCCTCTTGTATCTTCCTT-CAATGTCTGAA  1442
             ||||||| ||| |||||||||||||||||||| |||||| | |||||| || | ||||||
Sbjct  1058  TTGAAATCGGAAAGTTAGCCATGGGATATGGCATCTTGTCTTTTCCTTACA-TATCTGAA  1116

Query  1443  GTTAAACAACACAGACTTTCCAGTGAGGGTTTCACACCTGTTGAAGGTGTCAAGTTTGAC  1502
             ||||||||| ||||| ||  || ||  ||||| ||||||||  ||||  ||| |||||| 
Sbjct  1117  GTTAAACAAGACAGAATTGGCATTGTCGGTTTTACACCTGTCCAAGGCATCACGTTTGAG  1176

Query  1503  GAAATAAAATTCAAGGACAAATCTCGGgagaaacaaagacagcaaaacttacaagtaagg  1562
             || |||||||||||| |||||||||||||||||||||| ||||||||||||  || ||||
Sbjct  1177  GACATAAAATTCAAGAACAAATCTCGGGAGAAACAAAGGCAGCAAAACTTATTAGCAAGG  1236

Query  1563  aaagagaaacggcaagaagagaaa-agagagaaaggcaagagaaaaagGGTTGAT-GCTC  1620
             ||||| |||| |||| |||| ||| |||| |||| |||||| |||  |  |  |  |   
Sbjct  1237  AAAGACAAACTGCAACAAGA-AAAGAGAGGGAAACGCAAGA-AAA--GC-TCCAAAGAGG  1291

Query  1621  CTACTACTAATGATCCTAAGAAAGCGTCGAGAAAG------TTAACAGGGAAGCAAAGAC  1674
             |   |  | ||||| |||| |||||||||||||||      ||||| |||| ||||||||
Sbjct  1292  CGG-T--TGATGATTCTAACAAAGCGTCGAGAAAGAGAAAGTTAACGGGGAGGCAAAGAC  1348

Query  1675  AAACTATTCAAACTGCTGAAGATGAAGAAGTGATGGATC-GAGATTATAAG-TTAATGAT  1732
             ||||||| ||||| ||| ||||||||||||  ||| ||  ||||||||| | ||| ||| 
Sbjct  1349  AAACTATCCAAACAGCTCAAGATGAAGAAGAAATGAATTTGAGATTATA-GCTTACTGAA  1407

Query  1733  AAAAGTAAAGAAAGGGTT-AATTAAAGAAGATGAATATGA-AAGACTTACAGGAGATGAT  1790
             |||| | |||||||| || ||||| ||||||||| | ||  || ||||||||||| | ||
Sbjct  1408  AAAACTGAAGAAAGG-TTCAATTACAGAAGATGATTTTGCTAA-ACTTACAGGAGCTCAT  1465

Query  1791  GATTTAT-TCTGATGAGAAGAAACAA  1815
             ||||| | |||||| | ||||| |||
Sbjct  1466  GATTT-TGTCTGAT-A-AAGAAGCAA  1488



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 90160178820


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5