BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg940194
Length=3015
Score E
Sequences producing significant alignments: (Bits) Value
AT5G07350.2 | Symbols: Tudor1, AtTudor1, TSN1 | TUDOR-SN protei... 5018 0.0
AT5G61780.1 | Symbols: Tudor2, AtTudor2, TSN2 | TUDOR-SN protei... 2854 0.0
AT2G11271.1 | Symbols: | unknown protein; Has 30201 Blast hits... 180 8e-44
> AT5G07350.2 | Symbols: Tudor1, AtTudor1, TSN1 | TUDOR-SN protein
1 | chr5:2320021-2325419 REVERSE LENGTH=3182
Length=3182
Score = 5018 bits (2717), Expect = 0.0
Identities = 2891/2977 (97%), Gaps = 3/2977 (0%)
Strand=Plus/Plus
Query 11 AGCCAGTGAACATGGCAACAACGACTGAGAACCAATGGCTTAAAGGAAGAGTGAAGGCTG 70
||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 148 AGCTAGTGAACATGGCAACGGGGGCTGAGAACCAATGGCTTAAAGGAAGAGTGAAGGCTG 207
Query 71 TTACCTCCGGAGACTGCTTAGTGATCACGGCTTTGAGCCACAACAGAGCTGGACCTCCAC 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 208 TTACCTCCGGAGACTGCTTAGTGATCACGGCTTTGAGCCACAACAGAGCTGGACCTCCAC 267
Query 131 CGGAAAAGACCATTACTTTATCTTCTCTTATGGCACCTAAGATGGCTCGCAGAGGAGGTA 190
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 268 CGGAAAAGACCATTACTTTTTCTTCTCTTATGGCACCTAAGATGGCTCGCAGAGGAGGTA 327
Query 191 TAGATGAGCCTTTTGCATGGGAAAGCAAGGAATTTTTGAGGAAACTTTGCATAGGAAAGG 250
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 328 TAGATGAGCCTTTTGCATGGGAAAGCAAAGAATTTTTGAGGAAACTTTGCATAGGAAAGG 387
Query 251 AGGTTGCATTCAAAGTTGATTACAAAGTGGAAGCTATTGCTGGAAGAGAATTTGGCTCTG 310
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 388 AGGTTGCATTCAAAGTGGATTACAAGGTGGAAGCTATTGCTGGAAGAGAATTTGGCTCTG 447
Query 311 TATTCCTTGGCAATGAGAATCTTGCTAAGCTTGTTGTTAAAAATGGTTGGGCAAAGGTTA 370
| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 448 TTTTCCTTGGCAACGAGAATCTTGCTAAGCTTGTTGTTAAAACTGGTTGGGCAAAGGTTA 507
Query 371 GGGAGCCAGGTCAGCAGAATCAGGATAAGGTTAGTCCTTACATTAAAGAGTTGCTACAGC 430
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 508 GGGAGCCAGGTCAGCAGAATCAGGACAAGGTTAGTCCTTACATTAAAGAGTTGCTACAGC 567
Query 431 TCGAAGAGCAGGCCAAGCAGGAAGGATATGGTCGTTGGAGCAAAGTTCCTGGTGCTGCTG 490
| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 568 TTGAAGAGCTGGCCAAGCAGGAAGGATATGGTCGTTGGAGCAAGGTTCCTGGTGCTGCTG 627
Query 491 AGGCATCTATCAGAAACCTTCCTCCTTCTGCCATTGGGGATTCTGCTGGCTTTGATGCCA 550
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 AGGCATCTATCAGAAATCTTCCTCCTTCTGCCATTGGGGATTCTGCTGGCTTTGATGCCA 687
Query 551 TGGGCCTTTTAGCTGCAAACAAGGGCAAGCCTATGGAAGGTATTGTGGAGCAAGTGCGTG 610
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 688 TGGGCCTTTTAGCTGCAAACAAGGGCAAGCCTATGGAAGGTATTGTAGAGCAAGTGCGTG 747
Query 611 ATGGAAGTACTATTCGGGTTTATCTTCTTCCAGAGTTCCAGTTTGTGCAAGTATTTGTTG 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 748 ATGGAAGTACTATTCGGGTTTATCTTCTTCCAGAGTTCCAGTTTGTGCAAGTATTTGTTG 807
Query 671 CGGGAGTTCAGGCTCCATCTATGGGAAGGCGAACCACAAATGGAAGTGTTGTTGAGACAG 730
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 808 CGGGAGTCCAGGCTCCATCAATGGGAAGGCGAACCACAAATGGAAGTGTTGTTGAGACAG 867
Query 731 TTCCAGATGAGCCGAATGGAGATGTTTCTGCTGAGTCACGAGGTCCTCTAACGTCAGCTC 790
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 868 TTCCAGATGAGCCGAATGGAGATGTTTCTGCTGAGTCACGAGGTCCTCTAACGACAGCTC 927
Query 791 AGAGACTTGCTGCCTCTGCAGCATCGTC--T-GAGGTTTCCTCTGATCCATTTGCAACTG 847
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 928 AGAGACTTGCTGCCTCTGCAGCATCGTCTGTCGAGGTTTCCTCTGATCCATTTGCAACTG 987
Query 848 AAGCCAAGTACTTTACCGAGCACCGTGTTCTTAGTAGAGATGTTCGCATTATTCTTGAAG 907
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 988 AAGCCAAGTACTTTACCGAACACCGTGTTCTTAGTAGAGATGTTCGCATTGTTCTTGAAG 1047
Query 908 GCGTTGACAAATTCAACAATCTGATTGGTTCAGTTCATTATTCTGATGGGGAAACAGTTA 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1048 GCGTTGACAAATTCAACAATCTGATTGGTTCAGTTCATTATTCTGATGGGGAAACAGTTA 1107
Query 968 AAGACTTGGGTTTGGAGCTCGTTGAAAATGGTCTTGCGAAATTTGTTGAATGGAGTGCTA 1027
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1108 AAGACTTGGGGTTGGAGCTCGTTGAAAATGGTCTTGCTAAATTTGTTGAATGGAGTGCCA 1167
Query 1028 ACATGATGGAGGATGAAGCTAAGAGAAAGTTGAAAGCTGCAGAACTTCAATGCAAGAAAG 1087
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1168 ACATGATGGAGGAGGAAGCTAAGAAAAAGTTGAAAGCTGCAGAACTTCAATGCAAGAAAG 1227
Query 1088 ATAAGGTTAAAATGTGGGGAAACTACGTTCCTCCAGCTACAAACTCGAAGGCAATTCATG 1147
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct 1228 ATAAGGTTAAAATGTGGGCAAACTACGTTCCTCCAGCTACAAACTCTAAGGCAATTCATG 1287
Query 1148 ACCAGAACTTTACGGGAAAGGTAGTGGAAGTGGTGAGTGGGGATTGTCTTATAGTTGCCG 1207
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1288 ACCAGAACTTTACGGGAAAGGTAGTGGAAGTGGTGAGTGGGGATTGTCTAATAGTTGCCG 1347
Query 1208 ATGATGCTATTCCATTTGGGAGTCCAGCGGCAGAGAGACGGGTCTGTCTTTCGAGTATCA 1267
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1348 ATGATGCTGTTCCATTTGGGAGTCCAGCAGCAGAGAGACGGGTCTGTCTTTCGAGTATCA 1407
Query 1268 GATCTCCCAAGATGGGCAACCCACGCCGAGAAGAGAAACCAGCTCCTTATGCTCGGGAAG 1327
||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1408 GATCTCCAAAAATGGGCAACCCACGTAGAGAAGAGAAACCAGCTCCTTATGCTCGGGAAG 1467
Query 1328 CAAGAGAATTTCTGAGACAACGGCTTATTGGCAAACAGGTTATTGTTCAAATGGAATACT 1387
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1468 CAAGAGAATTTCTGAGACAACGACTTATTGGCAAACAGGTTATTGTTCAAATGGAATATT 1527
Query 1388 CAAGGAAAGTCACCCAAGGAGATGGTCCTACCACATCTGGAGCTGCTAATAGGTTCATGG 1447
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1528 CAAGGAAAGTCACCCAAGGAGATGGTCCTACCACATCTGGAGCTGCTGATAGGTTCATGG 1587
Query 1448 ATTTTGGCTCAGTGTTCCTTCCATCTCCTGCCAAAGGCGATTCTGATGAAGTGGCTGCAT 1507
|||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||
Sbjct 1588 ATTTTGGCTCAGTGTTCCTTCCATCTGCTGCCAAAGCCGATTCTGATGAAGTGACTGCAC 1647
Query 1508 CATCTGCTGCAGCAATTAATGGCAGTCATCCGGTTGGTGTGAATATTGCTGAGCTCGTTC 1567
|| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 1648 CACCTGCTGCAGCAATTGCTGGCAGTCAGCCGGTTGGTGTGAATATTGCTGAGCTCGTTC 1707
Query 1568 TTGCCCGTGGTTTTGGAAATGTGGTTAGACATAGAGATTTTGAAGAGCGATCAAACCATT 1627
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1708 TTGTCCGTGGTTTTGGAAATGTGGTTAGACATAGAGATTTTGAAGAGCGATCAAACCATT 1767
Query 1628 ATGATGCTCTTCTGGCTGCTGAAGCTCGTTCTCTGTCTGGAAAGAAAGGAATCCATTCTG 1687
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 1768 ATGATGCTCTTCTGGCTGCTGAAGCTCGTGCTCTGGCTGGAAAGAAAGGAATCCATTCTG 1827
Query 1688 CAAAAGAATCTCCAGCCATGCACATCACAGACCTAACTGTGGCGGCAGCTAAGAAAGCTA 1747
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1828 CAAAAGAATCTCCAGCCATGCACATCACAGACCTAACTGTGTCGGCAGCTAAGAAAGCTA 1887
Query 1748 AAGATTTCCTGCCATCCTTGCAAAGAATCAGGAGAATACCCGCTGTTGTGGAATATGTCC 1807
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1888 AAGATTTCCTGCCATCCCTGCAAAGAATCAGGAGAATACCCGCTGTTGTGGAATATGTCC 1947
Query 1808 TCAGCGGACATCGGTTTAAGCTTTATATCCCAAAGATAACATGCAGCATTGCCTTTTCAT 1867
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 1948 TCAGCGGACATCGGTTTAAGCTTTATATCCCAAAGATAACATGTAGCATAGCCTTTTCAT 2007
Query 1868 TCTCTGGTGTCAGATGTCCTGGCCGTGGCGAACCTTATTCAGAAGAGGCTATCTCTGTAA 1927
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2008 TCTCTGGTGTCAGATGTCCTGGCCGTGGCGAACCTTATTCAGAAGAAGCTATCTCTGTAA 2067
Query 1928 TGAGACGGAGGATCATGCAGAGAGATGTTGAGATTGAAGTTGAAACCGTGGATAGAACCG 1987
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2068 TGAGACGTAGGATCATGCAGAGAGATGTTGAGATTGAAGTTGAAACCGTGGATAGAACCG 2127
Query 1988 GTACTTTCTTGGGATCCATGTGGGAGTCGAGGACGAATGTGGCAACAGTTCTGCTTGAAG 2047
||||||||||||||||||||||||| |||||||| || ||||| ||||||||||||||||
Sbjct 2128 GTACTTTCTTGGGATCCATGTGGGAATCGAGGACAAACGTGGCTACAGTTCTGCTTGAAG 2187
Query 2048 CTGGCTTAGCAAAAATGCAGACTAGCTTTGGTGCAGACAGGATCGCCGAAGCACATCTTC 2107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2188 CTGGCTTAGCAAAAATGCAGACTAGCTTTGGTGCAGACAGGATCGCCGAAGCACATCTTC 2247
Query 2108 TTGAACAGGCCGAGAGATCTGCTAAAAACCAGAAACTGAAGATTTGGGAAAACTATGTTG 2167
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2248 TTGAACAGGCAGAGAGATCTGCTAAAAACCAGAAACTGAAGATTTGGGAAAACTATGTTG 2307
Query 2168 AAGGAGAAGAAGTCTCAAACGGAAATACAAATACCGTAGAAACCAGGCAAAAGGAGATCT 2227
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||
Sbjct 2308 AAGGAGAAGAAGTCTCAAACGGAAATACTAACACCGTAGAAACCAGGCAAAAGGAGACCT 2367
Query 2228 TAAAGGTTGTTGTTACAGAAGTACTTGGAGGTGGTCGGTTCTATGTTCAATCTGCTGGAG 2287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2368 TAAAGGTTGTTGTTACAGAAGTACTTGGAGGTGGTCGGTTCTATGTTCAATCTGCTGGAG 2427
Query 2288 ATCAGAAAGTAGCTTCGATTCAGAACCAGCTTGCATCCTTGAGTATTAAAGACGCTCCCA 2347
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2428 ATCAGAAAATAGCTTCGATTCAGAACCAGCTTGCATCATTGAGTATTAAAGACGCTCCCA 2487
Query 2348 TTATCGGGTCCTTTAATCCAAAGAGAGGTGACATCGTCCTTGCACAGTTTAGCCTTGATA 2407
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2488 TTATCGGATCCTTTAATCCAAAGAGAGGTGACATCGTCCTTGCACAGTTTAGCCTTGATA 2547
Query 2408 ACTCCTGGAACCGTGCAATGATTGTGACTGCACCCCGAGCAGCGGTTCAATCCCCAGATG 2467
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2548 ACTCCTGGAACCGTGCAATGATTGTGACAGCACCCCGAGCAGCGGTTCAATCCCCAGATG 2607
Query 2468 AAAAATTCGAAGTGTTCTACATCGATTATGGAAACCAGGAGACAGTTCCATACAGCGCAA 2527
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2608 AAAAATTCGAAGTGTTCTACATCGATTATGGAAACCAAGAGACAGTTCCATACAGCGCAA 2667
Query 2528 TCAGACCAATAGACCCTTCGGTATCTGCAGCACCAGGGCTCGCTCAGCTCTGCAGACTTG 2587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2668 TCAGACCAATAGACCCTTCGGTATCTGCAGCACCAGGGCTCGCTCAGCTCTGCAGACTTG 2727
Query 2588 CCTACATAAAGGTTCCAAGCTTGGAAGAAGACTTTGGTGCTGAAGCCGGAGAGTATTTGC 2647
|||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||
Sbjct 2728 CCTACATAAAGGTTCCAAGCTTGGAAGACGACTTTGGTCCTGAAGCGGGAGAGTATTTGC 2787
Query 2648 ATACGGTAACGCTGGGTAGTGGTAAAGAGTTCAAAGCAGTGATAGAAGAAAGAGACACAT 2707
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2788 ATACTGTAACTCTGGGTAGTGGTAAAGAGTTCAAAGCAGTGATAGAAGAAAGAGACACAT 2847
Query 2708 CTGGAGGCAAAGTCAAAGGGCAAGGAACTGGAACTGAATTCGCTGTCACACTCATTGCTG 2767
||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||
Sbjct 2848 CTGGAGGCAAAGTCAAAGGGCAAGGCACTGGAACTGAATTCGTTGTCACTCTCATTGCTG 2907
Query 2768 TCGATGATGAGATCTCTGTAAACGCTGCAATGCTTCAGGAAGGAATAGCGAGAATGGAGA 2827
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2908 TTGATGATGAGATCTCTGTAAATGCTGCAATGCTTCAGGAAGGAATAGCGAGAATGGAGA 2967
Query 2828 AACGTAAGAAATGGGGGCACAAAGACAAACAAGCTGCTCTTGATGCTTTAGAGAAGTTCC 2887
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2968 AACGTCAGAAATGGGGGCACAAAGGCAAACAAGCTGCTCTTGATGCTTTAGAGAAGTTCC 3027
Query 2888 AAGAGGAAGCTCGCAAGTCGAGAATTGGAATCTGGCAGTACGGTGACATTGAGTCCGATG 2947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3028 AAGAGGAAGCTCGCAAGTCGAGAATTGGAATCTGGCAGTACGGTGACATTGAGTCCGATG 3087
Query 2948 ATGAGGACACTGGTCCGGCCAGAAAACCTGCTGGTGG 2984
||||||||||||||||||||||||| |||||||||||
Sbjct 3088 ATGAGGACACTGGTCCGGCCAGAAAGCCTGCTGGTGG 3124
> AT5G61780.1 | Symbols: Tudor2, AtTudor2, TSN2 | TUDOR-SN protein
2 | chr5:24821258-24826969 FORWARD LENGTH=3552
Length=3552
Score = 2854 bits (1545), Expect = 0.0
Identities = 2533/2996 (85%), Gaps = 123/2996 (4%)
Strand=Plus/Plus
Query 34 ACTGAGAACCAATGGCTTAAAGGAAGAGTGAAGGCTGTTACCTCCGGAGACTGCTTAGTG 93
||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||
Sbjct 285 ACTGAGAACCAGTGGCTCAAAGGGAGAGTGAAGGCTGTTACCTCCGGAGACTGCTTGGTG 344
Query 94 ATCACGGCTTTGAGCCACAACAGAGCTGGACCTCCACCGGAAAAGACCATTACT-TTATC 152
||||||||||||| ||||||||||||||| || || |||||||||||||| ||| || ||
Sbjct 345 ATCACGGCTTTGACCCACAACAGAGCTGGCCCACCTCCGGAAAAGACCATCACTCTT-TC 403
Query 153 TTCTCTTATGGCACCTAAGATGGCTCGCAGAGGAGGTATAGATGAGCCTTTTGCATGGGA 212
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 404 TTCTCTTATGGCTCCTAAGATGGCTCGCAGAGGAGGTATAGATGAGCCTTTTGCATGGGA 463
Query 213 AAGCAAGGAATTTTTGAGGAAACTTTGCATAGGAAAGGAGGTTGCATTCAAAGTTGATTA 272
||||| ||| ||| | ||||| |||||||| |||||||||||||| |||||||| |||||
Sbjct 464 AAGCAGGGAGTTTCTAAGGAAGCTTTGCATTGGAAAGGAGGTTGCTTTCAAAGTGGATTA 523
Query 273 CAAAGTGGAAGCTATTGCTGGAAGAGAATTTGGCTCTGTATT-CCTTGGCAATGAGAATC 331
|||||||||||| ||||| |||||||||||||||||||| || |||||| || || ||||
Sbjct 524 CAAAGTGGAAGCAATTGCCGGAAGAGAATTTGGCTCTGT-TTACCTTGGTAACGAAAATC 582
Query 332 TTGCTAAGCTTGTTGTTAAAAATGGTTGGGCAAAGGTTAG-GGAGCCAGGTCAGCAGAAT 390
|||| |||||||||||| ||||||| ||||||||||| || | ||||||||||||||||
Sbjct 583 TTGCGAAGCTTGTTGTTCAAAATGGCTGGGCAAAGGTCAGACG-GCCAGGTCAGCAGAAT 641
Query 391 CAGGATAAGGTTAGTCCTTACATTAAAGAGTTGCTACAGCTCGAAGAGCAGGC-CAAGCA 449
|||||||||||||||||||||||| ||| || |||||| ||||||||||| | ||||
Sbjct 642 CAGGATAAGGTTAGTCCTTACATTGCGGAGCTGGAACAGCTTGAAGAGCAGGCTC-AGCA 700
Query 450 GGAAGGATATGGTCGTTGGAGCAAAGTTCCTGGTGCTGCTGAGGCATCTATCAGAAACCT 509
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 701 GGAAGGATTTGGTCGTTGGAGCAAGGTTCCTGGTGCTGCTGAGGCATCTATCAGAAATCT 760
Query 510 TCCTCCTTCTGCCATTGGGGATTCT-GCTGGCTTTGATGCCATGGGCCTTTTAGCTGCAA 568
||||||||||||| |||| |||||| || |||||||||||||| |||||||| ||||
Sbjct 761 TCCTCCTTCTGCCGTTGGAGATTCTGGC-AATTTTGATGCCATGGGTCTTTTAGCCGCAA 819
Query 569 ACAAGGGCAAGCCTATGGAAGGTATTGTGGAGCAAGTGCGTGATGGAAGTACTATTCGGG 628
|| ||||| || |||||||||||||| |||||||| |||||||| || || |||||||
Sbjct 820 GTAAAGGCAAACCCATGGAAGGTATTGTTGAGCAAGTCCGTGATGGCAGCACCATTCGGG 879
Query 629 TTTATCTTCTTCCAGAGTTCCAGTTTGTGCAAGTATTTGTTGCGGGAGTTCAGGCTCCAT 688
||||||||||||| || || |||||||| |||||||||||||| ||| | ||||||||||
Sbjct 880 TTTATCTTCTTCCGGAATTTCAGTTTGTTCAAGTATTTGTTGCTGGACTCCAGGCTCCAT 939
Query 689 CTATGGGAAGGCGAACCA-CAA-A-TGGAAG-TGTTGTTGAGAC--A-GTTCCAGATGAG 741
| ||||||||| | || | ||| | |||| ||| ||||| | | ||| ||| |
Sbjct 940 CGATGGGAAGGAG-ACAATCAACACAAGAAGCTGTCGTTGATCCTGATGTTACAG--CAA 996
Query 742 C--CGAATGGAGATGTTTCTGCTGAGTCACGAGGTCCTCTAACGTCAGCTCAGAGACTTG 799
| |||||||||||| |||||||||| | || || |||||||| |||||||||||||||
Sbjct 997 CTTCGAATGGAGATGCTTCTGCTGAGACGCGTGGCCCTCTAACAACAGCTCAGAGACTTG 1056
Query 800 CTGCCTCTGCAGCATCGTC---TGAGGTTTCCTCTGATCCATTTGCAACT-GAAGCCAAG 855
||||||| ||||||||||| |||||||||||||||||| ||||||| | |||||||||
Sbjct 1057 CTGCCTCAGCAGCATCGTCTGTTGAGGTTTCCTCTGATCCGTTTGCAA-TGGAAGCCAAG 1115
Query 856 TACTTTACCGAGCACCGTGTTCTTAGTAGAGATGTTCGCATTATTCTTGAAGGCGTTGAC 915
|||||||| |||| ||||| |||| |||||||||||| ||| |||||||||||||||||
Sbjct 1116 TACTTTACTGAGCTTCGTGTGCTTAATAGAGATGTTCGTATTGTTCTTGAAGGCGTTGAC 1175
Query 916 AAATTCAACAATCTGATTGGTTCAGT-TCATTATTCTGATGGGGAAACAGTTAAAGACTT 974
|| ||||||||||||||||| ||||| | | ||||| |||||||| ||||||||||||||
Sbjct 1176 AAGTTCAACAATCTGATTGGGTCAGTAT-ACTATTCCGATGGGGATACAGTTAAAGACTT 1234
Query 975 GGGTTTGGAGCTCGTTGAAAATGGTCTTGCGAAATTTGTTGAATGGAGTGCTAACATGAT 1034
|||||||||||| ||||||||||||||||| || | ||||| |||||||| |||||| |
Sbjct 1235 GGGTTTGGAGCTGGTTGAAAATGGTCTTGCTAAGTACGTTGAGTGGAGTGCCAACATGTT 1294
Query 1035 GGAGGATGAAG-CTAAGAGAAAGTTGAAAGCTGCAGAACTTCAATGCAAGAAAGATAAGG 1093
||| || |||| | || ||||| ||||||||| |||||||||||||||||||| | ||
Sbjct 1295 GGATGAAGAAGCCAAAAAGAAA-TTGAAAGCTACAGAACTTCAATGCAAGAAAAACCGGG 1353
Query 1094 TTAAAATGTGGGGAAACTACGTTCCTCCAGCTA-CAAACTCGAAGGCAATTCATGACCAG 1152
| |||||||||| ||||||||| |||||||||| | ||||| ||||||||||||||||||
Sbjct 1354 TGAAAATGTGGGCAAACTACGTCCCTCCAGCTAGC-AACTCCAAGGCAATTCATGACCAG 1412
Query 1153 AACTTTACGGGAAAGGTAGTGGAAGTGGTGAGTGGGGATTGTCTTA-TAGTTGCCGATGA 1211
|| ||||| ||||||||||||||||| ||||| ||||| || |||| ||||||| |||||
Sbjct 1413 AATTTTACCGGAAAGGTAGTGGAAGTTGTGAGCGGGGACTG-CTTAGTAGTTGCTGATGA 1471
Query 1212 TGCTATTCCATTTGGGAGTCCAGCGGCAGAGAGAC-GGGTCTGTCTTTCGAGTATCAGAT 1270
| |||| ||||| ||||| ||| ||| ||| | | | || |||||||| |||||||| |
Sbjct 1472 TTCTATCCCATTCGGGAGCCCAATGGCGGAGCG-CAGAGTTTGTCTTTCCAGTATCAGGT 1530
Query 1271 CTCCCAAGATGGGCAACCCACGCCGAGAAGAGAAACCAGCTCCTTATGCTCGGGAAG-CA 1329
|||| || ||||| ||||||||| |||| |||||||| || |||||||| || |||| ||
Sbjct 1531 CTCCTAAAATGGGTAACCCACGCAGAGAGGAGAAACCTGCCCCTTATGCGCGCGAAGCCA 1590
Query 1330 AGAGAATTTCTGAGACAACGGCTTATTGGCAA-ACAGGTTATTGTTCAAATGGAATACTC 1388
|| || |||||||||||| |||||| || || |||||||||||||||||||||||||
Sbjct 1591 AG-GAGTTTCTGAGACAAAAGCTTATCGG-AATGGAGGTTATTGTTCAAATGGAATACTC 1648
Query 1389 AAGGAAAG-TCA-CCCAAGGAGATGGTCCTACCACATCTGGAGCTGCTAATAGGTTCATG 1446
|||| ||| | | ||| |||||||||| ||| || |||||||||| | ||||| |||||
Sbjct 1649 AAGG-AAGATTAGCCC-AGGAGATGGTGTTACTACTTCTGGAGCTGGTGATAGGGTCATG 1706
Query 1447 GATTTTGGCTCAGTGTTCCTTCCATCTCCTGCCAAAGGCGATTCTGATGAAGTGGCTGCA 1506
||||| |||||||||||||||||||||||| || |||| | |||| | ||||
Sbjct 1707 GATTTCGGCTCAGTGTTCCTTCCATCTCCTACC-AAGG-G----TGAT--A-CAGCTG-- 1755
Query 1507 TCATCTGCTGCAGCAATTAATGGCAGTCATCCGGTTGGTGTGAATATTGCTGAGCTCGTT 1566
| | | |||||||| | | | ||| ||| | |||||||||||| ||| ||
Sbjct 1756 T-AGCAGCTGCAGC-----A----A--C-TCC---TGGAGCGAATATTGCTGAACTCATT 1799
Query 1567 CTTGCCCGTGGTTTTGGAAATGTGGTTAGACATAGAGATTTTGAAGAGCGATCAAACCAT 1626
|| ||||||| || || | ||||||| ||||| | || ||||||||| | || ||||||
Sbjct 1800 ATTTCCCGTGGCTTAGGGACTGTGGTTCGACATCGTGACTTTGAAGAGAGGTCGAACCAT 1859
Query 1627 TATGATGCTCTTCTGGCTGCTGAAGCTCGTTCT-CTGTCTGGAAAGAAAGGA-ATCCATT 1684
||||| ||||| |||||||||||||||||| || || |||| ||| ||| | |||||||
Sbjct 1860 TATGACGCTCTCCTGGCTGCTGAAGCTCGTGCTATTG-CTGGGAAG-AAGAATATCCATT 1917
Query 1685 CTGCAAAAGAATCTCCAGCCATGCACATCACAGACCTAACTGTGGCGGCAGCTAAGAAAG 1744
||||||| || ||||||||| | ||||| ||||||| |||||||| | || ||||| |
Sbjct 1918 CTGCAAAGGATTCTCCAGCCCTACACATTGCAGACCTGACTGTGGCCTCGGCCAAGAAGG 1977
Query 1745 CTAAAGATTTCCTGCCATCCTTGCAAAGAATC-AGGAGAATACCCGCTGTTGTGGAATAT 1803
|||||||||||||||||||| |||| |||||| | || ||| | || ||||||||||||
Sbjct 1978 CTAAAGATTTCCTGCCATCCCTGCAGAGAATCAACCAG-ATATCTGCCGTTGTGGAATAT 2036
Query 1804 GTCCTCAGCGGACATCGGTTTAAGCTTTATA-TCCCAAAGATAACATGCAGCATTGCCTT 1862
|| || || ||||||||||| ||||| || | ||| ||||| | | ||||||||||||||
Sbjct 2037 GTGCTAAGTGGACATCGGTTCAAGCTATACATTCCAAAAGA-ATCGTGCAGCATTGCCTT 2095
Query 1863 TTCATTCTCTGGTGTCAGATGTCCTGGCCGTGGCGAACCTTATTCAGAAGAGGCTATCT- 1921
| ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |
Sbjct 2096 TGCATTCTCTGGTGTCAGATGTCCTGGCCGTGGCGAACCCTATTCGGAAGAAGCTAT-TG 2154
Query 1922 CTGTAATGAGACGGAGGATCATGCAGAGAGATGTTGAGATTGAAGTTGAAACCGTGGATA 1981
|| |||||||||| | |||||||||||||||||| ||||||| |||||||| |||||||
Sbjct 2155 CTTTAATGAGACGTAAGATCATGCAGAGAGATGTCGAGATTGTAGTTGAAAATGTGGATA 2214
Query 1982 GAACCGGTACTTTCTTGGGATCCATGTGGGAG------TCGAGGACGAATG-TGGCAACA 2034
|||||||||||||||||||||| ||||||||| || | |||||| | || ||||
Sbjct 2215 GAACCGGTACTTTCTTGGGATCAATGTGGGAGAAAAACTCAAAGACGAACGCAGG-AACA 2273
Query 2035 GT-TCTGCTTGAAGCTGGCTTAGCAAAAATGCAGACTAGCTTTGGTGCAGACAGGA-TCG 2092
| ||| |||||||||||| | ||||||||||||||| |||||||||||||||||| ||
Sbjct 2274 -TATCTTCTTGAAGCTGGCCTGGCAAAAATGCAGACTGGCTTTGGTGCAGACAGGATTC- 2331
Query 2093 CCGAAGCACATCTTCTTGAACA-GGCCGAGA-GATCTGCTAAAAACCAGAAACTGAAGAT 2150
||||||| ||| |||||||| | ||| || | ||||||||||||| ||||||||||||||
Sbjct 2332 CCGAAGCTCATATTCTTGAA-ATGGCAGA-ACGATCTGCTAAAAATCAGAAACTGAAGAT 2389
Query 2151 TTGGGAAAACTATGTTGAAGGAGAAGAAGTC-TCAAACGGAAATACAAATACCGTAGAAA 2209
|||||||||||||||||||||||| ||||| | |||||| | | | || | |||||||
Sbjct 2390 TTGGGAAAACTATGTTGAAGGAGAGGAAGTAGT-AAACGGTAGTTCTAA-A--GTAGAAA 2445
Query 2210 CCAGGCAAAAGGAGAT-CTTAAAGGTTGTTGTTACAGAAGTACTTGGAGGTGGTCGGTTC 2268
||||||| ||||| | || ||||||||||||||| |||||||||||||| ||||| |||
Sbjct 2446 CCAGGCAGAAGGAAACACT-AAAGGTTGTTGTTACGGAAGTACTTGGAGGCGGTCGTTTC 2504
Query 2269 TATGTTCA-ATCTGCTGGAGATCAGAAAGTAGCTTCGATTCAGAACCAGCTTGCATC-CT 2326
|||||||| | | | ||| ||||| ||||||||||||||||| |||||||||||| | ||
Sbjct 2505 TATGTTCAGA-CGGTTGGCGATCAAAAAGTAGCTTCGATTCAAAACCAGCTTGCAGCTCT 2563
Query 2327 TGAGTATTAAAGACGCTCCCATTATCGGGTCCTTTAATCCAAAGAGAGG-TGACATCGTC 2385
|||| ||||||||||||||||||| || || |||||||| |||| ||| ||||||||||
Sbjct 2564 -GAGTCTTAAAGACGCTCCCATTATTGGATCGTTTAATCCTAAGA-AGGGTGACATCGTC 2621
Query 2386 CTTGCACAGTTTAGCCTTGATAACTCCTGGAACCGTGCAATGATTGTGACTGCACCCCGA 2445
|||||||| |||||||| ||||||||||||||||| ||||||||||| | || ||| |||
Sbjct 2622 CTTGCACAATTTAGCCTCGATAACTCCTGGAACCGCGCAATGATTGTTAATGGACCTCGA 2681
Query 2446 GCAGCGGTTCAATCCCCAGATGAAAAATTCGAAGTGTTCTACATCGATTATGGAAACCAG 2505
| ||| |||||||| ||||| || |||| |||||||||||||||||||||||||||||
Sbjct 2682 GGAGCAGTTCAATCTCCAGAGGAGGAATTTGAAGTGTTCTACATCGATTATGGAAACCAA 2741
Query 2506 GAGACAGTTCCATACAGCGCAAT-CAGACCAATAGACCCTTCGGTATC-TGCAGCACCAG 2563
|| | |||||| ||||||||||| | | || | |||||||| ||||| | |||||||||
Sbjct 2742 GAAATAGTTCCGTACAGCGCAATAC-GCCCTGTGGACCCTTCAGTATCCT-CAGCACCAG 2799
Query 2564 GGCTCGCTCAGCTCTGCAGACTTGCCTACATAAAGGTTCCAAGCTTGGAAGAAGACTTTG 2623
|||| || |||||||||||||||||||||||||| |||||| || |||||| |||||||
Sbjct 2800 GGCTAGCACAGCTCTGCAGACTTGCCTACATAAAAGTTCCAGGCAAGGAAGAGGACTTTG 2859
Query 2624 GT-GCTGAAGCCGGAGAGTATTTGCATACGGTAACGCTGGGTAGTGGTAAAGAGTTCAAA 2682
|| | ||| |||||||||||||||||||| ||||| || | ||||||||||||||||
Sbjct 2860 GTCG-TGACGCCGGAGAGTATTTGCATACCGTAACACTCGAAAGTGGTAAAGAGTTCAGG 2918
Query 2683 GCAGTGATAGAAGAAAGAGACACATCTGGAGGCAAAGTCAAAGGGC-AAGGAACTGGAAC 2741
|||||| |||| |||||||| || || ||||||||||| || |||| |||||||||||||
Sbjct 2919 GCAGTGGTAGAGGAAAGAGATACTTCAGGAGGCAAAGTGAA-GGGCCAAGGAACTGGAAC 2977
Query 2742 TGAATTCGCTGTCACACTCATTGCTGTCGATGATGAGATCTCTGTAAACGCTGCAATGCT 2801
||| ||| ||| || ||||| ||||||||||||||||||||||| || || ||||||||
Sbjct 2978 TGAGCTCGTTGTAACTCTCATCGCTGTCGATGATGAGATCTCTGTCAATGCAGCAATGCT 3037
Query 2802 TCAGGAAGGAATAGCGAGAATGGAGAAACGTAAGAAATGGGGGCAC-AAAGACAAACAAG 2860
||||||||||||||| || ||||||||||| | || ||||| | | |||||||| ||||
Sbjct 3038 TCAGGAAGGAATAGCCAGGATGGAGAAACGCAGGAGATGGGAAC-CGAAAGACAAGCAAG 3096
Query 2861 CTGCTCTTGATGCT-TTAGAGAAGTTCCAAGAGGAAGCTCGCAAGTCGAGAATTGGAATC 2919
| |||||||||||| || |||||||||||||| ||||||||||| || || | ||||||
Sbjct 3097 CCGCTCTTGATGCTCTT-GAGAAGTTCCAAGACGAAGCTCGCAAATCTAGGACCGGAATC 3155
Query 2920 TGGCAGTACGGTGACATTGAGTCCGATGATGAGGACACTGGTCCGGCCAGAAAACC 2975
||| ||||||| || || | || ||||||||||||| || ||| | ||| |||||
Sbjct 3156 TGGGAGTACGGAGATATCCAATCTGATGATGAGGACAATGTTCCAGTCAGGAAACC 3211
> AT2G11271.1 | Symbols: | unknown protein; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:4485414-4485539
REVERSE LENGTH=126
Length=126
Score = 180 bits (97), Expect = 8e-44
Identities = 106/110 (96%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 35 CTG-AGAACCAATGGCTTAAAGGAAGAGTGAAGGCTGTTACCTCCGGAGACTGCTTAGTG 93
||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 110 CTGAAGAACTGATGGCTTAAAGGACGAGTGAAGGCTGTTACCTCCGGAGACTGCTTAGTG 51
Query 94 ATCACGGCTTTGAGCCACAACAGAGCTGGACCTCCACCGGAAAAGACCAT 143
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 50 ATCACGGCTTTGAGCCACAACAGAGCTGGACCTCCACCGGAAAAGACCAT 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149898825684
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5