BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg940431
Length=1682
Score E
Sequences producing significant alignments: (Bits) Value
AT5G09672.1 | Symbols: CPuORF21 | conserved peptide upstream op... 2468 0.0
AT5G09670.2 | Symbols: | loricrin-related | chr5:2995912-29989... 2468 0.0
AT5G64552.1 | Symbols: CPuORF22 | conserved peptide upstream op... 852 0.0
AT5G64550.1 | Symbols: | loricrin-related | chr5:25801528-2580... 852 0.0
> AT5G09672.1 | Symbols: CPuORF21 | conserved peptide upstream
open reading frame 21 | chr5:2995910-2998932 REVERSE LENGTH=2292
Length=2292
Score = 2468 bits (1336), Expect = 0.0
Identities = 1573/1686 (93%), Gaps = 21/1686 (1%)
Strand=Plus/Plus
Query 1 CATCTCTCTAATGCCGTTAATATGGGTGACACCGCTCTTAGCCTGAAGTGCCTTGGGGAC 60
||| |||||| |||| |||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 433 CAT-TCTCTAGTGCCATTAATATGGGTGACACCGCTCTTAGCCTGAAGTGTCTTGGGGGC 491
Query 61 TCTGAAAACCAATTTTGTTCCGATGTTTCTACTTTCACTGATGATGGCTGCCGGTTAGTC 120
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 492 TCTGAAAACCAATTTTGTTCCGATGTATCTAGTTTCACTGATGATGGCTGCCGGTTAGTC 551
Query 121 CTCGGATTAGGTCCAACGTCGGCTTCATACTGTTTTAGTGTCGGCGTTAATAACAGCAAC 180
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 552 CTCGGATTGGGTCCAACGTCGACTTCATACTGTTTTAGTGTCGGCGTTAATAACAGCAAC 611
Query 181 AAAGATTCTGCTTCTGGATTCAGTCAAGTACTCGCTGATTCAGTTCTGCAACTTGGTCGT 240
|||||||||||||||||||| | || | | |||||||||||||||||||||||||||
Sbjct 612 AAAGATTCTGCTTCTGGATTTACTC-A--A---GCTGATTCAGTTCTGCAACTTGGTCGT 665
Query 241 CCTGCTCCCCG-AGTTG-CTATCAAT-AATGG--TGGACAA----CGTGTGATCCCTGTT 291
|||||| | | | | | | | | | ||| | || || ||||||||||||||
Sbjct 666 CCTGCTGTAAGCA-TAGAC-A-CTTTCAGTGGACTTGATAATGGTGGTGTGATCCCTGTT 722
Query 292 GTTGATGAAGGTTCTTCTTCTGCAAAGAGATCAGGTGGATACATGCCATCACTTCTGTTA 351
|||||||||||||||||||| || |||||||||||||||||||||||||| ||| |||||
Sbjct 723 GTTGATGAAGGTTCTTCTTCAGCTAAGAGATCAGGTGGATACATGCCATCGCTTTTGTTA 782
Query 352 GATCCAACTGTTAGAAACCCTTCACAGATGCAACAACATAAAGATTTTGGAACCGGCATC 411
||||||| ||||| ||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct 783 GATCCAAATGTTAAAAACCCTTCACAGATTCAACAACTTAAAGATTTTGGAACCGGTATC 842
Query 412 CATTCACAAGTGAGCCTAGAACCATCACCGTACACAGCGTTATCTGTACAGCAGAGGACT 471
|||||||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct 843 CATTCACAAGTGAGCCAAGAACCATCACCTTACACAGAGTTCTATGTACAGCAGAGGACA 902
Query 472 AGCAATCCGAGGAAGTGTAAATTTATGGGATGTGTGAAAGGAGCCCGAGGCTCATCAGGG 531
|||||||||||||||||||||||||||||||||||||| ||||| ||||| | |||||
Sbjct 903 AGCAATCCGAGGAAGTGTAAATTTATGGGATGTGTGAAGGGAGCTCGAGGAGCGTCAGGA 962
Query 532 CTCTGCATTAGCCATGGTGGAGGCCAGAGATGCCAAAAACCAGGCTGCAACAAAGGTGCA 591
|||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCTGCATCAGCCATGGAGGAGGACAGAGATGCCAAAAACCAGGCTGCAACAAAGGTGCA 1022
Query 592 GAGAGTAAAACCACTTTTTGCAAAACCCATGGTGGAGGGAAGAGATGTGAACACTTGGGA 651
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1023 GAGAGTAAAACCACTTTTTGTAAAACCCATGGTGGAGGGAAGAGGTGTGAACACTTGGGA 1082
Query 652 TGCACGAAGAGTGCTGAAGGGAAAACAGATTTCTGCATATCTCATGGTGGTGGAAGACGT 711
||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1083 TGCACGAAGAGCGCCGAAGGTAAAACAGATTTCTGTATATCTCATGGTGGTGGAAGACGT 1142
Query 712 TGTGAGTTCCTCGAAGGATGTGACAAAGCAGCCCGTGGCAAATCGGGCCTCTGCATTAAA 771
|| |||||||| |||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1143 TGCGAGTTCCTTGAAGGATGTGACAAAGCAGCCCGTGGCAGGTCGGGCCTCTGCATCAAA 1202
Query 772 CACGGTGGTGGCAAAAGATGTAACATCGAAAG-CTGTACGCGGAGTGCTGAAGGACAAGC 830
||||||||||||||||||||||| |||| ||| |||||| || |||||||||||||||||
Sbjct 1203 CACGGTGGTGGCAAAAGATGTAATATCG-AAGACTGTACACGAAGTGCTGAAGGACAAGC 1261
Query 831 TGGTCTTTGCATATCCCATGGTGGTGGAAAACGTTGTCAGtttttttCAGGTTGTGAGAA 890
||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 1262 TGGTCTTTGTATATCCCATGGTGGTGGGAAACGTTGTCAGTATTTTTCAGGTTGTGAGAA 1321
Query 891 AGGAGCTCAAGGAAGTACAAACTACTGCAAAGCCCATGGAGGCGGAAAACGCTGCATATT 950
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1322 AGGAGCTCAAGGAAGTACTAACTACTGCAAAGCCCATGGAGGTGGAAAACGCTGCATATT 1381
Query 951 TTCAGGATGTAGCAAAGGAGCAGAAGGTAGTACTCCTCTGTGTAAAGCACACGGTGGTGG 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382 TTCAGGATGTAGCAAAGGAGCAGAAGGTAGTACTCCTCTGTGTAAAGCACACGGTGGTGG 1441
Query 1011 GAAACGCTGTCTGGCTGATGGAGGCGGGATTTGCTCTAAAAGCGTACATGGTGGGACTAA 1070
||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1442 AAAACGCTGTCTCGCTGATGGGGGTGGGATTTGCTCTAAAAGCGTACATGGTGGGACTAA 1501
Query 1071 CTTCTGTGTTGCTCATGGTGGTGGGAAAAGATGTGTTGTGGCGGGGTGTACAAAGAGTGC 1130
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 1502 CTTCTGTGTTGCTCATGGTGGGGGGAAAAGATGTGTTGTGGTGGGGTGTACAAAGAGTGC 1561
Query 1131 GCGTGGTCGCACTGACTGTTGTGTTAAACACGGTGGTGGAAAACGTTGCAAGATTGTCGA 1190
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| | ||
Sbjct 1562 GCGTGGTCGCACTGACAGTTGTGTTAAACATGGTGGTGGGAAACGTTGCAAGATTATTGA 1621
Query 1191 TTGTGAGAAGAGTGCTCAAGGTAGTACTGATTTCTGTAAAGCTCACGGTGGTGGGAAGCG 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1622 TTGTGAGAAGAGTGCTCAAGGTAGTACTGATTTCTGTAAAGCTCACGGTGGTGGGAAACG 1681
Query 1251 ATGTTCTTGGGGAGAAGGGAAATGTGAGAAATTCGCTAGAGGAAAGAGCGGTTTATGCGC 1310
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1682 ATGTTCTTGGGGAGATGGGAAATGTGAGAAATTTGCTAGAGGAAAGAGCGGTTTATGCGC 1741
Query 1311 TGCACATAACACTATTATGTCTCGAGAGAACGAAGGTGGAAGCAAGAGCGGTTTGATTGG 1370
||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||
Sbjct 1742 TGCGCATAACACTATTATGTCTCGGGAGAACAAAGATGGAAGCAAGAGCGGTTTGATTGG 1801
Query 1371 ACCGGGACTCTTTAGTGGCCTTGTTTTTGGCTCTACTTCTGATCATTCTCAGTCTGGAGT 1430
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1802 ACCGGGACTCTTTAGTGGCCTTGTTTTTGGCTCTACTTCTGATCATTCTCAGTCTGGAGC 1861
Query 1431 TAGCGCTGTCTCTGATTGCACCGATTCTGTTGATCGAACACAGTTTGAGAATAGGCAGAA 1490
|||||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||
Sbjct 1862 TAGCGCTGTCTCTGATTGTACTGATTCTGTTGAACGAATACAGTTTGAGAATAGGCAGAA 1921
Query 1491 GAATAAGAAGATGATGATACCGATGCAGGTTCTAGTACCTTCATCAATGAAATCTCCAAG 1550
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 GAACAAGAAGATGATGATACCGATGCAGGTTCTAGTACCTTCATCAATGAAATCTCCAAG 1981
Query 1551 TACTTCACATGAAGGAGAAACAAACATCTATGACTTCATGATTCCGGAGGAGAGAGTTCA 1610
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1982 TAATTCACATGAAGGAGAAACAAACATCTATGACTTCATGGTTCCGGAGGAGAGAGTTCA 2041
Query 1611 CGGCGGAGGGCTAATAATGTCTTTACTTGGTGGCTCCATTGATCGAAACTGAAAGCCATT 1670
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2042 CGGCGGTGGGCTAGTAATGTCTTTACTTGGTGGCTCCATTGATCGAAACTGAAAGCCATT 2101
Query 1671 TATGGT 1676
||||||
Sbjct 2102 TATGGT 2107
> AT5G09670.2 | Symbols: | loricrin-related | chr5:2995912-2998932
REVERSE LENGTH=2290
Length=2290
Score = 2468 bits (1336), Expect = 0.0
Identities = 1573/1686 (93%), Gaps = 21/1686 (1%)
Strand=Plus/Plus
Query 1 CATCTCTCTAATGCCGTTAATATGGGTGACACCGCTCTTAGCCTGAAGTGCCTTGGGGAC 60
||| |||||| |||| |||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 433 CAT-TCTCTAGTGCCATTAATATGGGTGACACCGCTCTTAGCCTGAAGTGTCTTGGGGGC 491
Query 61 TCTGAAAACCAATTTTGTTCCGATGTTTCTACTTTCACTGATGATGGCTGCCGGTTAGTC 120
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 492 TCTGAAAACCAATTTTGTTCCGATGTATCTAGTTTCACTGATGATGGCTGCCGGTTAGTC 551
Query 121 CTCGGATTAGGTCCAACGTCGGCTTCATACTGTTTTAGTGTCGGCGTTAATAACAGCAAC 180
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 552 CTCGGATTGGGTCCAACGTCGACTTCATACTGTTTTAGTGTCGGCGTTAATAACAGCAAC 611
Query 181 AAAGATTCTGCTTCTGGATTCAGTCAAGTACTCGCTGATTCAGTTCTGCAACTTGGTCGT 240
|||||||||||||||||||| | || | | |||||||||||||||||||||||||||
Sbjct 612 AAAGATTCTGCTTCTGGATTTACTC-A--A---GCTGATTCAGTTCTGCAACTTGGTCGT 665
Query 241 CCTGCTCCCCG-AGTTG-CTATCAAT-AATGG--TGGACAA----CGTGTGATCCCTGTT 291
|||||| | | | | | | | | | ||| | || || ||||||||||||||
Sbjct 666 CCTGCTGTAAGCA-TAGAC-A-CTTTCAGTGGACTTGATAATGGTGGTGTGATCCCTGTT 722
Query 292 GTTGATGAAGGTTCTTCTTCTGCAAAGAGATCAGGTGGATACATGCCATCACTTCTGTTA 351
|||||||||||||||||||| || |||||||||||||||||||||||||| ||| |||||
Sbjct 723 GTTGATGAAGGTTCTTCTTCAGCTAAGAGATCAGGTGGATACATGCCATCGCTTTTGTTA 782
Query 352 GATCCAACTGTTAGAAACCCTTCACAGATGCAACAACATAAAGATTTTGGAACCGGCATC 411
||||||| ||||| ||||||||||||||| ||||||| |||||||||||||||||| |||
Sbjct 783 GATCCAAATGTTAAAAACCCTTCACAGATTCAACAACTTAAAGATTTTGGAACCGGTATC 842
Query 412 CATTCACAAGTGAGCCTAGAACCATCACCGTACACAGCGTTATCTGTACAGCAGAGGACT 471
|||||||||||||||| |||||||||||| ||||||| ||| | |||||||||||||||
Sbjct 843 CATTCACAAGTGAGCCAAGAACCATCACCTTACACAGAGTTCTATGTACAGCAGAGGACA 902
Query 472 AGCAATCCGAGGAAGTGTAAATTTATGGGATGTGTGAAAGGAGCCCGAGGCTCATCAGGG 531
|||||||||||||||||||||||||||||||||||||| ||||| ||||| | |||||
Sbjct 903 AGCAATCCGAGGAAGTGTAAATTTATGGGATGTGTGAAGGGAGCTCGAGGAGCGTCAGGA 962
Query 532 CTCTGCATTAGCCATGGTGGAGGCCAGAGATGCCAAAAACCAGGCTGCAACAAAGGTGCA 591
|||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCTGCATCAGCCATGGAGGAGGACAGAGATGCCAAAAACCAGGCTGCAACAAAGGTGCA 1022
Query 592 GAGAGTAAAACCACTTTTTGCAAAACCCATGGTGGAGGGAAGAGATGTGAACACTTGGGA 651
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1023 GAGAGTAAAACCACTTTTTGTAAAACCCATGGTGGAGGGAAGAGGTGTGAACACTTGGGA 1082
Query 652 TGCACGAAGAGTGCTGAAGGGAAAACAGATTTCTGCATATCTCATGGTGGTGGAAGACGT 711
||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1083 TGCACGAAGAGCGCCGAAGGTAAAACAGATTTCTGTATATCTCATGGTGGTGGAAGACGT 1142
Query 712 TGTGAGTTCCTCGAAGGATGTGACAAAGCAGCCCGTGGCAAATCGGGCCTCTGCATTAAA 771
|| |||||||| |||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1143 TGCGAGTTCCTTGAAGGATGTGACAAAGCAGCCCGTGGCAGGTCGGGCCTCTGCATCAAA 1202
Query 772 CACGGTGGTGGCAAAAGATGTAACATCGAAAG-CTGTACGCGGAGTGCTGAAGGACAAGC 830
||||||||||||||||||||||| |||| ||| |||||| || |||||||||||||||||
Sbjct 1203 CACGGTGGTGGCAAAAGATGTAATATCG-AAGACTGTACACGAAGTGCTGAAGGACAAGC 1261
Query 831 TGGTCTTTGCATATCCCATGGTGGTGGAAAACGTTGTCAGtttttttCAGGTTGTGAGAA 890
||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 1262 TGGTCTTTGTATATCCCATGGTGGTGGGAAACGTTGTCAGTATTTTTCAGGTTGTGAGAA 1321
Query 891 AGGAGCTCAAGGAAGTACAAACTACTGCAAAGCCCATGGAGGCGGAAAACGCTGCATATT 950
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1322 AGGAGCTCAAGGAAGTACTAACTACTGCAAAGCCCATGGAGGTGGAAAACGCTGCATATT 1381
Query 951 TTCAGGATGTAGCAAAGGAGCAGAAGGTAGTACTCCTCTGTGTAAAGCACACGGTGGTGG 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382 TTCAGGATGTAGCAAAGGAGCAGAAGGTAGTACTCCTCTGTGTAAAGCACACGGTGGTGG 1441
Query 1011 GAAACGCTGTCTGGCTGATGGAGGCGGGATTTGCTCTAAAAGCGTACATGGTGGGACTAA 1070
||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1442 AAAACGCTGTCTCGCTGATGGGGGTGGGATTTGCTCTAAAAGCGTACATGGTGGGACTAA 1501
Query 1071 CTTCTGTGTTGCTCATGGTGGTGGGAAAAGATGTGTTGTGGCGGGGTGTACAAAGAGTGC 1130
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 1502 CTTCTGTGTTGCTCATGGTGGGGGGAAAAGATGTGTTGTGGTGGGGTGTACAAAGAGTGC 1561
Query 1131 GCGTGGTCGCACTGACTGTTGTGTTAAACACGGTGGTGGAAAACGTTGCAAGATTGTCGA 1190
|||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| | ||
Sbjct 1562 GCGTGGTCGCACTGACAGTTGTGTTAAACATGGTGGTGGGAAACGTTGCAAGATTATTGA 1621
Query 1191 TTGTGAGAAGAGTGCTCAAGGTAGTACTGATTTCTGTAAAGCTCACGGTGGTGGGAAGCG 1250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1622 TTGTGAGAAGAGTGCTCAAGGTAGTACTGATTTCTGTAAAGCTCACGGTGGTGGGAAACG 1681
Query 1251 ATGTTCTTGGGGAGAAGGGAAATGTGAGAAATTCGCTAGAGGAAAGAGCGGTTTATGCGC 1310
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1682 ATGTTCTTGGGGAGATGGGAAATGTGAGAAATTTGCTAGAGGAAAGAGCGGTTTATGCGC 1741
Query 1311 TGCACATAACACTATTATGTCTCGAGAGAACGAAGGTGGAAGCAAGAGCGGTTTGATTGG 1370
||| |||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||
Sbjct 1742 TGCGCATAACACTATTATGTCTCGGGAGAACAAAGATGGAAGCAAGAGCGGTTTGATTGG 1801
Query 1371 ACCGGGACTCTTTAGTGGCCTTGTTTTTGGCTCTACTTCTGATCATTCTCAGTCTGGAGT 1430
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1802 ACCGGGACTCTTTAGTGGCCTTGTTTTTGGCTCTACTTCTGATCATTCTCAGTCTGGAGC 1861
Query 1431 TAGCGCTGTCTCTGATTGCACCGATTCTGTTGATCGAACACAGTTTGAGAATAGGCAGAA 1490
|||||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||
Sbjct 1862 TAGCGCTGTCTCTGATTGTACTGATTCTGTTGAACGAATACAGTTTGAGAATAGGCAGAA 1921
Query 1491 GAATAAGAAGATGATGATACCGATGCAGGTTCTAGTACCTTCATCAATGAAATCTCCAAG 1550
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1922 GAACAAGAAGATGATGATACCGATGCAGGTTCTAGTACCTTCATCAATGAAATCTCCAAG 1981
Query 1551 TACTTCACATGAAGGAGAAACAAACATCTATGACTTCATGATTCCGGAGGAGAGAGTTCA 1610
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1982 TAATTCACATGAAGGAGAAACAAACATCTATGACTTCATGGTTCCGGAGGAGAGAGTTCA 2041
Query 1611 CGGCGGAGGGCTAATAATGTCTTTACTTGGTGGCTCCATTGATCGAAACTGAAAGCCATT 1670
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2042 CGGCGGTGGGCTAGTAATGTCTTTACTTGGTGGCTCCATTGATCGAAACTGAAAGCCATT 2101
Query 1671 TATGGT 1676
||||||
Sbjct 2102 TATGGT 2107
> AT5G64552.1 | Symbols: CPuORF22 | conserved peptide upstream
open reading frame 22 | chr5:25801528-25804980 REVERSE LENGTH=2533
Length=2533
Score = 852 bits (461), Expect = 0.0
Identities = 793/950 (83%), Gaps = 36/950 (4%)
Strand=Plus/Plus
Query 460 CAGCAGAGGACT-AGCAATCCGAGGAAGTGTAAATTTATGGGATGTGTGAAAGGAGCCCG 518
||||| |||| | ||||| |||| |||||| || |||||||||||||| |||||||| |
Sbjct 981 CAGCAAAGGA-TGAGCAACCCGAAGAAGTGCAAGTTTATGGGATGTGTTAAAGGAGCTAG 1039
Query 519 AGGCTCATCAGGGCTCTGCATTAGCCATGGTGGAGGCCAGAGATGCCAAAAACCAGGCTG 578
||| | || |||||||||||| ||||||| || ||||||||||||||||| | ||| ||
Sbjct 1040 AGGAGCTTCGGGGCTCTGCATTGGCCATGGAGGTGGCCAGAGATGCCAAAAGCTAGGTTG 1099
Query 579 CAACAAAGGTGCAGAGAGTAAAACCACTTTTTGCAAAACCCATGGTGGAGGGAAGAGATG 638
|||||||||||| ||||| ||||| ||||| |||||| ||||||| ||||| ||||||||
Sbjct 1100 CAACAAAGGTGCTGAGAGCAAAACTACTTTCTGCAAAGCCCATGGCGGAGGAAAGAGATG 1159
Query 639 TGAACACTTGGGATGCACGAAGAGTGCTGAAGGGAAAACAGATTTCTGCATATCTCATGG 698
|||||||||||||||| |||||||||||||| ||||| ||| |||||||||| |||||
Sbjct 1160 CCAACACTTGGGATGCACAAAGAGTGCTGAAGGCAAAACCGATCTCTGCATATCACATGG 1219
Query 699 TGGTGGAAGACGTTGT-GAGTT-CCTCGAAGGATGTGAC-AAAGCAGCCCGTGGCAAATC 755
|||||||||||| ||| || || ||| || ||||||| | || || || |||||||||||
Sbjct 1220 TGGTGGAAGACGGTGTGGA-TTCCCT-GAGGGATGTG-CTAAGGCTGCACGTGGCAAATC 1276
Query 756 -GGGCCTCTGCATTAAACACGGTGGTGGCAAAAGATGTAACATCGAAAGCTGTACGCGGA 814
||| |||||||| || ||||||||||| ||||| |||| || ||||||||||| || |
Sbjct 1277 TGGG-CTCTGCATCAAGCACGGTGGTGGTAAAAGGTGTAGGATTGAAAGCTGTACACGAA 1335
Query 815 GTGCTGAAGGACAAGCTGGTCTTTGCATATCCCATGGTGGTGGAAAACGTTGTCAGtttt 874
||||||| ||||||||||| || || || ||||| ||||||||| ||||||||| |
Sbjct 1336 GTGCTGAGGGACAAGCTGGACTCTGTATTTCCCACGGTGGTGGACGGCGTTGTCAG---T 1392
Query 875 tttCAGGTTGTGA-GAAAGGAGCTCAAGGAAGTACAAACTACTGCAAAGCCCATGGAGGC 933
|||||| ||| | ||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 1393 CTTCAGGCTGT-ACAAAAGGTGCTCAAGGAAGTACAAACTACTGCAAAGCTCATGGTGGT 1451
Query 934 GGAAAACGCTGCATATTTTCAGGATGTAGC-AAAGGAGCAGAAGGTAGTACTCCTCTGTG 992
|| ||||||||||||||| | ||||||| | |||||||| |||||||||||||| || ||
Sbjct 1452 GGGAAACGCTGCATATTTGCGGGATGTA-CAAAAGGAGCGGAAGGTAGTACTCCGCTTTG 1510
Query 993 TAAAGCACACGGTGGTGGGAAACGCTGTCTGGCTGATGGAGGCGGGATTTGCT-CTAAAA 1051
||||||||| ||||| || ||||||||| || |||||| || || ||||| | |||| |
Sbjct 1511 TAAAGCACATGGTGGAGGAAAACGCTGTATGTTTGATGGTGGTGGTATTTG-TCCTAAGA 1569
Query 1052 GCGTACATGGTGGGACTAACTTCTGTGTTGCTCATGGTGGTGGGAAAAGATGTGTTGTGG 1111
| || ||||||||||| | |||||||| ||||| ||||||||||| |||||||||||||
Sbjct 1570 GTGTGCATGGTGGGACGAGTTTCTGTGTAGCTCACGGTGGTGGGAAGAGATGTGTTGTGG 1629
Query 1112 CGGGGTGTACAAAGAGTGCGCGTGGTCGCACTGACTGTTGTGTTAAACACGGTGGTGGAA 1171
| ||||| || ||||| || ||||| | ||||| ||||| || || ||||||||||| |
Sbjct 1630 CCGGGTGCACTAAGAGCGCTCGTGGGAGGACTGATTGTTGCGTGAAGCACGGTGGTGGGA 1689
Query 1172 AACGTTGCAAGAT-TG-TCGATTGTGAGAAGAGTGCTCAAGGTAGTACTGATTTCTGTAA 1229
|||| || ||| | || | | ||||||||||||||| |||||||| ||||||||||||||
Sbjct 1690 AACGGTGTAAG-TCTGAT-GGTTGTGAGAAGAGTGCGCAAGGTAGCACTGATTTCTGTAA 1747
Query 1230 AGCTCACGGTGGTGGGAAGCGATGTTCTTGGGGA-GA-A-GGGAAATGTGAGAAATTCGC 1286
|| || ||||||||||| || || || |||||| || | ||||||| |||||||||||
Sbjct 1748 GGCACATGGTGGTGGGAAACGTTGCTCATGGGGAGGAGACTGGAAATGCGAGAAATTCGC 1807
Query 1287 TAGAGGAAAGAGCGGTTTATGCGCTGCACATAACACTATTATGTCTCGAGAGAACGAAGG 1346
||||||||||||||||||||||||||| ||||||| ||| ||| | ||| || | |
Sbjct 1808 TAGAGGAAAGAGCGGTTTATGCGCTGCGCATAACAGTAT---GTCACAAGATAA--A-GC 1861
Query 1347 TGGAAGCAAGAGC-GGTTTGATTGGACCGGGACTCTTTA-GTGGCCTTGT 1394
|||||||||| | |||||||||||||||||||| ||| ||||||||||
Sbjct 1862 TGGAAGCAAG-GTTGGTTTGATTGGACCGGGACT-TTTCCGTGGCCTTGT 1909
> AT5G64550.1 | Symbols: | loricrin-related | chr5:25801528-25804980
REVERSE LENGTH=2533
Length=2533
Score = 852 bits (461), Expect = 0.0
Identities = 793/950 (83%), Gaps = 36/950 (4%)
Strand=Plus/Plus
Query 460 CAGCAGAGGACT-AGCAATCCGAGGAAGTGTAAATTTATGGGATGTGTGAAAGGAGCCCG 518
||||| |||| | ||||| |||| |||||| || |||||||||||||| |||||||| |
Sbjct 981 CAGCAAAGGA-TGAGCAACCCGAAGAAGTGCAAGTTTATGGGATGTGTTAAAGGAGCTAG 1039
Query 519 AGGCTCATCAGGGCTCTGCATTAGCCATGGTGGAGGCCAGAGATGCCAAAAACCAGGCTG 578
||| | || |||||||||||| ||||||| || ||||||||||||||||| | ||| ||
Sbjct 1040 AGGAGCTTCGGGGCTCTGCATTGGCCATGGAGGTGGCCAGAGATGCCAAAAGCTAGGTTG 1099
Query 579 CAACAAAGGTGCAGAGAGTAAAACCACTTTTTGCAAAACCCATGGTGGAGGGAAGAGATG 638
|||||||||||| ||||| ||||| ||||| |||||| ||||||| ||||| ||||||||
Sbjct 1100 CAACAAAGGTGCTGAGAGCAAAACTACTTTCTGCAAAGCCCATGGCGGAGGAAAGAGATG 1159
Query 639 TGAACACTTGGGATGCACGAAGAGTGCTGAAGGGAAAACAGATTTCTGCATATCTCATGG 698
|||||||||||||||| |||||||||||||| ||||| ||| |||||||||| |||||
Sbjct 1160 CCAACACTTGGGATGCACAAAGAGTGCTGAAGGCAAAACCGATCTCTGCATATCACATGG 1219
Query 699 TGGTGGAAGACGTTGT-GAGTT-CCTCGAAGGATGTGAC-AAAGCAGCCCGTGGCAAATC 755
|||||||||||| ||| || || ||| || ||||||| | || || || |||||||||||
Sbjct 1220 TGGTGGAAGACGGTGTGGA-TTCCCT-GAGGGATGTG-CTAAGGCTGCACGTGGCAAATC 1276
Query 756 -GGGCCTCTGCATTAAACACGGTGGTGGCAAAAGATGTAACATCGAAAGCTGTACGCGGA 814
||| |||||||| || ||||||||||| ||||| |||| || ||||||||||| || |
Sbjct 1277 TGGG-CTCTGCATCAAGCACGGTGGTGGTAAAAGGTGTAGGATTGAAAGCTGTACACGAA 1335
Query 815 GTGCTGAAGGACAAGCTGGTCTTTGCATATCCCATGGTGGTGGAAAACGTTGTCAGtttt 874
||||||| ||||||||||| || || || ||||| ||||||||| ||||||||| |
Sbjct 1336 GTGCTGAGGGACAAGCTGGACTCTGTATTTCCCACGGTGGTGGACGGCGTTGTCAG---T 1392
Query 875 tttCAGGTTGTGA-GAAAGGAGCTCAAGGAAGTACAAACTACTGCAAAGCCCATGGAGGC 933
|||||| ||| | ||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 1393 CTTCAGGCTGT-ACAAAAGGTGCTCAAGGAAGTACAAACTACTGCAAAGCTCATGGTGGT 1451
Query 934 GGAAAACGCTGCATATTTTCAGGATGTAGC-AAAGGAGCAGAAGGTAGTACTCCTCTGTG 992
|| ||||||||||||||| | ||||||| | |||||||| |||||||||||||| || ||
Sbjct 1452 GGGAAACGCTGCATATTTGCGGGATGTA-CAAAAGGAGCGGAAGGTAGTACTCCGCTTTG 1510
Query 993 TAAAGCACACGGTGGTGGGAAACGCTGTCTGGCTGATGGAGGCGGGATTTGCT-CTAAAA 1051
||||||||| ||||| || ||||||||| || |||||| || || ||||| | |||| |
Sbjct 1511 TAAAGCACATGGTGGAGGAAAACGCTGTATGTTTGATGGTGGTGGTATTTG-TCCTAAGA 1569
Query 1052 GCGTACATGGTGGGACTAACTTCTGTGTTGCTCATGGTGGTGGGAAAAGATGTGTTGTGG 1111
| || ||||||||||| | |||||||| ||||| ||||||||||| |||||||||||||
Sbjct 1570 GTGTGCATGGTGGGACGAGTTTCTGTGTAGCTCACGGTGGTGGGAAGAGATGTGTTGTGG 1629
Query 1112 CGGGGTGTACAAAGAGTGCGCGTGGTCGCACTGACTGTTGTGTTAAACACGGTGGTGGAA 1171
| ||||| || ||||| || ||||| | ||||| ||||| || || ||||||||||| |
Sbjct 1630 CCGGGTGCACTAAGAGCGCTCGTGGGAGGACTGATTGTTGCGTGAAGCACGGTGGTGGGA 1689
Query 1172 AACGTTGCAAGAT-TG-TCGATTGTGAGAAGAGTGCTCAAGGTAGTACTGATTTCTGTAA 1229
|||| || ||| | || | | ||||||||||||||| |||||||| ||||||||||||||
Sbjct 1690 AACGGTGTAAG-TCTGAT-GGTTGTGAGAAGAGTGCGCAAGGTAGCACTGATTTCTGTAA 1747
Query 1230 AGCTCACGGTGGTGGGAAGCGATGTTCTTGGGGA-GA-A-GGGAAATGTGAGAAATTCGC 1286
|| || ||||||||||| || || || |||||| || | ||||||| |||||||||||
Sbjct 1748 GGCACATGGTGGTGGGAAACGTTGCTCATGGGGAGGAGACTGGAAATGCGAGAAATTCGC 1807
Query 1287 TAGAGGAAAGAGCGGTTTATGCGCTGCACATAACACTATTATGTCTCGAGAGAACGAAGG 1346
||||||||||||||||||||||||||| ||||||| ||| ||| | ||| || | |
Sbjct 1808 TAGAGGAAAGAGCGGTTTATGCGCTGCGCATAACAGTAT---GTCACAAGATAA--A-GC 1861
Query 1347 TGGAAGCAAGAGC-GGTTTGATTGGACCGGGACTCTTTA-GTGGCCTTGT 1394
|||||||||| | |||||||||||||||||||| ||| ||||||||||
Sbjct 1862 TGGAAGCAAG-GTTGGTTTGATTGGACCGGGACT-TTTCCGTGGCCTTGT 1909
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83132102520
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5