BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg940494 Length=1782 Score E Sequences producing significant alignments: (Bits) Value AT5G10240.1 | Symbols: ASN3 | asparagine synthetase 3 | chr5:32... 3033 0.0 AT5G65010.2 | Symbols: ASN2 | asparagine synthetase 2 | chr5:25... 1982 0.0 > AT5G10240.1 | Symbols: ASN3 | asparagine synthetase 3 | chr5:3212689-3216466 REVERSE LENGTH=2030 Length=2030 Score = 3033 bits (1642), Expect = 0.0 Identities = 1729/1772 (98%), Gaps = 2/1772 (0%) Strand=Plus/Plus Query 2 TCTCTTATTGCCGCCACCACCACCATGTGTGGGATTCTTGCTGTGTTAGGCTGCGTTGAT 61 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 25 TCTCTTATTGCCGCCACCACCACCATGTGTGGGATTCTCGCTGTGTTAGGCTGCGTCGAT 84 Query 62 AACTCTCAAGCTAAACGTTCCCGTATCATCGAACTCTCTCGCAGATTGAGGCATAGAGGT 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 85 AACTCTCAAGCTAAACGTTCCCGTATCATCGAACTCTCTCGCAGATTGAGGCATAGAGGT 144 Query 122 CCTGACTGGAGTGGGCTACATTGTTTTGAGGATTGTTATTTGGCTCATGAGCGTTTGGCT 181 |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct 145 CCTGACTGGAGTGGTCTACATTGTTATGAGGATTGTTATTTGGCTCATGAGCGTTTGGCT 204 Query 182 ATCGTTGACCCCACTTCTGGAGATCAACCACTCTATAACGAAGATAAGACCATTGCTGTC 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 205 ATCGTTGACCCCACTTCTGGAGATCAACCACTCTATAACGAAGATAAGACCATTGCTGTC 264 Query 242 ACGGTCAATGGAGAGATATACAACCACAAGGCTTTGCGTGAAAATCTGAAGTCTCACCAG 301 ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct 265 ACGGTCAATGGAGAGATTTACAACCACAAGGCTTTGCGTGAAAATTTGAAGTCTCACCAA 324 Query 302 TTTCGTACTGGGAGTGATTGTGAAGTGATTGCCCATCTTTATGAAGAACATGGAGAGGAA 361 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 325 TTCCGTACTGGGAGTGATTGTGAAGTGATTGCCCATCTTTACGAAGAACATGGAGAGGAA 384 Query 362 TTTGTCGACATGTTGGACGGCATGTTTGCATTTGTCCTTCTTGATTCCCGAGACAAAAGT 421 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| Sbjct 385 TTTGTCGACATGTTGGATGGCATGTTTGCATTTGTGCTTCTTGATACCCGAGACAAAAGC 444 Query 422 TTTATTGCTGCAAGGGATGCCATTGGTATCACTCCACTCTACATTGGGTGGGGTCTCGAT 481 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 445 TTTATTGCTGCAAGGGATGCCATTGGTATCACTCCACTCTACATCGGGTGGGGTCTCGAT 504 Query 482 GGTTCTGTCTGGTTTGCTTCGGAGATGAAAGCACTTAGTGATGATTGTGAACAGTTTATG 541 |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 505 GGTTCTGTTTGGTTTGCTTCCGAGATGAAAGCACTTAGTGATGATTGTGAGCAGTTTATG 564 Query 542 TGCTTCCCCCCAGGCCACATCTATTCAAGTAAACAAGGTGGGCTTAGGAGGTGGTACAAC 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 565 TGCTTCCCCCCAGGCCACATCTATTCAAGTAAACAAGGTGGGCTTAGGAGGTGGTACAAC 624 Query 602 CCCCCGTGGTTCTCTGA-GTTGGTTCCTTCAACCCCATATGATCCCCTATTGGTGCGCAA 660 ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| Sbjct 625 CCCCCGTGGTTCTCTGAGGTT-GTTCCTTCAACCCCATATGATCCCCTAGTGGTGCGCAA 683 Query 661 TACTTTTGAGAAGGCTGTTATAAAACGACTAATGACTGATGTGCCTTTTGGTGTCCTCCT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 684 TACTTTTGAGAAGGCTGTTATAAAACGACTAATGACTGATGTGCCTTTTGGTGTCCTCCT 743 Query 721 ATCTGGAGGATTAGACTCATCCCTTGTTGCTTCAGTAGCGTTACGCCATCTGGAAAAATC 780 |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 744 ATCTGGTGGATTAGATTCATCCCTTGTTGCTTCAGTAGCATTACGCCATCTGGAAAAATC 803 Query 781 AGAAGCTGCTTGTCAGTGGGGTTCAAAGTTGCACACATTTTGTATCGGTTTGAAGGGATC 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 804 AGAAGCTGCTTGTCAGTGGGGTTCAAAGTTGCACACATTTTGTATCGGTTTGAAGGGATC 863 Query 841 CCCGGATCTGAAAGCTGGCAGAGAAGTCGCTGACTATTTAGGAACTCGCCACCATGAGTT 900 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 864 CCCGGATCTTAAAGCTGGCAGAGAAGTCGCTGACTATTTAGGAACTCGCCACCACGAGTT 923 Query 901 ACACTTTACAGTCCAGGACGGAATAGATGCCATAGAAGAAGTCATATACCATGTTGAGAC 960 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 924 ACACTTTACAGTTCAGGACGGAATAGATGCCATAGAAGAAGTCATCTACCATGTTGAGAC 983 Query 961 CTATGACGTAACTACTATAAGAGCCAGCACTCCAATGTTTCTAATGTCGAGAAAAATCAA 1020 |||||| || |||||||| ||||||||||||||||||||||| |||||| |||||||||| Sbjct 984 CTATGATGTGACTACTATTAGAGCCAGCACTCCAATGTTTCTTATGTCGCGAAAAATCAA 1043 Query 1021 ATCGCTTGGTGTAAAGATGGTTCTTTCTGGGGAAGGCTCTGATGAAATTTTTGGAGGATA 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1044 ATCGCTTGGTGTAAAGATGGTTCTTTCTGGGGAAGGCTCTGATGAAATTTTTGGAGGATA 1103 Query 1081 TTTGTACTTCCATAAAGCACCCAACAAGAAGGAATTTCACGAGGAAACATGTCGAAAGAT 1140 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 1104 TTTGTACTTCCATAAAGCTCCCAACAAGAAGGAATTTCATGAGGAAACATGTCGAAAGAT 1163 Query 1141 CAAAGCTCTTCATCAATATGATTGCTTGAGAGCTAACAAATCAACTTCTGCATGGGGTGT 1200 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 1164 CAAAGCTCTTCATCAATATGACTGCTTGAGGGCTAACAAATCAACTTCTGCATGGGGTGT 1223 Query 1201 TGAGGCCCGTGTACCTTTCCTGGATAAAGAATTTATTAATGTCGCAATGAGCATCGATCC 1260 |||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1224 TGAGGCTCGTGTACCTTTCCTCGATAAAGAATTTATAAATGTCGCAATGAGCATCGATCC 1283 Query 1261 AGAGTGGAAGATGATTAGGCCTGATTTGGGAAGGATCGAGAAATGGGTGTTACGCAATGC 1320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1284 AGAGTGGAAGATGATTAGGCCTGATTTGGGAAGGATCGAGAAATGGGTGTTACGCAATGC 1343 Query 1321 CTTTGATGATGAGAAAAATCCTTACCTACCAAAGCACATTCTATATAGGCAGAAAGAACA 1380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1344 CTTTGATGATGAGAAAAATCCTTACCTACCAAAGCACATTCTATATAGGCAGAAAGAACA 1403 Query 1381 GTTCAGTGATGGAGTTGGATACAGCTGGATTGATGGTCTAAAAGAACATGCGAACAAACA 1440 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 1404 GTTCAGTGATGGAGTTGGATACAGCTGGATTGATGGTCTAAAAGATCATGCAAACAAACA 1463 Query 1441 TGTCTCTGACACAATGCTGATGAACGCAAGCTTTGTCTTCCCTGATAACACACCTTTGAC 1500 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1464 TGTCTCTGAGACAATGCTGATGAACGCAAGCTTTGTCTTCCCTGATAACACACCTTTGAC 1523 Query 1501 AAAAGAAGCTTACTACTACAGAACCATCTTTGAAAAGTTCTTCCCTAAGAGTGCTGCTAG 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1524 AAAAGAAGCTTACTACTACAGAACCATCTTTGAAAAGTTCTTCCCTAAGAGTGCTGCTAG 1583 Query 1561 AGCAACTGTACCAGGAGGTCCAAGTGTGGCATGTAGTACAGCAAAAGCTGTGGAATGGGA 1620 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1584 AGCAACTGTACCAGGAGGTCCAAGTGTGGCATGTAGCACAGCAAAAGCTGTGGAATGGGA 1643 Query 1621 CGCAGCTTGGTCACAGAATCTTGACCCATCAGGTCGTGCGGCTCTTGGAGTTCATGTTTC 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1644 CGCAGCTTGGTCACAGAATCTTGACCCATCAGGTCGTGCGGCTCTTGGAGTTCATGTTTC 1703 Query 1681 AGCTTATGGGGAAGATAAAACCGAAGATTCTCGTCCCGAGAAGCTACAGAAACTAGCAGA 1740 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1704 AGCTTATGGGGAAGATAAAACCGAAGATTCTCGTCCCGAGAAGCTACAGAAACTAGCAGA 1763 Query 1741 GAAGACTCCAGCCATTGTTTGAGGATAAACAA 1772 |||||||||||||||||||||||||||||||| Sbjct 1764 GAAGACTCCAGCCATTGTTTGAGGATAAACAA 1795 > AT5G65010.2 | Symbols: ASN2 | asparagine synthetase 2 | chr5:25969190-25972575 FORWARD LENGTH=2071 Length=2071 Score = 1982 bits (1073), Expect = 0.0 Identities = 1490/1692 (88%), Gaps = 25/1692 (1%) Strand=Plus/Plus Query 22 CACCATGTGTGGGATTCTTGCTG-TGTTAGGCTGCGTTGATAACTCTCAAGCTAAACGTT 80 ||| |||||||||||||| |||| | || || ||| | || ||||||||||||||||||| Sbjct 31 CACAATGTGTGGGATTCTCGCTGTTCTT-GGTTGCATCGACAACTCTCAAGCTAAACGTT 89 Query 81 CCCGTATCATCGAACTCTCTCGCAGATTGAGGCATAGAGGTCCTGACTGGAGTGGGCTAC 140 | |||||||||||||||||||||||||||||||| ||||||||||| |||||||| || | Sbjct 90 CTCGTATCATCGAACTCTCTCGCAGATTGAGGCACAGAGGTCCTGATTGGAGTGGACTCC 149 Query 141 ATTGTTTTGAGGATTGTTAT-TTGGCTCATGAGCGTTTGGCTATCGTTGACCCCACTTCT 199 |||||| ||| ||||||||| || || ||||||||||| || ||| ||||||| ||||| Sbjct 150 ATTGTTATGAAGATTGTTATCTT-GCCCATGAGCGTTTAGCCATCATTGACCCTACTTCA 208 Query 200 GGAGATCAACCACTCTATAACGAAGATAAGACCATTGCTGTCACGGTCAATGGAGAGATA 259 ||||| ||||| |||||||||||||| |||||| | |||||||| || |||||||||||| Sbjct 209 GGAGACCAACCTCTCTATAACGAAGACAAGACCGTCGCTGTCACTGTAAATGGAGAGATA 268 Query 260 TACAACCACAAGGCTTTGCGTGAAAATCTGAAGTCTCACCAGTTTCGTACTGGGAGTGAT 319 |||||||||||| |||||||||||| || |||||||| ||||| |||||||| ||||| Sbjct 269 TACAACCACAAGATTTTGCGTGAAAAGCTTAAGTCTCATCAGTTCCGTACTGGTAGTGAC 328 Query 320 TGTGAAGTGATTGCCCATCTTTATGAAGAACATGGAGAGGAATTTGTCGACATGTTGGAC 379 |||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 329 TGTGAAGTGATTGCACATCTTTACGAAGAACATGGAGAGGAATTTATCGACATGTTGGAT 388 Query 380 GGCATGTTTGCATTTGTCCTTCTTGATTCCCGAGACAAAAGTTTTATTGCTGCAAGGGAT 439 || ||||| || ||||||||||||||| | || |||||||||||||||||||||||||| Sbjct 389 GGAATGTTCGCGTTTGTCCTTCTTGATACTCGCGACAAAAGTTTTATTGCTGCAAGGGAC 448 Query 440 GCCATTGGTATCACTCCACTCTACATTGGGTGGGGTCTCGATGGTTCTGTCTGGTTTGCT 499 || ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct 449 GCTATTGGTATCACTCCACTTTACATTGGATGGGGTCTTGATGGTTCTGTCTGGTTTGCT 508 Query 500 TCGGAGATGAAAGCACTTAGTGATGATTGTGAACAGTTTATGTGCTTCCCC-CCAGGCCA 558 |||||||||||||| |||||||||||||||||||||||||||| ||| || || ||||| Sbjct 509 TCGGAGATGAAAGCGCTTAGTGATGATTGTGAACAGTTTATGT-CTTTTCCTCCTGGCCA 567 Query 559 CATCTATTCAAGTAAACAAGGTGGGCTTAGGAGGTGGTACAACCCCCCGTGGTTCTCTGA 618 |||||| |||||||||||||| |||||||||||||||||||| || ||||||| | ||| Sbjct 568 CATCTACTCAAGTAAACAAGGAGGGCTTAGGAGGTGGTACAATCCTCCGTGGTACAATGA 627 Query 619 GTTGGTTCCTTCAACCCCATATGATCCCCTA-TTGGTGCGCAATACTTTTGAGAAGGCTG 677 | |||||||||||||||||||||||| || || |||||||| |||| |||||||||| Sbjct 628 GCAGGTTCCTTCAACCCCATATGATCCTTTAGTTC-TGCGCAATGCTTTCGAGAAGGCTG 686 Query 678 TTATAAA-ACGACTAATGACTGATGTGCCTTTTGGTGTCCTCCTATCTGGAGGATTAGAC 736 | ||||| | |||| |||||||||||||||||||| || ||||||||||||||||| ||| Sbjct 687 TAATAAAGA-GACTTATGACTGATGTGCCTTTTGGAGTTCTCCTATCTGGAGGATTGGAC 745 Query 737 TCATCCCTTGTTGCTTCAGTAGCGTTACGCCATCTGGAAAAATCAGAAGCTGCTTGTCAG 796 || || || |||||| ||||||| ||||||||| |||||||||||||||||||| |||| Sbjct 746 TCGTCTCTCGTTGCTGCAGTAGCATTACGCCATTTGGAAAAATCAGAAGCTGCTCGTCAA 805 Query 797 TGGGGTTCA-AAGTTGCACACATTTTGTATCGGTTTGAAGGGATCCCCGGATCTGAAAGC 855 ||||||||| || |||||||| ||||| ||||||||| ||||||| || ||||| ||||| Sbjct 806 TGGGGTTCACAA-TTGCACACGTTTTGCATCGGTTTGCAGGGATCGCCAGATCTTAAAGC 864 Query 856 TGGCAGAGAAGTCGCTGACTAT-TTAGGAACTCGCCACCATGAGTTACACTTTACAGTCC 914 |||||||||||| ||||||||| || ||||| |||||||| ||||| || |||||||| | Sbjct 865 TGGCAGAGAAGTTGCTGACTATCTT-GGAACACGCCACCACGAGTTTCAGTTTACAGTTC 923 Query 915 AGGACGGAATAGATGCCATAGAAGAAGTCATATACCATGTTGAGACCTATGACGTAACTA 974 ||||||| ||||| || ||||| |||||||| |||||| ||||||| |||||||| |||| Sbjct 924 AGGACGGGATAGACGCGATAGAGGAAGTCATTTACCATATTGAGACTTATGACGTTACTA 983 Query 975 CTATAAGAGCCAGCACTCCAATGTTTCTAATGTCGAGAAAAATCAAATCGCTT-GGTGTA 1033 | |||||||| ||||| ||||||||||| ||||| |||||||| ||||| || |||||| Sbjct 984 CAATAAGAGCTAGCACCCCAATGTTTCTTATGTCCAGAAAAATTAAATCT-TTAGGTGTA 1042 Query 1034 AAGATGGTTCTTTCTGGGGAAGGCTCTGATGAAATTTTTGGAGGATATTTGTACTTCCAT 1093 ||||||||||||||||||||||| ||||||||||| | || ||||| |||||||||||| Sbjct 1043 AAGATGGTTCTTTCTGGGGAAGGTTCTGATGAAATACTGGGGGGATACTTGTACTTCCAT 1102 Query 1094 AAAGCACCCAACAAGAAGGAATTTCACGAGGAAACATGTCGAAAGATCAAAGCTCTTCAT 1153 || || ||||||||||| |||||||| || |||||||| ||||||||||||||||| || Sbjct 1103 AAGGCTCCCAACAAGAAAGAATTTCATGAAGAAACATGCCGAAAGATCAAAGCTCTCCAC 1162 Query 1154 CAATATGATTGCTTGAGAGCTAACAAATCAACTTCTGCATGGGGTGTTGAGGCCCGTGTA 1213 |||| |||||| |||||||||||||||||||||||||| |||||||| || || ||||| Sbjct 1163 CAATTTGATTGTTTGAGAGCTAACAAATCAACTTCTGCGTGGGGTGTCGAAGCTCGTGTG 1222 Query 1214 CCTTTCCTGGATAAAGAATTTATTAA-TGTCGCAATGAGCATCGATCCAGAGTGGAAGAT 1272 |||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||| | Sbjct 1223 CCTTTCCTAGATAAAGAATTT-TTAAATGTTGCAATGAGCATCGATCCAGAGTGGAAGTT 1281 Query 1273 GATTAGGCCTGATTTGGGAAGGATCGAGAAATGGGTGTTACGCAATGCCTTTGATGATGA 1332 ||| | ||||||| | |||||||||||||| |||||| |||||||||||||||||||||| Sbjct 1282 GATCAAGCCTGATCTCGGAAGGATCGAGAAGTGGGTGCTACGCAATGCCTTTGATGATGA 1341 Query 1333 -GAAAAATCCTTACCTACCAAAGCACATTCTATATAGGCAGAAAGAACAGTTCAGTGATG 1391 ||| | ||||| ||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 1342 AGAACGA-CCTTATCTACCAAAGCACATTCTATATAGACAGAAAGAACAGTTTAGTGATG 1400 Query 1392 GAGTTGGATACAGCTGGATTGATGGTCTAAAAGAACATGCGAACAAACATGTCTCTGACA 1451 ||||||| || |||||||| |||||||| ||||| ||||| || |||||||||||||| | Sbjct 1401 GAGTTGGGTATAGCTGGATAGATGGTCTGAAAGATCATGCAAATAAACATGTCTCTGATA 1460 Query 1452 CAATGCTGATGAA-CGCAAGCTTTGTCTTCCCTGATAACACACCTTTGACAAAAGAAGCT 1510 | |||||| | || |||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 1461 CTATGCTG-TCAAACGCAAGCTTTGTCTTCCCGGATAACACACCTCTGACAAAAGAAGCG 1519 Query 1511 TACTACTACAGAACCATCTTTGAAAAGTTCTTCCCTAAG-AG--TGCTGCTAGAGCAACT 1567 |||||||||||||||||||| || ||||||||||| ||| || |||||||||||| ||| Sbjct 1520 TACTACTACAGAACCATCTTCGAGAAGTTCTTCCCGAAGCAGAGTGCTGCTAGAGCGACT 1579 Query 1568 GTACCAGGAGGTCCAAGTGTGGCATGTAGTACAGCAAAAGCTGTGGAATGGGACGCAGCT 1627 |||||||||||||||||| | || || ||||| || |||||||| |||||||| ||| || Sbjct 1580 GTACCAGGAGGTCCAAGTATAGCTTGCAGTACCGCGAAAGCTGTAGAATGGGATGCAACT 1639 Query 1628 TGGTCACAGAATCTTGACCCATCAGGTCGTGCGGCTCTTGGAGTTCATGTTTCAGCTTAT 1687 |||||| |||||||||| || ||||| |||||||||||||||||||||||| |||||||| Sbjct 1640 TGGTCAAAGAATCTTGATCCGTCAGGCCGTGCGGCTCTTGGAGTTCATGTTGCAGCTTAT 1699 Query 1688 GGGGAAGATAAA 1699 | || |||||| Sbjct 1700 GAAGAGGATAAA 1711 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 88152157020 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5