BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg940682

Length=421
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G14240.1 | Symbols:  | Subtilase family protein | chr3:47414...   592    1e-168


> AT3G14240.1 | Symbols:  | Subtilase family protein | chr3:4741473-4744117 
REVERSE LENGTH=2645
Length=2645

 Score =  592 bits (320),  Expect = 1e-168
 Identities = 360/380 (95%), Gaps = 0/380 (0%)
 Strand=Plus/Plus

Query  1     ATGAAGCAACCAACGGGAAAATGAATGAAACGACTGAGTTTCGTTCTCCGCGTGACTCCG  60
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct  716   ATGAAGCAACCAACGGGAAAATGAATGAAACGACTGAGTTTCGCTCTCCGCGTGACTCCG  775

Query  61    ATGGACATGGGACTCACACAGCTTCAATCTCCGCCGGCCATTACGTTTTTCCGGCGTCAA  120
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct  776   ATGGACATGGGACTCACACAGCTTCAATCTCCGCCGGCCGTTACGTTTTTCCGGCGTCAA  835

Query  121   CTCTTGGCTATGCTCGCGGCATCGCTGCTGGGATGGCTCCGAAAGCTAGACTCGCCGCTT  180
             |||| ||||| |||| |||| ||||||||||||||||||| |||||||||||||||||||
Sbjct  836   CTCTCGGCTACGCTCACGGCGTCGCTGCTGGGATGGCTCCAAAAGCTAGACTCGCCGCTT  895

Query  181   ACAAAGTCTGTTGGAACTCCGGTTGTTACGACTCCGATATCTTAGCTGCTTTTGACACCA  240
             |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| 
Sbjct  896   ACAAAGTCTGTTGGAACTCCGGTTGTTACGACTCCGATATCTTAGCCGCTTTCGACACCG  955

Query  241   CCGTAGCCGACGGTGTCGATGTCATCTCTCTTTCCGTTGGAGGCGTCGTGGTTCCTTATT  300
             |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  956   CCGTTGCCGACGGTGTCGATGTCATCTCTCTCTCCGTTGGAGGCGTCGTGGTTCCTTATT  1015

Query  301   ACCTCGATGCCATCGCCATTGGAGCTTTCAGAGCTATTGACAGAGGGATATTCGTCTCTG  360
             |||| || || ||||| |||||||||||  |||||||||||||||| |||||||||||||
Sbjct  1016  ACCTAGACGCTATCGCTATTGGAGCTTTTGGAGCTATTGACAGAGGCATATTCGTCTCTG  1075

Query  361   CTTCCGCCGGAAACGGAGGT  380
             |||||||||| |||||||||
Sbjct  1076  CTTCCGCCGGTAACGGAGGT  1095



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 19956296353


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5