BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg940759

Length=281
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G12970.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB...   111    3e-24


> AT5G12970.1 | Symbols:  | Calcium-dependent lipid-binding (CaLB 
domain) plant phosphoribosyltransferase family protein | 
chr5:4102135-4105327 FORWARD LENGTH=2557
Length=2557

 Score =  111 bits (60),  Expect = 3e-24
 Identities = 67/70 (96%), Gaps = 2/70 (3%)
 Strand=Plus/Plus

Query  46    ATTGTAGG-GTACATGCTCGATGTTGACTCCCACATGTGGAGCATGAGGAGGAGTAAAGC  104
             ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  1857  ATTGT-GGAGTACATGCTCGATGTTGACTCCCATATGTGGAGCATGAGGAGGAGTAAAGC  1915

Query  105   TAACTTCTTC  114
             ||||||||||
Sbjct  1916  TAACTTCTTC  1925



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12918811493


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5