BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg940858 Length=678 Score E Sequences producing significant alignments: (Bits) Value AT5G13910.1 | Symbols: LEP | Integrase-type DNA-binding superfa... 1031 0.0 > AT5G13910.1 | Symbols: LEP | Integrase-type DNA-binding superfamily protein | chr5:4482450-4483085 REVERSE LENGTH=636 Length=636 Score = 1031 bits (558), Expect = 0.0 Identities = 610/636 (96%), Gaps = 0/636 (0%) Strand=Plus/Plus Query 23 ATGAACACAACATCGTCAAAGAGCAAGAAGAAGCAAGACGATCAAGTGGGTACAAGGTTT 82 |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| Sbjct 1 ATGAACACAACATCATCAAAGAGCAAGAAGAAGCAAGACGATCAGGTTGGTACAAGGTTT 60 Query 83 CTTGGGGTGAGAAGAAGGCCTTGGGGAAGATACGCAGCTGAGATAAGAGACCCAACTACG 142 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 61 CTTGGGGTGAGAAGAAGGCCTTGGGGAAGATACGCAGCTGAGATTAGAGACCCAACTACG 120 Query 143 AAGGAGCGTCACTGGCTTGGCACTTTTGATACGGCCGAAGAAGCTGCCTTGGCCTACGAT 202 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 121 AAGGAGCGTCACTGGCTTGGCACTTTCGATACGGCGGAAGAAGCTGCCTTGGCCTACGAT 180 Query 203 AGAGCCGCTCGGTCCATGCGTGGCACACGTGCCAGAACCAACTTTGTTTACTCAGACATG 262 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGAGCTGCTCGGTCCATGCGTGGCACACGTGCCAGAACCAACTTTGTTTACTCAGACATG 240 Query 263 cctccttcctcctccgtcacttccattgtttctcctgatgatccccctcctcctccacct 322 ||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||| Sbjct 241 CCTCCTTCCTCATCCGTCACCTCCATTGTTTCTCCTGACGATCCTCCTCCTCCTCCACCT 300 Query 323 cctcctgctcctcctAGCAATGATCCTGTCGATTACATGATGATGTTTAACCAATACTCA 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CCTCCTGCTCCTCCTAGCAATGATCCTGTCGATTACATGATGATGTTTAACCAATACTCA 360 Query 383 TCCACTGACTCGCCAATGCTTCAGCCTCATTGTGATCAAGTGGATAGTTACATGTTTGGT 442 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 361 TCCACTGACTCGCCAATGCTTCAGCCTCATTGTGATCAAGTGGACAGTTACATGTTTGGT 420 Query 443 GGCTCTCAATCTACTAATTCTTATTGTTATTCTAACAACAGTAGTAACGAGCTGCCTCCT 502 |||||||||||| | ||||||||||| |||||||| |||||||||| |||||||||||| Sbjct 421 GGCTCTCAATCTTCGAATTCTTATTGCTATTCTAATGACAGTAGTAATGAGCTGCCTCCT 480 Query 503 CTGCCGAGCGACTTGTCCAATTCGTGTTATATCCAACCACAGTGGACCTGGAGCGGTGAT 562 || |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||| Sbjct 481 CTCCCGAGCGACTTGTCGAATTCGTGTTATAGCCAACCACAGTGGACCTGGACCGGTGAC 540 Query 563 GACTACTCGGCTGAGTACGTACATAGTCCAATGTTCAGCAGAATGCCTCCGGTTTCTGAC 622 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GACTACTCGTCTGAGTACGTACATAGTCCAATGTTCAGCAGAATGCCTCCGGTTTCTGAC 600 Query 623 TCTTTCCCTCAAGGTTTCAACCACTTCGGCTCCTAA 658 ||||||||||||||||||||| |||| ||||||||| Sbjct 601 TCTTTCCCTCAAGGTTTCAACTACTTTGGCTCCTAA 636 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32802897991 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5