BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg940891 Length=322 Score E Sequences producing significant alignments: (Bits) Value AT2G38310.1 | Symbols: PYL4, RCAR10 | PYR1-like 4 | chr2:160500... 322 1e-87 > AT2G38310.1 | Symbols: PYL4, RCAR10 | PYR1-like 4 | chr2:16050063-16051168 FORWARD LENGTH=1106 Length=1106 Score = 322 bits (174), Expect = 1e-87 Identities = 205/220 (93%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 10 AGATTCCGATGATGATCGCGTCGTTCCAAAAACTTTTTCCTTCTCTCTCACGCGACCCCA 69 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||| Sbjct 241 AGATTCCGATGATGATCGCGTCGTTTCAAAAACGTTTTCCTTCTCTCTCACGCGACTCCA 300 Query 70 TGGCCGCTCGTTTTCACACACACGAGGTTGATCCTAACCAGTGTTGCTCTGCTGTTATTC 129 ||||||||||||||||||||||||||||| |||||| ||||||||||| || ||||||| Sbjct 301 CGGCCGCTCGTTTTCACACACACGAGGTTGGTCCTAATCAGTGTTGCTCCGCCGTTATTC 360 Query 130 ACGAGATCTCCGCTCTAATATCCACCGTTTGGTCTGTCGT-CTGCCGCTTTGATAACCCA 188 | ||||||||||||| ||| |||||||||||||| ||||| | ||||||||||||||||| Sbjct 361 AAGAGATCTCCGCTCCAATCTCCACCGTTTGGTCCGTCGTAC-GCCGCTTTGATAACCCA 419 Query 189 CAAGCTTACAAACACTTTCTCAAAAGCTGCAGCGTCATCG 228 ||||||||||||||||||||||||||||| |||||||||| Sbjct 420 CAAGCTTACAAACACTTTCTCAAAAGCTGTAGCGTCATCG 459 Score = 132 bits (71), Expect = 2e-30 Identities = 89/97 (92%), Gaps = 3/97 (3%) Strand=Plus/Plus Query 227 CGTCATTTTCTTGATTTTTAGCCATCGTGTGATCTATGtttttttCTGGTTTATGTGTG- 285 |||| |||||| ||||||||||| |||||||||||||| ||||||| || ||||||||| Sbjct 852 CGTCGTTTTCTAGATTTTTAGCCGTCGTGTGATCTATG-TTTTTTC-GGCTTATGTGTGA 909 Query 286 AAAAAATGTTACATTAGTGAATTAATCTCTCATGCAT 322 |||||| |||||||||||||||||||||||||||||| Sbjct 910 AAAAAAAGTTACATTAGTGAATTAATCTCTCATGCAT 946 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14979789202 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5