BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg940915

Length=258
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G14400.1 | Symbols: CYP724A1 | cytochrome P450, family 724, ...   159    8e-39


> AT5G14400.1 | Symbols: CYP724A1 | cytochrome P450, family 724, 
subfamily A, polypeptide 1 | chr5:4643521-4646382 FORWARD 
LENGTH=1263
Length=1263

 Score =  159 bits (86),  Expect = 8e-39
 Identities = 90/92 (98%), Gaps = 0/92 (0%)
 Strand=Plus/Plus

Query  145  GGATGGCCTTTCGTTGGAGAAACTATTTCTTTCTTCAAACCTCATAGATCAGACTCCATC  204
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    GGATGGCCTTTCATTGGAGAAACTATTTCTTTCTTCAAACCTCATAGATCAGACTCCATC  60

Query  205  GGCACATTCTTGCAACAACGTGTTTCACGGTA  236
            || |||||||||||||||||||||||||||||
Sbjct  61   GGTACATTCTTGCAACAACGTGTTTCACGGTA  92



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 11762653266


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5