BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941037 Length=1345 Score E Sequences producing significant alignments: (Bits) Value AT5G15510.2 | Symbols: | TPX2 (targeting protein for Xklp2) pr... 963 0.0 AT3G01015.1 | Symbols: | TPX2 (targeting protein for Xklp2) pr... 558 4e-158 > AT5G15510.2 | Symbols: | TPX2 (targeting protein for Xklp2) protein family | chr5:5034005-5036795 FORWARD LENGTH=1882 Length=1882 Score = 963 bits (521), Expect = 0.0 Identities = 559/578 (97%), Gaps = 0/578 (0%) Strand=Plus/Plus Query 612 GCTAAGAATCTGGGGTTAGACCCCAATGCTTCGATTTCTTCGTCCTGGGACAGCACCCGC 671 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 GCTAAGAATCTGGGTTTAGACCCCAATGCTTCGATTTCTTCGTCCTGGGACAGCACCCGT 955 Query 672 GGCAGTGTTTTGAGTGGAAGTTCAAATGCTGGCAGGAGAAGCAGAAGAAATAGCATGGAC 731 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 956 GGCAGTGTTTTGAGTGGAAGTTCAAATGCTGGCAGGAGAAGTAGAAGAAATAGCATGGAG 1015 Query 732 TCATCGACTACAATGGGAAGTAGAAGATCAAAGAAGAAGCAGGTTAAGGTCACTTCATTG 791 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1016 TCATCGACTACAATGGGAAGTAGAAGATCAAAGAAGAAGCAGGTTAAGGTCACTTCATTG 1075 Query 792 AAGCCGTTTAAGCTTAGAACTGAGCAAAGAGGTAAAATGAAAGAGGAAGAGTTTGCAAAA 851 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct 1076 AAGCCGTTTAAGCTTAGAACTGAGCAAAGAGGTAAAGTGAAAGAGGAAGAGTTAGCAAAA 1135 Query 852 AAGATTCATGAAATAACGTTGGAGGAAGAAAAGATGAGAATCCCCATTGCTCAAGGTCTT 911 ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1136 AAGATACACGAAATAACAATGGAGGAAGAAAAGATGAGAATCCCCATTGCTCAAGGTCTT 1195 Query 912 CCGTGGACAACCGATGAACCTGAGTGTCTAGTTAAGCCTCATTGGAAAGATATAACTAGA 971 || ||||||||||||||||||||||| ||||| ||||||||||||||||| || || ||| Sbjct 1196 CCATGGACAACCGATGAACCTGAGTGCCTAGTGAAGCCTCATTGGAAAGACATTACAAGA 1255 Query 972 CCAGTCGACTTGACGCTTCACTCAGATGTCCGGGCAGTTGAACGCGCAGAATTTGATTAC 1031 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1256 CCAGTCGACTTGACGCTCCACTCAGATGTCCGGGCAGTTGAACGCGCAGAATTTGATTAC 1315 Query 1032 CAGGTTGCCGAGAAGATGAGCTTCATTGAGCAATACAAAATGGAAAGAGAAAGACAACAG 1091 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 CAGGTTGCCGAGAAGATGAGCTTCATTGAGCAATACAAAATGGAAAGAGAAAGACAACAG 1375 Query 1092 AAGTTGGCAGAGGAAGAAGAGATAAAAAGGCTGAGGAAAGAATTGGTCCCCAAAGCACAA 1151 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 1376 AAGTTGGCAGAGGAAGAAGAGATAAGAAGGCTGAGGAAAGAATTGGTCCCAAAAGCACAA 1435 Query 1152 CCAATGCCATACTTTGATCGACCATTCATTCCAAGAAG 1189 |||||||||||||||||||||||||||||||||||||| Sbjct 1436 CCAATGCCATACTTTGATCGACCATTCATTCCAAGAAG 1473 Score = 771 bits (417), Expect = 0.0 Identities = 548/610 (90%), Gaps = 13/610 (2%) Strand=Plus/Plus Query 12 TTATCTTCGATGGAGTCGTTGACTTTGAAGAATGGGAAACCAGTGACTCCGGTGAAGGAT 71 ||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||| Sbjct 107 TTATCTTCGATGGAGTCGTTGACATTGAAGAATGGGAAAGCAGGGACTCCGGTGAAGGAT 166 Query 72 CGGAGCAAGTTTCAGTCCAAGGTTCAAGAGAATTCCAGATCGTCGGAGAATGCAAACCCT 131 |||||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||| Sbjct 167 CGGAGCAAGTTTCAGTCCAA---TCAAAAGATTTCCAGATCATCGGAGAATGCAAACCCT 223 Query 132 AACATTTCACACGCGAGTCCGGCTAAATCTCCGCTCACGAAATCTGCGAAGAAATCGGCG 191 ||||||||||| |||||||| ||||||| ||||||| |||||||||||||||||| ||| Sbjct 224 AACATTTCACAAGCGAGTCCTTCTAAATCACCGCTCATGAAATCTGCGAAGAAATCAGCG 283 Query 192 CAGAAGAATCAGAGTCCAAACCCTAAAAAACCTAGTCAGGCGGTTTCCTCTCCCCGGAAT 251 |||||||||| |||||| | |||| ||||||| |||||||||| ||||||||||||| Sbjct 284 CAGAAGAATCCGAGTCCGAGCCCT---AAACCTACCCAGGCGGTTTTCTCTCCCCGGAAT 340 Query 252 CGGATCAGAGAGAGGAAGTTTGTTGTGGTGGCGAAGAAGAATTCGAGGAAAGGGAAGAAG 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 341 CGGATCAGAGAGAGGAAGTTTGTTGTGGTGGCGAAGAAGAATTCGAGGAAAGGGAAGAAG 400 Query 312 GATCCAGCGGTTACAGAATCGAAAGTTGCTGAGATAGATTGTAAATGCGGGGAGAGGAAG 371 || |||||| |||||||||| || | ||||||||||||||||||||||| ||||||||| Sbjct 401 GAGCCAGCGATTACAGAATCCAAGGCAGCTGAGATAGATTGTAAATGCGGAGAGAGGAAG 460 Query 372 AAGGGGAACATGAAGTGTGTTTGTGTTGCATATGAAACTCTGCGTGCTTCGCAAGAGGAG 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 461 AAGGGGAACATGAAGTGTGTTTGTGTTGCATATGAAACTCTGCGTGCTTCGCAAGAGGAG 520 Query 432 TTCTTCAAAAATCGAATTCAATCAGAGGAGGAAAAGGGAAA-TTTGGAGGAATGTTGTAA 490 |||||||||||||||||| ||||||||||||| |||| || |||||||||||| ||||| Sbjct 521 TTCTTCAAAAATCGAATTGAATCAGAGGAGGATAAGG-AAGCTTTGGAGGAATGCTGTAA 579 Query 491 TCTCGGACAAAAT-GTTGGA---GATGGAGGAGGATCCGGGGAACCGGAGAACATAGGCG 546 ||||||| || | || | || ||| || ||| || ||||||||||| | ||||| Sbjct 580 TCTCGGA-AATGGCGATGAACTAGAAGGAAAAGAATCTGGAGAACCGGAGAAAACAGGCG 638 Query 547 CTTCTACAATGAAGAGGTCAAGGGCTAAGGTGGTTGAAGAAGCACGGCAAAGTGTGGCTG 606 ||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct 639 TTTCCACAATGAAGAGATCAAGAGCTAAGGTGGTGGAAGAAGCACGGCAAAGTGTGCCTG 698 Query 607 TATCTGCTAA 616 |||||| ||| Sbjct 699 TATCTGGTAA 708 Score = 267 bits (144), Expect = 3e-70 Identities = 154/159 (97%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 1187 AAGGTCGAGCAAACATCCAACTGCACCACAAGATCCCAAGTTCCACATACCGCAACACAA 1246 ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 1563 AAGGTCGAGCAAACATCCAACTGCACCACGAGATCCCAAGTTTCACATACCGCAACACAA 1622 Query 1247 GAAGATCAGATGCTGCAGTTCATCTTCTTGGAGTGAAGCTGGCTCCTGCATGAGCGATTT 1306 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1623 GAAGATCAGATGCTGCAGTTCATCTTCTTGGAGTGAAACTGGCTCCTGCATGAGCGATTT 1682 Query 1307 CCAATATCAGTTTCTCTAAAAAGCTTCTTTTGGGTTTAC 1345 |||||||||||||||||| |||||||||||||| ||||| Sbjct 1683 CCAATATCAGTTTCTCTAGAAAGCTTCTTTTGGATTTAC 1721 > AT3G01015.1 | Symbols: | TPX2 (targeting protein for Xklp2) protein family | chr3:1653-4159 REVERSE LENGTH=1754 Length=1754 Score = 558 bits (302), Expect = 4e-158 Identities = 516/619 (83%), Gaps = 16/619 (3%) Strand=Plus/Plus Query 693 TCAAATGCTGGCAGGAGAAGCAGAAGAAATAGCATGGACTCATC-GACTACAATGGGAAG 751 ||||||| |||| |||| |||||||||||||| | || || || | || |||||||||| Sbjct 974 TCAAATGGTGGCCGGAGGGGCAGAAGAAATAGCTTCGAATCCTCTG-CTTCAATGGGAAG 1032 Query 752 TAGAAGATCAAAGAAGAAGCAGGTTAAGGTCACTTCAT-TGAAGCCGTTTAAGCTTAGAA 810 ||||||||||| |||||||||| | || |||||||| | ||||||| ||||| || |||| Sbjct 1033 TAGAAGATCAACGAAGAAGCAGATCAAAGTCACTTC-TCTGAAGCCATTTAAACTCAGAA 1091 Query 811 CTGAGCAAAGAGGTA-AAATGAAAGAGGAAGAGTTTGCAAAAAAGATTCATGAAATAACG 869 ||||| || | || | ||||||||| |||||||||||||| ||| | || || || ||| Sbjct 1092 CTGAGGAACG-GGGACGAATGAAAGAAGAAGAGTTTGCAAAGAAGCTACACGAGATGACG 1150 Query 870 TTGGAGGAAG-AAAAGATGAGAATCCCCATTGCTCAAGGTCTTCCGTGGACAACCGATGA 928 |||||| ||| |||| | |||||||||||| |||||||||||||| |||||||| ||||| Sbjct 1151 TTGGAGAAAGCAAAA-AAGAGAATCCCCATAGCTCAAGGTCTTCCCTGGACAACTGATGA 1209 Query 929 ACCTGAGTGTCTAGTTAAGCCTCATTG-GAAAGATATAACTAGACCAGTCGACTTGACGC 987 ||||||| ||| ||||||||||| || ||||||||| || | |||||| ||||| | || Sbjct 1210 ACCTGAGAATCTGGTTAAGCCTCA-TGTGAAAGATATCACGATACCAGTAGACTTAAAGC 1268 Query 988 TTCACTCAGATGTCCGGGCAGTTGAACGCGCAGAATTTGATTACCAGGTTGCCGAGAAGA 1047 | || || || | || ||||| ||||| ||||||||||||||||||||| | ||||| | Sbjct 1269 TCCATTCCGACATTCGAGCAGTAGAACGTGCAGAATTTGATTACCAGGTTACTGAGAAAA 1328 Query 1048 TGAGCTTCA-TTGAGCAATACAAAATGGAAAGAGAAAGACAACAGAAGTTGGCAGAGGAA 1106 | | | | | | ||||||||||||| ||||||||| | ||||| ||| | ||||| ||| Sbjct 1329 TAAACCT-AGTCGAGCAATACAAAACAGAAAGAGAACGCCAACAAAAGCTAGCAGAAGAA 1387 Query 1107 GAAGAGATAAAAAGGCTGAGGAAAGAATTGGTCCCCAAAGCACAACCAATGCCATACTTT 1166 ||||||||| ||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct 1388 GAAGAGATACGAAGGCTGAGGAAAGAGTTGGTCCCTAAGGCACAACCAATGCCATACTTT 1447 Query 1167 GATCGACCATTCATTCC-AAGAAGGTCGAGCAAACATCCAACTGCACCACAAGATCCCAA 1225 ||||||||||||||||| || |||||||| ||| || || || | ||| | ||||||||| Sbjct 1448 GATCGACCATTCATTCCCAA-AAGGTCGAACAAGCACCCGACGGTACCTCGAGATCCCAA 1506 Query 1226 GTTCCACATACCGCAACACAAGAAGATCAGATGCTGCAGTTCATCTTCTTGGAGTGA-AG 1284 ||| | |||||||||||||||||||| |||||||||||| |||| ||||||||||| | Sbjct 1507 GTTTAATATACCGCAACACAAGAAGATAAGATGCTGCAGTACATCGTCTTGGAGTGACA- 1565 Query 1285 CTGGCTCCTGCATGAGCGA 1303 |||| || | ||||||||| Sbjct 1566 CTGGATCTTACATGAGCGA 1584 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66214518855 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5