BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941190 Length=1573 Score E Sequences producing significant alignments: (Bits) Value AT5G16890.1 | Symbols: | Exostosin family protein | chr5:55516... 2374 0.0 > AT5G16890.1 | Symbols: | Exostosin family protein | chr5:5551629-5554917 FORWARD LENGTH=1747 Length=1747 Score = 2374 bits (1285), Expect = 0.0 Identities = 1481/1576 (94%), Gaps = 11/1576 (1%) Strand=Plus/Plus Query 1 TCGAATAATCAGATCTCGCAATGTTTGGGAAACAGCAAAATCATCGTTCTACTTCTTGCA 60 ||||| || |||||||| |||||| ||| |||||||||||||||||||||||||| | || Sbjct 16 TCGAAGAAGCAGATCTCACAATGTCTGGAAAACAGCAAAATCATCGTTCTACTTCCTCCA 75 Query 61 GACCCAGATCCAAAACCCTAATCATCAT---ttctctcttctccgtctctctactgggca 117 ||||||||||||||||||||||| |||| ||||||||| ||||||||||||| | || Sbjct 76 GACCCAGATCCAAAACCCTAATCCTCATCGGCTCTCTCTTCACCGTCTCTCTACTCGTCA 135 Query 118 tcctctacaccttc-tcttcctcctccCGACCCTCAATCTCCAA-CCTGAACCCGTCGGA 175 ||||||||||| || ||||||||||||||| |||| |||||||| || ||||||||||| Sbjct 136 TCCTCTACACC-TCTTCTTCCTCCTCCCGAGCCTCCATCTCCAATCC-CAACCCGTCGGA 193 Query 176 CCAACCAGAGACGTCCTTCGTTACCTCGCTGGAGCATTTCTTAATCCAGAAAGCTCCGAA 235 || ||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| Sbjct 194 CCGACCAGAGACGTCCTTCGTTACCTCGCTTGAGCATTTCTTAATATATAAAGCTCCGAA 253 Query 236 GCTCTCGTTACCGGTTAGAGACGACACGGTGCGTGGCGAGAGTGATGATGATGCGAGGAA 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 254 GCTCTCGTTACCGGTTAGAGACGACACGGTGCGTGGCGAGAGTGATGATGATGTGAGGAA 313 Query 296 GCTCGATGAGATGGTTTTTGAGAGAGAGAATCGGTGGTTGAACGAAGATCCGGGATATCC 355 ||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| Sbjct 314 GCTCGATGAGATGGTGTTCGAGAGAGAGAATCGTTGGTTGAACGAAGATCCGGGATATCC 373 Query 356 TGTTGGGTTTCCGATTAAGGTTTACGTGTATGAGATGCCGAAGAAGTTTACTTTCGATCT 415 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 374 TGTTGAATTTCCGATTAAGGTTTACGTGTATGAGATGCCGAAGAAGTTTACTTTCGATCT 433 Query 416 TCTCTGGTTATTTCACAATACTTACAAAGAGACTTCGAATGCTACCTCTAATGGTAGCCC 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 434 TCTCTGGTTATTTCACAATACTTACAAAGAGACTTCGAATGCTACCTCTAATGGTAGCCC 493 Query 476 TGTGCATCGTCTAATCGAACAGCATTCTATTGACTATTGGCTCTGGGCTGATCTGATCTC 535 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 494 TGTGCATCGTCTAATCGAACAGCATTCTATTGACTATTGGCTTTGGGCTGATCTGATATC 553 Query 536 TCCTGAATCCGAAAGGCGTTTAAAAAGTGTCGTGAGGGTTCATAAGCAGCAAGACGCCGA 595 ||||||||| ||||||||||| |||||||||||||| ||||| |||||||| |||||||| Sbjct 554 TCCTGAATCTGAAAGGCGTTTGAAAAGTGTCGTGAGAGTTCAGAAGCAGCAGGACGCCGA 613 Query 596 CTTTTTCTATGTTCCGTTCTTCACTACAATCAGCTTTTTCTTGTTGGAGAAGCAGCAATG 655 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 614 CTTTTTCTATGTTCCGTTTTTCACTACAATCAGCTTTTTCTTGTTGGAGAAGCAGCAATG 673 Query 656 CAAGGCACTCTATAGGGAAGCTTTGAAGTGGGTCACTGATCAGCCTGCTTGGAAGAGGTC 715 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 674 CAAAGCACTCTATAGGGAAGCTTTGAAGTGGGTCACTGATCAGCCTGCTTGGAAGAGGTC 733 Query 716 CGAGGGAAGGGATCACATATTTCCTATTCATCATCCCTGGTCCTTTAAGTCTGTCCGCAA 775 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 734 CGAGGGAAGGGATCACATATTTCCTATTCATCATCCTTGGTCCTTCAAGTCTGTCCGCAA 793 Query 776 ATTTGTGAAAAACGCAATCTGGCTTTTACCAGATATGGACTCCACTGGGAATTGGTATAA 835 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 794 ATTTGTGAAAAACGCAATCTGGCTTTTACCAGATATGGACTCCACTGGCAATTGGTATAA 853 Query 836 GCCTGGGCAAGTTTCATTGGAGAAAGACCTAATCCTTCCTTATGTTCCCAATGTTGATAT 895 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 854 GCCTGGGCAAGTTTCATTGGAGAAAGACCTAATTCTTCCTTATGTTCCCAATGTTGATAT 913 Query 896 CTGTGATGCCAAATGCTTGTCAGAAAGTGCACCGATGAGAACCACATTACTTTTCTTTC- 954 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 914 CTGTGATACCAAATGCTTGTCAGAAAGTGCACCAATGAGAACCACATTACTTTT-TTTCC 972 Query 955 GAGGGCGCCTTAAGAGGAATGCTGGAGGTAAAATACGTGCCAAACTCGGTGCAGAACTAA 1014 ||||||| |||||| | ||||| || |||||||||||||||||||| ||||||||| ||| Sbjct 973 GAGGGCGGCTTAAGCGAAATGCAGGGGGTAAAATACGTGCCAAACTTGGTGCAGAATTAA 1032 Query 1015 GTGGTGTCAAGGGTGTAATAATTTCTGAGGGGACTGCCGGAGAGGGAGGAAAATTGGCAG 1074 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1033 GTGGTATCAAGGATATAATAATTTCTGAGGGGACTGCCGGAGAGGGAGGAAAATTGGCAG 1092 Query 1075 CTCAAGGTGGCATGCGTAGATCTTTATTCTGTTTGTGTCCTGCTGGTGACACACCATCTT 1134 | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1093 CGCAACGTGGCATGCGTAGATCTTTATTCTGTTTGTGTCCTGCTGGTGACACACCATCTT 1152 Query 1135 CGGCGAGATTGTTTGATGCCATTGTCAGTGGCTGTATACCTGTTATAGTCAGTGACGAGT 1194 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1153 CAGCGAGGTTGTTTGATGCCATTGTCAGTGGCTGTATACCTGTTATAGTCAGTGACGAGT 1212 Query 1195 TGGAATTTCCTTTTGAAGGAATACTTGATTACAAGAAGGTTGCTGTGCTTGTTTCTTCCA 1254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1213 TGGAATTTCCTTTTGAAGGAATACTTGATTACAAGAAGGTTGCTGTGCTTGTTTCTTCCA 1272 Query 1255 GTGATGCTGTACAACCAGGGTGGCTTCTAAATCACCTAAGAAGCCTTACGCCCTTCCAAA 1314 ||||||| |||| |||||||||||| |||| || || ||||| ||||||||||||||| Sbjct 1273 GTGATGCAATACAGCCAGGGTGGCTTGTAAACCATCTGAGAAGTCTTACGCCCTTCCAAG 1332 Query 1315 TCAAGGAGTTGCAGAAAAACCTTGCTCAATACTCGCGGCATTTCCTATATTCAAGCCCTG 1374 |||||| ||||||||| || |||||||||||||| || |||||||||||||| ||||||| Sbjct 1333 TCAAGGGGTTGCAGAATAATCTTGCTCAATACTCTCGCCATTTCCTATATTCGAGCCCTG 1392 Query 1375 CTCAGCCATTAGGTCCAGAGGACTTGACATGGAGAATGATGGCCGGAAAGCTAGTGAATA 1434 |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 1393 CTCAGCCATTAGGTCCAGAGGACTTGACATGGAGAATGATAGCCGGAAAGCTGGTGAATA 1452 Query 1435 TCAAGCTTCACACGAGAAGGTCACAGCGGGTCGTGAAAGGATCTAGGAGCCTTTGTAGAT 1494 |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||| Sbjct 1453 TCAAGCTTCACACGAGGAGGTCACAGCGGGTCGTGAAAGGATCTAGGAGTATTTGCAGAT 1512 Query 1495 GCGATTGCTGGAAACCCAACTCCACAGCCATC-AATCCTTTGAATCCTCTCTTGTCTTAA 1553 |||||||||||| | ||||||| |||||| || ||| |||||| | |||||||||||||| Sbjct 1513 GCGATTGCTGGAGATCCAACTCTACAGCC-TCCAATTCTTTGAGTTCTCTCTTGTCTTAA 1571 Query 1554 GACCTATAACTCTGAC 1569 |||| || |||||||| Sbjct 1572 GACCGATCACTCTGAC 1587 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77660243115 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5