BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941230 Length=2698 Score E Sequences producing significant alignments: (Bits) Value AT5G17250.1 | Symbols: | Alkaline-phosphatase-like family prot... 3978 0.0 > AT5G17250.1 | Symbols: | Alkaline-phosphatase-like family protein | chr5:5668900-5673516 REVERSE LENGTH=2871 Length=2871 Score = 3978 bits (2154), Expect = 0.0 Identities = 2388/2500 (96%), Gaps = 19/2500 (1%) Strand=Plus/Plus Query 210 GAACCAAAGCCATGGATGGATAAATTAACAATCTTGCAGAAGCTTGCATTTGCTAATAGA 269 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct 307 GAACCAAAGCCATGGATGGATAAATTAACAATCTTGCAGACGCTTGCATTTGCTAAT-GA 365 Query 270 -TCATCTGCTAAGATCTTTAAGGCTTTTGCTGATCCTCCTACAACTAGTTTGCAGCGTCT 328 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 366 TTCATCTGCTAAGATCTTTAAGGCTTTTGCTGATCCTCCTACAACTAGTTTACAGCGTCT 425 Query 329 CAAGGGTTTAACAACTGGAGGATTGCCTACTTTTATCGATGTTGGGAATAGTTTCGGTGC 388 |||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 426 CAAGGGATTAACAACTGGAGGATTGCCTACTTTTATTGATATTGGGAATAGTTTCGGTGC 485 Query 389 TCCTGCTATCGTTGAGGATAACTTCATCAATCAGTTAGTGCTAAATGGGAAACGGTTGGT 448 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 486 TCCTGCTATTGTTGAGGATAACTTCATTAATCAGTTAGTGCTAAATGGGAAACGGTTGGT 545 Query 449 GATGATGGGTGATGATACTTGGACACAGTTGTTCCCAAATCAATTTCAAAAGTCATATCC 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 546 GATGATGGGTGATGATACTTGGACACAGTTGTTCCCAAATCAATTTCAAAAGTCATATCC 605 Query 509 TTTCCCCTCTTTCAATGTTAAAGACCTGGATACTGTTGATAATGGATGCATAGAGCACCT 568 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 606 TTTCCCCTCTTTCAATGTTAAAGACCTGGATACTGTTGACAATGGATGCATTGAGCACCT 665 Query 569 ATTCCCAACCCTTTACGAAGATGATTGGGATGTTCTCATTGCACATTTTCTCGGCGTGGA 628 |||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 666 ATTCCCAACCCTTTTCAAAGATGATTGGGATGTTCTAATTGCGCATTTTCTCGGCGTGGA 725 Query 629 CCATGCAGGGCACATATATGGAGTGGATTCCAGCCCAATGATTAATAAGTTGGAGCAATA 688 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 726 CCATGCAGGACACATATTTGGAGTGGATTCCAGCCCAATGATTAATAAGTTGGAGCAATA 785 Query 689 TAATTCAGTTTTAGAGAAAGTCATCAATATATTGGAGAGCCAGGCGGGACCAGGTGGTTT 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 786 TAATTCAGTTTTAGAGAAAGTCATCAATATATTGGAGAGCCAGGCGGGACCAGGTGGTTT 845 Query 749 GCATGAGAATACTATGCTTATCGTAATGGGTGACCATGGGCAGACCTTAAATGGGGATCA 808 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 846 GCATGAGAATACTATGCTTATAGTAATGGGTGACCATGGGCAGACATTAAATGGGGATCA 905 Query 809 TGGCGGAGGGACTGCTGAAGAGGTAGAAACAACCATGTTTGCCATGAGTACAAAGAAGCA 868 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 906 TGGCGGAGGGACTGCAGAAGAGGTAGAAACAACCATGTTTGCCATGAGTACAAAGAAGCA 965 Query 869 TACAACTTTGGTTCCTCCTGAGTTCGATACCTCATCTTGTAAAGAAAACACGGATGGGAA 928 |||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| Sbjct 966 CACAACTTTGGTTCCTCCTGAGTTCGATACCTCATCTTGTAAACAAAACAAGGACGGGAA 1025 Query 929 GCAGATTTGTATCAGCTCCATT--G-A-CTTGATTTTGCGGCAACATTGTCAGCTTTGCT 984 |||||| |||||||||| |||| | | ||||||||||| |||||||||||||||||||| Sbjct 1026 GCAGATGTGTATCAGCTACATTGAGCAGCTTGATTTTGCAGCAACATTGTCAGCTTTGCT 1085 Query 985 TGGGATATCATTTCCTTTCGGAAGGTGCCTTCATTGGGCATGTCAACCCTGAGCTATATG 1044 ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 1086 TGGGATATCCTTTCCTTTCGGAA---G----CATTGGGCATGTCAACCCTGAGCTATATG 1138 Query 1045 CCCTTGGTTCCAGCAGCTGGAATTTGGATAACTCTGATTTGGGCAATTTTGGCACCCAAT 1104 ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 1139 CCCTTGGTTCCAGTAGCTGGAATTTGGATAAGTCAGATTTGGGCAATTTTGGCACCCAAT 1198 Query 1105 CGGCTGCTAAGGAGTGGATGAAACATTTCGTTAATGTACTCTGTGTGAATGCATGGCAGG 1164 |||||||||| |||||||||||||||| |||| ||||||| ||||||||||| ||||||| Sbjct 1199 CGGCTGCTAACGAGTGGATGAAACATTACGTTGATGTACTTTGTGTGAATGCTTGGCAGG 1258 Query 1165 TGAAAAGATATATAGATGTTTATTCTAATTCATCTGTTGTTGGTTTCTCTTCCGATGATA 1224 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 1259 TGAAAAGATATATAGATGTGTATTCTAATTCATCGGTTGTTGGTTTCTCTTCCGATGATA 1318 Query 1225 TGTCGAGGATATCAGATCTCTATTCTGCAGCAGAACAGAATTGGTCTAATTCTGTCAAAC 1284 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1319 TGTCAAGGATATCAGATCTCTATTCTGCAGCAGAACAGAATTGGTCCAATTCTGTCAAAC 1378 Query 1285 ACATATTGATGGATAAAAATGGAGATGAGGGTAGTACAGATATATCTGCCCTCCTTAAAG 1344 ||||||||||||||| |||||||||||| || |||||||||||||||||||| ||||||| Sbjct 1379 ACATATTGATGGATAGAAATGGAGATGACGGCAGTACAGATATATCTGCCCTTCTTAAAG 1438 Query 1345 AGCAAATTGCAGCATATTTGAATTTCTTCTCAAGCGTTGTTGAACTTGCCCGGTCTAAGT 1404 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1439 AGCAAATTGCTGAATATTTGAATTTCTTCTCAAGCGTTGTTGAACTTGCCCGGTCTAAGT 1498 Query 1405 GGACAGAGTTCAATCTGAATCTAATGATTACTGGGTTTGGGATATTGGTTATATCACTCA 1464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1499 GGACAGAGTTCAATCTGAATCTAATGATTACTGGGTTTGGGATATTGGTTATATCACTCA 1558 Query 1465 TCCTTCAGTTTCTTGCTGTTTTCCATGGCGACAAATCTTATGCAGTGGGTTCTTGGTTAT 1524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1559 TCCTTCAGTTTCTTGCTGTTTTCCATGGCGACAAATCTTATGCAGTGGGTTCTTGGTTAT 1618 Query 1525 CCACTGGTGCAGCTTTCTCTCTCTTTATAGTAATGATTCGTGCTTGCAGCTTTCTTTCAA 1584 ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| Sbjct 1619 CCACTGGTGCAGCTTTCACTCTCTTTATAGTAACGATTCGAGCTTGCAGCTTTCTTTCAA 1678 Query 1585 ACAGCTATATTTTGGAAGAAGGGAAAGTTGCAAACTTTCTTCTGGCAACAACTGGACTTA 1644 | |||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1679 ATAGCTATATCTTGGAAGAAGGAAAAGTTGCAAACTTTCTCCTGGCAACAACTGGACTTA 1738 Query 1645 TCAAGCTGCGGTACTCTGTTATGAGAAAAACAATGCGGAAAGAAGCTTTTATATTTCTGG 1704 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1739 TCAAGCTGCGGTACTCTGTTATGAGAAAAACAATGCGGAAAGAAGCTTTTATGTTTCTTG 1798 Query 1705 CTATGGTTTCTGTTCTCAGAGTTTCTATAGATATTGGGCTAACAAAGCAAGCTGCAACTT 1764 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1799 CTATGGTTTTTGTTCTCAGAGTTTCTATAGATATTGGGCTAACAAAGCAAGCTGCAACTT 1858 Query 1765 CTCAGTTTATGAGTAGCTCACCATCGTGGATGCTCGGGATAGCTCCAGACCATCCAGCAT 1824 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1859 CTCAGTTTATGAGTAGCTCACCATCGTGGATGCTAGGGATAGCTCCAGACCATCCAGCAT 1918 Query 1825 TGACATATGCGGTTGAAATTGCACCAATTCTGTCAGTGGTTATACTGATTTGTGTGCTCT 1884 ||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 1919 TGACATATGCGATTGAAATTGCACCAATTCTGTCAGTGGTTATACTCATTTGCGTGCTCT 1978 Query 1885 ACATAGCAATTTCGAAAGCACCCAGTGAGGGGCTGTGGAAGTATGTTACTATTGGTAGTA 1944 || |||| ||| |||||||||||| ||||||| ||||||||||||||||| ||||||||| Sbjct 1979 ACGTAGCCATTGCGAAAGCACCCAATGAGGGGGTGTGGAAGTATGTTACTGTTGGTAGTA 2038 Query 1945 TG--G--T-AA-TGACTGGAGGAAGAAACCGCATCCCTCAAACGGTTTATGTAATCGGAT 1998 || | | || |||| ||||||||||||||||| |||||||||||||||||||| |||| Sbjct 2039 TGTTGCTTCAAGTGACGGGAGGAAGAAACCGCATTCCTCAAACGGTTTATGTAATTGGAT 2098 Query 1999 TGGTGCAGCTCTGCCTTTTAGCTTCCGCACGCATGTTTTGCGCAGGAAAAGACAAGAATT 2058 ||||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||||||| Sbjct 2099 TGGTGCAGCTCTGCCTTTTAGCTTCTGCACGTATGTTTTGCACAGAAAAAGACAAGAATT 2158 Query 2059 GGGCCATCAGAACTGTCGCTCTTGTATCTGCTTGTAGTTCGCCAGTAGTTCTATTGTCGG 2118 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct 2159 GGGCCATCAGAACTGTCGCTCTTGTATCTGCTTGTAGTTCGCCAATAATTCTATTGTCGG 2218 Query 2119 GGAAGCAAGGATCAATGCTTGCATTAGCATATTTAGTTGCTGGCTATTGTATAATGAGGC 2178 ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct 2219 GGAAGCAAGGATCAATGCTTGCATTAGTATATTTAGTGGCTGGCTATTGTATAATGAGGC 2278 Query 2179 TGGAGGGTGTAGAGAGAAGAACCAAATCAGATGGACAGAGCAAATTCTCAAAACTAAATC 2238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2279 TGGAGGGTGTAGAGAGAAGAACCAAATCAGATGGACAGAGCAAATTCTCAAAACTAAATC 2338 Query 2239 CTCTCTGTGTGGTGCAATGGAGTCTTCTTTCTATATGCATGTTCTTCGCCAGCGGGCATT 2298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2339 CTCTCTGTGTGGTGCAATGGAGTCTTCTTTCTATATGCATGTTCTTCGCCAGCGGGCATT 2398 Query 2299 GGTGCGCCTTTGATGGCCTCCGTTATGGAGCTGCATTTGTTGGGTTTGATGAGTTTGTGC 2358 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 2399 GGTGCGCCTTTGATGGCCTTCGTTATGGAGCTGCATTTGTGGGGTTTGATGAGTTTGTGC 2458 Query 2359 TTATACGACAAGCCATCCTTTTGACAATCGAAACATTTGGATTCTCGATTATCCTCTCTG 2418 |||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||| Sbjct 2459 TTATACGACAAGCCATTCTTTTGACAATCGAGACATTTGGATTCTCGATCATCCTTTCTG 2518 Query 2419 TATTTGGACTTCCTCTCCTCGTACCTATTCACTCTCAAACTCCTCAGGCTCATGGAGAGA 2478 |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || | Sbjct 2519 TATTTGGACTTCCTCTCCTCATACCTTTTCACTCTCAAACTCCTCAGGCTCATGGCGAAA 2578 Query 2479 AGCGCCACCAGTTGTTTCAAATATATATGCTCTTTGGAGTTATATCTGCGACTACAGTCA 2538 |||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| Sbjct 2579 AGCGCCACCAGTTGTTTCAAATGTATATGCTCTTTGGAGTTATATCTGCAACCACAGTCA 2638 Query 2539 CAGCTACAATTCTCTGCGTCACCATCCAGAGAAGACATCTGATGGTTTGGGGTTTGTTTG 2598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2639 CAGCTACAATTCTCTGCGTCACCATCCAGAGAAGACATCTGATGGTTTGGGGTTTGTTTG 2698 Query 2599 CTCCAAAGTTTGTCTTTGACGTTGTTGGTCTCATCCTCACTGATCTCCTCATCTGTTTGG 2658 |||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct 2699 CTCCAAAGTTCGTCTTTGACGTTGTTGATCTCATCCTTACTGATCTCCTCATCTGTTTGG 2758 Query 2659 CTTCAGCTTACTATCTTTAATTAATACTTGCAATTGATGA 2698 |||||||||||||||||| ||| ||||||||||||||||| Sbjct 2759 CTTCAGCTTACTATCTTTGATTCATACTTGCAATTGATGA 2798 Score = 285 bits (154), Expect = 2e-75 Identities = 179/191 (94%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 21 ATGGAGACGTATCTGAAGAATAAGAAGTTGATAGCTTTAGGCTTTCTCTTGATTCACGCC 80 |||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||| Sbjct 1 ATGGAGACATATCTGAAGAACAAGAAGTTGACAGCTTTAGGATTTCTCTTGATTCACGCC 60 Query 81 ATCGCCATTTTGATCTTCACGCGTGGGTTTCTTCTCACTCGAACAGAGCTTCCTTTTCAC 140 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 61 ATCGCCATTTTGATCTTCACGCGTGGGTTTCTTCTCACGCGAACAGAGCTTCCTTTCCAC 120 Query 141 AGTACTTGCTCCGACGTTTCTCTCTCTCCTTGCCTTGCTTCACAACA-TCCAAATCACGA 199 ||||||||||||||||||||||||||||||||||||||||| | || ||||| |||||| Sbjct 121 AGTACTTGCTCCGACGTTTCTCTCTCTCCTTGCCTTGCTTCTCCACGCTCCAA-TCACGA 179 Query 200 TTCGAGCTCGG 210 ||| ||||||| Sbjct 180 TTCAAGCTCGG 190 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 133995904753 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5