BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg941232
Length=2725
Score E
Sequences producing significant alignments: (Bits) Value
AT5G17270.1 | Symbols: | Protein prenylyltransferase superfami... 4132 0.0
AT5G37130.1 | Symbols: | Protein prenylyltransferase superfami... 3373 0.0
> AT5G17270.1 | Symbols: | Protein prenylyltransferase superfamily
protein | chr5:5679991-5685597 FORWARD LENGTH=2704
Length=2704
Score = 4132 bits (2237), Expect = 0.0
Identities = 2557/2709 (94%), Gaps = 31/2709 (1%)
Strand=Plus/Plus
Query 22 AACCATGGTCGACGGCGAAATTGAAATCCTTCGCGGTTACGAGCTCCGTCTCCTCCGGTG 81
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AACCATGGTCGACGGCGAAGTTGAAATCCTTCGCGGTTACGAGCTCCGTCTCCTCCGGTG 60
Query 82 CACCGTCTCGTTAACACA-ATCAGATCCTCCTCTCGAAT------CG--C-A--G----- 124
||| || || || |||| | ||| | |||||||||||| || | | |
Sbjct 61 CACTGTATCCTTTCCACAGA-CAGGTTCTCCTCTCGAATCCCAGCCGCTCGATGGAACTC 119
Query 125 --TCCGGAGTTCATCCATACGACTCTCTTATAAGGTCCCTTTTGTCTTCAATCGAGGCTG 182
|||||| |||||| ||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 120 AATCCGGAACCCATCCACACGACTCTCTTATAACGTCTCTTTTGTCTTCAATCGAGGCTG 179
Query 183 GAGACTATCTTGGAGCTCTAGCCTCCGACGCTACTAGGCTAATAATCGGAGATTCCGAGT 242
|||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||
Sbjct 180 GAGACTATCTTGGAGCTCTATCCTCCGACGCTACTAAGCTAATACTCGGAGATTCCGAGT 239
Query 243 TCGAA-GTAGTTGATACGGTTGATTCCGCTGAGCGAGTTTACTCCGAGCTTCTCTACAAG 301
| || | |||||||||||||||||||| |||| ||||||||||||||||||| |||||
Sbjct 240 T-AAACTTGGTTGATACGGTTGATTCCGCCGAGCAAGTTTACTCCGAGCTTCTCGACAAG 298
Query 302 GTCGAATCGTTCGTGTTAAACGAATCTTCAGATGAAATCGGTAAGGCTCGCCGTGCTGTT 361
||||||||||||||| | ||||| |||||||||||||||| |||||||||||||||||||
Sbjct 299 GTCGAATCGTTCGTGGTGAACGATTCTTCAGATGAAATCGATAAGGCTCGCCGTGCTGTT 358
Query 362 CTGGTGATGTGCTTAGCAATTGCGGCTGCTTTTTGGTTCACTCGGTGCAATTTGACCGGG 421
|||||||||||||||||||| || ||||||| |||||||| || |||||| |||| |||
Sbjct 359 CTGGTGATGTGCTTAGCAATCGCTACTGCTTTGTGGTTCACCCGTTGCAATCTGACTGGG 418
Query 422 TCGACAGAAGGATCAACAAAATGTTCGTT-ACCGTTTGTAGTATCAGAAAGTAAAGAACT 480
|| || ||||||||||| ||||||||||| || || | ||| ||||| ||||| ||| |
Sbjct 419 TCAACGGAAGGATCAACGAAATGTTCGTTGCCCCTTAG-AGTGTCAGAGAGTAAGGAATT 477
Query 481 AGTTGAATGGGAGAACTGGGCTAAGATTCAGCTCATGTCTGTTGGTTCTGACTTGCTCGG 540
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 478 AGTTGAGTGGGAGAACTGGGCTAAGATTCAGCTCATGTCTGTCGGTTCTGACTTGCTTGG 537
Query 541 GAAGTTTTTTAATCTCCAGCATTTAGTTTTTGCTAGAATGCTTCTGTTAAAGTTGAAAGA 600
|||||||| |||||||||||||||||||||||||||| |||| ||||| |||||||||||
Sbjct 538 GAAGTTTTCTAATCTCCAGCATTTAGTTTTTGCTAGATTGCTCCTGTTCAAGTTGAAAGA 597
Query 601 TTTGTTGTTTGAGACAACTGCAACTGAAACTTTTGAATTAAGGAGTATTTCATGGTGGCT 660
|||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 598 TTTGTTGTTTGAGATAACTTCAACTGAAACTTTTGAAGTAAGGAGTATTTCATGGTGGCT 657
Query 661 TGTCAGAGTTTTACTTATCCATCAAAGAGTTCTACACGAGCGATCTTCATCTTTGTTTGA 720
||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||
Sbjct 658 TGTCAGAGTTTTACTGATTCATCAAAGAGTTCTACAAGAGCGATCTTCATCTTTGTTTGA 717
Query 721 GATGTTGCAAGTTTACATGGCCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTAAA 780
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 718 AATGTTGCAAGTTTACATGGCCGAAGCTATAGACCATTTTGGAGAATTGGAAAAAGTAAA 777
Query 781 AAGCTACTGGGGTGCCAAGTTGCTAGTAGACGAAGCTTCATCCATCACGTCAACCATCCA 840
|||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||
Sbjct 778 AAGCTACTGGGGTGCCAATTTGCTAGAAGACGAAGCTTCATCCATCACGTCAACTATCCA 837
Query 841 TCTGGAGGCATGTGTACTGCAATATATATATGGAAGGATTGATCCTGCTCGGTTGCAGCT 900
|||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 838 TCTGGAAGCATGTGTACTGCAATATATATATGGAAGGATTGATCCTTCACGGTTGCAGCT 897
Query 901 TGAATCTGCTAAAGCAGCAGCAGGGCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCG 960
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 898 TGAATCTGCTAAAGCAGCAGCAAGCCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCG 957
Query 961 TACTATTCACCAAGTAGATCCAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATC 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 TACTATTCACCAAGTAGATCCAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATC 1017
Query 1021 CAATGGGGATGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGAAGCTTGGGG 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 CAATGGGGATGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGAAGCTTGGGG 1077
Query 1081 AGGTGAAGCACCTGAAGTATATATGACTCCCAAACTAGTAAACAACGAGAGTGAAGCTGG 1140
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1078 AGGTGAAGCACCTGAAGTATATATGACTCCCAAACTAGTGAACAACGAGAGTGAAGCTGG 1137
Query 1141 GAAAGATTCTGTGCCCTTAAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCT 1200
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 CAAAGATTCTGTGCCCTTGAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCT 1197
Query 1201 AATTGAAAGGGGTAGTAGGCACGATGAGATGCAAAGATGGGATATGGCTCCATATATTGA 1260
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 AATTGAAAGGGGTAGTCGGCACGATGAGATGCAAAGATGGGATATGGCTCCATATATTGA 1257
Query 1261 GGCAATTGATTCTCAAAAGTCAACACATTTTGTTCTACGGTGTTTTTGTGACTTATTACG 1320
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1258 GGCAATAGATTCTCAAAAGTCAACATATTTTGTTCTACGGTGTTTTTGTGACTTACTACG 1317
Query 1321 TGTTCGATGGGAATCAACTAGAGGTCGTACAAAGGGACGCGCCCTGGAGATGATGGATAA 1380
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1318 TGTTCGATGGGAATCAACTAGAGGTCGTACAAAGGGACGCGCCCTAGAGATGATGGATAA 1377
Query 1381 ATTGGTTGGAGCTATTAACAAGAGCGATCCTGGAGTATCAAACCGTATCCCTTTATGCTA 1440
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 1378 ATTGGTTGGAGCTATTAACAAGAGCGATCCTGGAGTATCAAACAGGATCCCTTTATGCTA 1437
Query 1441 TGCAGTCCATCTTCCTACTATTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAG 1500
||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 1438 TGCTGTCCATCTTCCTACTATTCCTGCTCTGAGAAAGGAATACGGTGAGCTTCTGGTGAG 1497
Query 1501 TTGCGGTTTGGTTGGGGAAGCAATCACAATATTTGAGAGCCTGGAACTGTGGGATAATCT 1560
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 1498 TTGCGGTTTGGTTGGGGAAGCAATCACCATATTTGAGAGCCTGGAATTGTGGGATAATCT 1557
Query 1561 AATCTACTGCTACTGCCTTCTGGGAAAGAAATCAGCAGCTGTAGATCTCATCAATGCACG 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 AATCTACTGCTACTGCCTTCTGGGAAAGAAATCAGCAGCTGTAGATCTCATCAATGCACG 1617
Query 1621 GCTTGATGAACGGCCAAATGACCCAAGATTATGGTGTTCACTGGGTGATGTTACTATTAA 1680
|||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 1618 GCTTCTTGAACGGCCAAATGACCCAAGATTATGGTGTTCACTTGGTGATGTTACTATAAA 1677
Query 1681 TGATTCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGATAAGTCAGTTCGTGCTAAGCG 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1678 TGATTCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGATAAGTCAGTTCGTGCTAAGCG 1737
Query 1741 GGCTCTTGCACGCAGCGCCTACAATCGGGGTGATTTTGAGAAGTCGAAGATGCTGTGGGA 1800
|||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1738 CGCTCTTGCTCGCAGCGCATACAATCGCGGTGATTTTGAGAAGTCAAAGATGCTGTGGGA 1797
Query 1801 GGCTGCAATGGCCTTAAATTCTCTGTACCCAGATGGTTGGTTTGCTCTTGGTGCTGCTGC 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1798 GGCTGCAATGGCCTTAAATTCTCTGTACCCAGATGGTTGGTTTGCTCTTGGTGCTGCTGC 1857
Query 1861 ATTGAAGGCCAGGGATGTTCAGAAAGCACTGGATGCATTCACTTTTGCTGTTCAACTTGA 1920
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1858 GTTGAAGGCCAGGGATGTTCAGAAAGCACTGGATGCATTCACTTTTGCTGTTCAACTTGA 1917
Query 1921 TCCCGACAATGGGGAGGCTTGGAACAACATTGCTTGTCTGCATATGATAAAGAAAAAGAG 1980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1918 TCCCGACAATGGGGAGGCTTGGAACAACATTGCTTGTCTGCATATGATAAAGAAAAAGAG 1977
Query 1981 CAAAGAATCATTCATTGCGTTCAAAGAAGCACTTAAATTCAAGCGAGATAGCTGGCAGAT 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1978 CAAAGAATCATTCATTGCGTTCAAAGAAGCACTTAAATTCAAGCGAGATAGCTGGCAGAT 2037
Query 2041 GTGGGAGAATTTCAGTCATGTAGCTATGGATGTGGGAAATATTGATCAGGCCTTTGAAGC 2100
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2038 GTGGGAAAATTTCAGTCATGTCGCTATGGATGTGGGAAATATTGATCAGGCCTTTGAAGC 2097
Query 2101 TATACAACAGATACTGAAAATGAGCAAAAACAAGAGGGTTGATGTTGTTTTATTGGACCG 2160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2098 TATACAACAGATACTGAAAATGAGCAAAAACAAGAGGGTTGATGTTGTTTTATTGGACCG 2157
Query 2161 TATAATGACAGAGTTAGAAAATAGGAATTCAGCATGTAAGTCATC-T-T-CATCGATTGA 2217
||||||||||||||||||||| ||||||||||||||||||||||| | | |||||| |||
Sbjct 2158 TATAATGACAGAGTTAGAAAAGAGGAATTCAGCATGTAAGTCATCATCTTCATCGACTGA 2217
Query 2218 AACCGAAACTTCTTCAGATGAATCAGCAGAAACAAAACCATGTACTGCAACACCAGCTGA 2277
||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 2218 AACCGAAGCTTCTTCAGATGAGTCAACAGAAACAAAACCATGTACTGCAACACCAGCTGA 2277
Query 2278 AACTCAACGCCAGCTAGAGTTGCTTGGGAAAATTATTCAGCAGATTGTCAAAACAGAAAG 2337
|||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||
Sbjct 2278 AACTCAACGCCAGCTAGAATTACTTGGGAAAGTTATTCAGCAGATTGTCAAAACAGAAAG 2337
Query 2338 TACATCTGAAATCTGGGGATTATATGCAAGATGGAGTAGAATCAAAGGAGATCTTATGGT 2397
|||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 2338 TACAGCAGAAATCTGGGGGTTATATGCAAGATGGAGTAGAATCAAAGGAGATCTTACGGT 2397
Query 2398 ATGCAGCGAGGCACTGTTAAAGCAAGTGCGATCATATCAGGGATCAGAAGTTTGGAAAGA 2457
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2398 ATGCAGCGAGGCACTGTTAAAGCAAGTGCGATCATATCAGGGATCAGAAGTGTGGAAAGA 2457
Query 2458 CAAAGAGCGTTTCAAGAATTTTGCAAGAGCATCATTGGAACTTTGTAGAGTGTACATGGA 2517
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 2458 CAAAGAGCGTTTCAAGAAGTTTGCAAGAGCATCATTGGAACTTTGTAGAGTGTATATGGA 2517
Query 2518 GATCTCAG-TGTCCACAGGAAGCAAACGAGAACTGTTTAGTGCTGAGATGCATTTGAAGA 2576
|||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2518 GATCTCAGCT-TCCATAGGAAGCAAACGAGAACTGTTTACTGCTGAGATGCATTTGAAGA 2576
Query 2577 ACACAATCAAACAAGCTACAATGAGCTTCTTGGACACTGAAGAATTGAAGGAACTTGAAA 2636
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct 2577 ACACAATCAAACAAGCTACAGTGAGCTTCTTGGACAGTGAAGAATTGAAGGAACTTGAAA 2636
Query 2637 GTTGCCTTGAGGAGGTGAGAAATGTAATGCAGAAGAGTGATGAAGAG-ACTAGAAATACA 2695
|||||||||||||||| |||||||| |||||||| ||||| |||||| | |||| |||||
Sbjct 2637 GTTGCCTTGAGGAGGTAAGAAATGTCATGCAGAAAAGTGAAGAAGAGTA-TAGAGATACA 2695
Query 2696 AAAATATGA 2704
|||| ||||
Sbjct 2696 AAAACATGA 2704
> AT5G37130.1 | Symbols: | Protein prenylyltransferase superfamily
protein | chr5:14681378-14686684 FORWARD LENGTH=2866
Length=2866
Score = 3373 bits (1826), Expect = 0.0
Identities = 2431/2712 (90%), Gaps = 85/2712 (3%)
Strand=Plus/Plus
Query 18 GTACAACCATGGTCGACGGCGAAATTGAAATCCTTCGCGGTTACGAGCTCCGTCTCCTCC 77
|||| |||||||||| ||| ||| || |||| |||||||| ||||| ||||||||| |||
Sbjct 70 GTACCACCATGGTCGGCGGGGAAGTTAAAATTCTTCGCGGGTACGAACTCCGTCTCATCC 129
Query 78 GGTGCACCGTCTCGTTAACACAATCAGATCCTCCTCTC---GAATCGCAGTCCGGAGTTC 134
||||||||||||| || ||| |||||||||||||||| ||||| || ||||| |
Sbjct 130 GGTGCACCGTCTCTTTGCCACTATCAGATCCTCCTCTCGATGAATCCCAACCCGGAACCC 189
Query 135 ATCCATACGACTCTCTTATAAGGTCCCTTTTGTCTTCAATCGAGGCT-GGAGACTATCTT 193
||||| ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct 190 ATCCACACGACTCTCTTATAAAGTCCCTTTTGTCTTCAATCGAGGCTGGGA-ACTATCTT 248
Query 194 GGAGCTCTAGCCTCCGACGCTACTAGGCTAATAATCGGAGATTCCGAGTTCGAAGTAGTT 253
| |||| |||||||||| ||||||| |||||| || | || |||| || ||| |
Sbjct 249 GAAGCTTTAGCCTCCGAAGCTACTAATCTAATACTC-G-GA----GAGTACG-AGT--TC 299
Query 254 GATACGGTTGATTCCGCTGAGCGAGTTTACTCCGAGCTTCTCTACAAGGTCGAATCGTTC 313
|| ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||
Sbjct 300 GACCCGGTTGATTCCGCCGAGCGAGTTTACTCCGAGCTTCTCAACAAAGTCGAATCGTTC 359
Query 314 GTGTTAAACGAATCTTCAGATGAAATCGGTAAGGCTCGCCGTGCTGTTCTGGTGATGTGC 373
||||| ||||| ||||| |||||||||| ||||||||| ||| || |||| |||||||||
Sbjct 360 GTGTTGAACGATTCTTCGGATGAAATCGATAAGGCTCGGCGTTCTTTTCTTGTGATGTGC 419
Query 374 TTAGCAATTGCGGCTGCTTTTTGGTTCACTCGGTGCAATTTGACCGGGTCGACAG-AAGG 432
|||||||| ||||||||||||||||||||| | |||||||||||||||||||| | ||||
Sbjct 420 TTAGCAATCGCGGCTGCTTTTTGGTTCACTTGTTGCAATTTGACCGGGTCGAC-GCAAGG 478
Query 433 ATCAACAAAATGTTCGTTACCGTTT-GTAGTATCAGAAAGTAAAGAACTAGTTGAATGGG 491
||||||||||||||||||||||||| | |||| |||||||||| ||| | ||||||||||
Sbjct 479 ATCAACAAAATGTTCGTTACCGTTTAG-AGTACCAGAAAGTAAGGAATTGGTTGAATGGG 537
Query 492 AGAACTGGGCTAAGATTCAGCTCATGTCTGTTGGTTCTGACTTGCTCGGGAAGTTTTTTA 551
||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||
Sbjct 538 AGAACTGGGCTAAGATTCATCTCATGTCTGCAGGTTCTGACTTGCTCGGGAAGTTTTCTA 597
Query 552 ATCTCCAGCATTTAGTTTTTGCTAGAATGCTTCTGTTAAAGTTGAAAGATTTGTTGTTTG 611
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 598 ATCTCCAGCATTTAGTTTTTGCTAGATTGCTGCTGTTAAAGTTGAAAGATTTGTTGTTTG 657
Query 612 AGACAACTGCAACTGAAACTTTTGAA-TTAAGGAGTATTTCATGGTGGCTTGTCAGAGTT 670
|||||| ||| ||||||||||| || || |||||||||||||||||||||||||||||
Sbjct 658 AGACAAGTGCCTCTGAAACTTTTCAACTT-AGGAGTATTTCATGGTGGCTTGTCAGAGTC 716
Query 671 TTACTTATCCATCAAAGAGTTCTACACGAGCGATCTTCATCTTTGTTTGAGATGTTGCAA 730
|||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 717 TTACTTATTCATCAAAGAGTTCTTCACGAGCCATCTTCATCTTTGTTTGAGATGTTGCAA 776
Query 731 GTTTACATGGCCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTAAAAAGCTACTGG 790
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 777 GTTTACATGGCCGAAGCTCTAGACCATTTTGGAGCATTGGAAAAAGTCGAAAGCTACTGG 836
Query 791 GGTGCCAAGTTGCTAGTAGACGAAGCTTCATCCATCACGTCAACCATCCATCTGGAGGCA 850
||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||
Sbjct 837 GGTGCCAAGTTGCTACAAGACGAAGCTTCATCCATCACGTCAATCATCCATCTGGAAGCA 896
Query 851 TGTGTACTGCAATATATATATGGAAGGATTGATCCTGCTCGGTTGCAGCTTGAATCTGCT 910
||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||
Sbjct 897 TGTGTACTGCAATATATATATCGAAGGATTGACCCTTTTCGGTTGCAGCTTGAATCTGCT 956
Query 911 AAAGCAGCAGCAGGGCTAGAGTTCTCTGTTACCGGGGCTCTTGGATTTCGTACTATTCAC 970
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 957 AAAGCAGCAGCAGGGCTAGAGTTCTCTGTTACTGGGGCTCTGGGATTTCGTACTATTCAC 1016
Query 971 CAAGTAGAT-CCAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATCCAATGGGGA 1029
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 CAAGTAG-TGCCAAAGGCACAGATGGTATTGGTAGCCAATACTAGCTCATCCAATGGGGC 1075
Query 1030 TGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGAAGCTTGGGGAGGTGAAGC 1089
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |
Sbjct 1076 TGTGAGGTTGGCCTCTGAGAAAGCTGATGTTGGACCTTATGGAGCTTGGGAAGGTGAAAC 1135
Query 1090 ACCTGAAGTATATATGACTCCCAAACTAGTAAACAACGAGAGTGAAGCTGGGAAAGATTC 1149
|||| |||| | |||||||||||||||||| |||||||||||||||||||| | ||||||
Sbjct 1136 ACCTCAAGTGTTTATGACTCCCAAACTAGTGAACAACGAGAGTGAAGCTGGCACAGATTC 1195
Query 1150 TGTGCCCTTAAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAATTGAAAG 1209
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 AGTGCCCTTAAAACCAGTTGAACAGGCATTGATTTTGGCCCAGTGCCTTCTAATTGAAAG 1255
Query 1210 GGGTAGTAGGCACGATG-AGATGCAAAGATGGGATATGGCTCCATATATTGAGGCAATTG 1268
||||||| ||||||||| | |||||||| |||||||||||||||||||||||||||||||
Sbjct 1256 GGGTAGTCGGCACGATGCA-ATGCAAAGTTGGGATATGGCTCCATATATTGAGGCAATTG 1314
Query 1269 ATTCTCAAAAGTCAACAC-ATTTTGTTCTACGGTGTTTTTGTGACTTATTACGTGTTCGA 1327
|||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||
Sbjct 1315 ATTCTCAAAAGTCAAC-CTATTTTGTTCTACGGTGTTTTTGTGACTTATTGCGTGTTCGA 1373
Query 1328 TGGGAATCAACTAGAGGTCGTACAAAGGG-ACGCGCCCTGGAGATGATGGATAAATTGGT 1386
||||||||| || || |||||| ||||| |||||||| ||| ||||||||||| ||||
Sbjct 1374 TGGGAATCATCTCGATATCGTAC-AAGGGAACGCGCCCGGGATATGATGGATAAGCTGGT 1432
Query 1387 TGGAGCTATTAACAAGAGCGATCCTGGAGTATCAAACCGTATCCCTTTATGCTATGCAGT 1446
||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1433 TGGAGCTATTAGCAAGAGCGATCCTGGAGTATCAAATCGGATCCCTTTATGCTATGCAGT 1492
Query 1447 CCATCTTCCTACTATTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAGTTGCGG 1506
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1493 GTATCTTCCTACTATTCCTGCTTTGAGAAAGGAATATGGTGAGCTTCTGGTGAGTTGTGG 1552
Query 1507 TT-TGGTTGGGGAAGCAATCACAATATTTGAGAGCCTGGAACTGTGGGATAATCTAATCT 1565
|| | |||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 1553 TTAT-GTTGGGGAAGCAATCACAATATTTGAGAGCCTGGAATTGTGGGATAATCTAATTT 1611
Query 1566 ACTGCTACTGCCTTC-TGGGAAAGAAATCAGCAGCTGTAGATCTCATCAATGCACGGCTT 1624
|||||||||| || | |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1612 ACTGCTACTG-CTCCATGGGAAAGAAATCAGCGGCTGTAGATCTCATCAATGCACGGCTT 1670
Query 1625 GATGAACGGCCAAATGACCCAAGATTATGGTGTTCACTGGGTGATGTTACTATTAATGAT 1684
|||||| ||||||||||||||||||||||||||| ||||||||||||| ||| |||
Sbjct 1671 CTTGAACGCCCAAATGACCCAAGATTATGGTGTTCATTGGGTGATGTTACGATTTCCGAT 1730
Query 1685 TCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGATAAGTCAGTTCGTGCTAAGCGGGCT 1744
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1731 TCCTGTTATGAAAAAGCCCTGGAAGTTTCAAATGACAAATCAGTTCGTGCTAAGCGGGCT 1790
Query 1745 CTTGCACGCAGCGCCTACAATCGGGGTGATTTTGAGAAGTCGAAGATGCTGTGGGAGGCT 1804
||||| || ||||| |||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1791 CTTGCTCGAAGCGCATACAATCGCGGTGATTTTGAGAAGTCGAAGATACTGTGGGAGGCT 1850
Query 1805 GCAATGGCCTTAAATTCTCTGTACCCAGATGGTTGGTTTGCTCTTGGTGCTGCTGCATTG 1864
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 1851 GCAATGGCGTTAAATTCTCTGTATTCAGATGGTTGGTTTGCTCTTGGTGCTGCTGCGTTG 1910
Query 1865 AAGGCCAGGGATGTTCAGAAAGCACTGGATGCATTCACTTTTGCTGTTCAACTTGATCCC 1924
|||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1911 AAGGCCAGGGATCTTCAGAAAGCACTGGATGCATTCACTTTAGCTGTTCATCTTGATCCT 1970
Query 1925 GACAATGGGGAGGCTTGGAACAACATTGCTTGTCTGCATATGATAAAGAAAAAGAGCAAA 1984
|||||| || ||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1971 GACAATTGGCTGGCTTGGAACAACATTGCTAGTCTGCATATGATTAAGAAAAAGAGCAAA 2030
Query 1985 GAATCATTCATTGCGTTCAAAGAAGCACTTAAATTCAAGCGAGATAGCTGGCAGATGTGG 2044
|||||||||||||| |||||||||| |||||||| || ||||| ||||||||||| |||
Sbjct 2031 GAATCATTCATTGCATTCAAAGAAGTGCTTAAATTAAACCGAGACAGCTGGCAGATATGG 2090
Query 2045 GAGAATTTCAGTCATGTAGCTATGGATGTGGGAAATATTGATCAGGCCTTTGAAGCTATA 2104
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2091 GAGAATTTCAGCCATGTAGCTATGGATGTGGGAAATACTGATCAGGCCTTTGAAGCTATA 2150
Query 2105 CAACAGATACTGAAAATGAGCAAAAACAAGAGGGT-TGA-TGTTGTTTTATTGGACCGTA 2162
||||||||| ||| | ||| | ||||||||| || | | |||||||||||||||||||
Sbjct 2151 CAACAGATAATGAGATTGACCCAAAACAAGA--GTATCAGTGTTGTTTTATTGGACCGTT 2208
Query 2163 TAATGACAGAGTTAGAAAATAGGAATTCAGCATGTAAGTCATCTTCATCGATTGAAACCG 2222
|||||||||| || | | | || | || | || | | | ||| | | | ||
Sbjct 2209 TAATGACAGA-TTTG--GA-A--AA-T-AG---G-AA-T-A---T-ATC-A-T---A-CG 2244
Query 2223 AAACTTCTTCAGATGAATCAGCAGAA-ACAAAACCATGTACTGCAAC-ACCAGCTGAA-A 2279
|| |||||||| |||||| | | || ||||||||| | |||| ||| | || |
Sbjct 2245 AATCTTCTTCAAATGAATTAATA-AAGACAAAACCA---A---CAACGACC-G--AAAGA 2294
Query 2280 CTCAACGCCAGCTAGAGTTGCTTGGGAAAATTATTCAGCAGATTGTCAAAACAGAAAGTA 2339
||| | || |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CTCTA---CA--TAGAGTTGTTTGGGAAAATTATTCAGCAGATTGTCAAAACAGAAAGTA 2349
Query 2340 CATCTGAAATCTGGGGATTATATGCAAGATGGAGTAGAATCAAAGGAGATCTTATGGTAT 2399
||| ||||| |||||||||||| |||||||||||||||||||| |||||||||| | |||
Sbjct 2350 CATTTGAAAACTGGGGATTATACGCAAGATGGAGTAGAATCAATGGAGATCTTACGATAT 2409
Query 2400 GCAGCGAGGCACTGTTAAAGCAAGTGCGATCATATC-AGGGATCAGAAGTTTGGAAAGAC 2458
| ||||||||||||||||| |||||||||||||||| ||| | |||| | |||||||||
Sbjct 2410 GTAGCGAGGCACTGTTAAAACAAGTGCGATCATATCTGGGGGT-AGAAATGTGGAAAGAC 2468
Query 2459 AAAGAGCGTTTCAAGAATTTTGCAAGAGCATCATTGGAACTTTGTAGAGTGTACATGGAG 2518
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 2469 AAAGAGCGTTTCAAGAAGTTTGCAAGAGCATCATTGGAACTTTGTAGAGTGTACATAGAG 2528
Query 2519 ATCTCAGTGTCCACAGGAAGCAAACGAGAACTGTTTAGTGCTGAGATGCATTTGAAGAAC 2578
||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2529 ATCTCAGCGTCTGTAGAAAGCAAACGAGAACTGTTTAGTGCTGAGATGCATTTGAAGAAC 2588
Query 2579 ACAATCAAACAAGCTACAATGAGCTTCTTG-GACACTGAAGAATTGAAGGAACTTGAAAG 2637
|||||||||||||||| || |||||| | | || ||||||||||||||||| ||||||||
Sbjct 2589 ACAATCAAACAAGCTAGAAAGAGCTT-TGGTGAGACTGAAGAATTGAAGGAGCTTGAAAG 2647
Query 2638 TTGCCTTGAGGAGGTGAGAAATGTAATGCAGAAGAGTGATGAAGAGACTAGAAATACAAA 2697
||||||||||||||| |||||||| | ||||||| | ||||| ||||| ||| | ||
Sbjct 2648 TTGCCTTGAGGAGGTCAGAAATGTTACGCAGAAGT-T--TGAAGGGACTACAAACATTAA 2704
Query 2698 AATATGAAAGAA 2709
|| || ||||||
Sbjct 2705 AACATAAAAGAA 2716
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135350412214
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5