BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg941250
Length=3119
Score E
Sequences producing significant alignments: (Bits) Value
AT5G17420.1 | Symbols: IRX3, CESA7, ATCESA7, MUR10 | Cellulose ... 5204 0.0
AT4G18780.1 | Symbols: CESA8, IRX1, ATCESA8, LEW2 | cellulose s... 444 3e-123
> AT5G17420.1 | Symbols: IRX3, CESA7, ATCESA7, MUR10 | Cellulose
synthase family protein | chr5:5736630-5741465 REVERSE LENGTH=3368
Length=3368
Score = 5204 bits (2818), Expect = 0.0
Identities = 3019/3118 (97%), Gaps = 5/3118 (0%)
Strand=Plus/Plus
Query 1 TGCTAATCTCCGGCCGTTGCTATGGAAGCCAGCGCCGGTCTTGTCGCCGGTTCTCATAAC 60
||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 38 TGCTAATCTCCGGCCGTCCCTATGGAAGCTAGCGCCGGTCTTGTCGCCGGTTCTCATAAC 97
Query 61 CGTAACGAACTTGTCGTCATTCACAACCATGAAGAGCCAAAGCCTCTAAAGAATTTAGAT 120
||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 98 CGTAATGAACTAGTCGTCATTCACAACCATGAAGAGCCAAAGCCTCTGAAGAATCTAGAT 157
Query 121 GGACAATTCTGTGAGATATGTGGAGATCAGATTGGTTTGACAGTAGACGGAGACCTCTTC 180
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 158 GGACAATTCTGTGAGATATGTGGAGATCAGATTGGTTTAACAGTAGAAGGAGACCTCTTC 217
Query 181 GTTGCTTGCAATGAGTGTGGTTTTCCGGCGTGTAGGCCTTGCTATGAGTACGAGAGAAGA 240
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 218 GTAGCTTGCAATGAGTGTGGTTTTCCGGCGTGTAGACCTTGCTATGAGTACGAGAGAAGA 277
Query 241 GAAGGTACACAGAACTGTCCTCAGTGTAAGACTCGTTACAAGCGTCTCAGAGGAAGCCCA 300
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 278 GAAGGAACACAAAACTGTCCTCAGTGTAAGACTCGTTACAAGCGTCTCAGAGGAAGCCCA 337
Query 301 CGTGTGGAGGGAGATGAGGATGAAGAAGATATTGATGATATTGAGTATGAGTTTAATATC 360
| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct 338 AGAGTGGAGGGAGATGAAGACGAAGAAGATATTGATGATATTGAGTATGAATTTAATATC 397
Query 361 GAACATGAACAAGATAAGCAGAAGCATTCTGCTGAGGCTATGCTTTATGGGAAAATGAGC 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 398 GAACATGAACAAGATAAGCATAAGCATTCTGCTGAGGCTATGCTTTATGGGAAAATGAGC 457
Query 421 TATGGAAGAGGTCCTGAGGATGATGAGAACGGGAGATTCCCACCTGTTATAGCCGGTGGA 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 458 TATGGAAGAGGTCCTGAGGATGATGAGAATGGGAGATTCCCACCTGTTATAGCTGGTGGT 517
Query 481 CATAGTGGAGAATTCCCTGTTGGAGGAGGCTATGGGAATGGAGAACATGGGCTTCATAAA 540
|||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||
Sbjct 518 CATAGTGGAGAATTTCCAGTTGGAGGAGGTTATGGTAATGGAGAACATGGGCTTCATAAG 577
Query 541 CGTGTCCACCCATATCCATCATCTGAAGCTGGGAGTGAGGGAGGATGGCGGGAAAGAATG 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 578 CGTGTGCACCCATATCCATCATCTGAAGCTGGGAGTGAGGGAGGATGGCGGGAAAGAATG 637
Query 601 GATGACTGGAAGCTCCAGCATGGGAATCTTGGGCCAGAACCAGATGATGATCCTGAGATG 660
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 638 GATGACTGGAAGCTCCAGCATGGAAATCTTGGGCCAGAACCAGATGATGATCCTGAGATG 697
Query 661 GGACTGATTGACGAAGCACGGCAGCCACTCTCGCGGAAAGTTCCCATTGCCTCAAGCAAG 720
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 698 GGACTGATCGACGAGGCACGGCAGCCACTCTCGCGGAAAGTTCCCATTGCCTCAAGCAAG 757
Query 721 ATCAATCCATATCGGATGGTCATCGTGGCTAGGCTTGTGATTCTAGCAGTTTTTCTACGG 780
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 758 ATCAATCCATATCGGATGGTCATCGTCGCTAGGCTTGTGATTCTAGCAGTTTTTCTGCGG 817
Query 781 TATAGGCTCTTGAACCCAGTGCATGATGCTCTGGGGTTATGGCTGACCTCTGTGATCTGT 840
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 818 TATAGGCTCTTGAATCCAGTGCATGATGCTCTGGGATTATGGCTGACCTCTGTGATCTGT 877
Query 841 GAAATCTGGTTCGCTGTCTCTTGGATTCTTGATCAGTTTCCCAAGTGGTTCCCCATTGAA 900
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 878 GAAATCTGGTTCGCTGTCTCTTGGATTCTTGATCAGTTCCCCAAGTGGTTCCCTATTGAA 937
Query 901 CGTGAGACCTATCTAGATCGGCTTTCCCTCAGGTACGAGAGAGAAGGTGAACCAAATATG 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 CGTGAGACCTATCTAGATCGGCTTTCCCTCAGGTACGAGAGAGAAGGTGAACCAAATATG 997
Query 961 CTTGCCCCTGTAGATGTCTTTGTCAGTACGGTAGACCCGCTGAAGGAACCTCCCCTCGTC 1020
|||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||
Sbjct 998 CTTGCCCCTGTAGATGTCTTTGTCAGTACGGTGGACCCATTGAAGGAGCCTCCCCTCGTC 1057
Query 1021 ACATCCAACACTGTGCTTTCAATCTTGGCCATGGACTACCCAGTTGAGAAAATCTCCTGC 1080
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1058 ACATCCAACACTGTGCTGTCAATCTTGGCCATGGACTACCCAGTTGAGAAAATCTCCTGC 1117
Query 1081 TATGTCTCTGACGATGGTGCTTCAATGCTCACATTCGAATCTCTCTCGGAAACTGCCGAG 1140
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 1118 TATGTCTCTGACGACGGTGCTTCAATGCTTACATTCGAATCTCTCTCGGAAACTGCTGAG 1177
Query 1141 TTTGCAAGGAAATGGGTTCCCTTCTGTAAGAAATTCTCCATAGAGCCACGGGCACCAGAG 1200
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1178 TTTGCAAGAAAATGGGTTCCCTTCTGTAAGAAATTCTCCATAGAGCCACGGGCACCGGAG 1237
Query 1201 ATGTACTTCACGTTGAAAATTGATTATCTCCAGGACAAAGTCCACCCAACGTTTGTTAAG 1260
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 1238 ATGTACTTCACGTTGAAAGTTGATTATCTCCAGGACAAAGTCCACCCAACATTTGTTAAG 1297
Query 1261 GAACGTCGAGCCATGAAGAGAGAATATGAGGAGTTCAAGGTCAGGATCAACGCTCTCGTG 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1298 GAACGTCGAGCCATGAAGAGAGAATATGAGGAGTTCAAGGTCAGGATCAACGCTCAAGTG 1357
Query 1321 GCTAAGGCCTCAAAGGTTCCTCTAGAAGGTTGGATCATGCAAGATGGAACACCATGGCCA 1380
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1358 GCGAAGGCCTCAAAGGTTCCTCTAGAAGGTTGGATCATGCAAGATGGAACACCGTGGCCA 1417
Query 1381 GGGAACAACACCAAGGACCACCCCGGTATGATCCAGGTCTTCCTCGGCCACAGCGGAGGA 1440
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1418 GGGAACAACACCAAGGACCACCCCGGTATGATCCAAGTCTTCCTCGGCCACAGCGGAGGA 1477
Query 1441 TTTGATGTCGAAGGCCACGAACTTCCTCGGCTTGTGTACGTGTCCCGGGAGAAGCGTCCT 1500
|||||||||||||| || || |||||||||||||||||||||||||| ||||||||||||
Sbjct 1478 TTTGATGTCGAAGGGCATGAGCTTCCTCGGCTTGTGTACGTGTCCCGTGAGAAGCGTCCT 1537
Query 1501 GGTTTTCAGCACCACAAGAAAGCTGGTGCCATGAACGCCCTGGTTCGAGTGGCAGGCGTA 1560
|||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1538 GGTTTTCAACACCACAAGAAAGCTGGCGCCATGAATGCCCTGGTTCGAGTGGCAGGCGTA 1597
Query 1561 CTCACAAATGCTCCTTTCATGCTGAACTTGGACTGTGATCACTATGTGAACAACAGCAAG 1620
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1598 CTCACAAATGCTCCTTTCATGCTGAACTTGGACTGTGATCACTATGTAAACAACAGCAAG 1657
Query 1621 GCCGTGAGGGAAGCAATGTGTTTTTTGATGGATCCTCAGATTGGAAAGAAGGTCTGCTAT 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1658 GCCGTGAGGGAAGCAATGTGTTTTTTGATGGATCCTCAGATTGGAAAGAAGGTCTGCTAT 1717
Query 1681 GTTCAGTTCCCTCAAAGGTTCGACGGTATTGACACGCACGATCGTTACGCCAACAGAAAC 1740
|||||||||||||||||||| || || |||||||| |||||||||||||||||||||||
Sbjct 1718 GTTCAGTTCCCTCAAAGGTTTGATGGCATTGACACAAACGATCGTTACGCCAACAGAAAC 1777
Query 1741 ACAGTCTTCTTTGATATCAATATGAAAGGTCTAGATGGAATCCAAGGTCCAGTTTATGTT 1800
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1778 ACAGTCTTCTTTGATATCAATATGAAAGGTCTAGATGGAATCCAAGGTCCAGTTTACGTT 1837
Query 1801 GGTACTGGTTGTGTTTTCAAACGACAAGCTCTGTATGGTTATGAACCACCAAAGGGTCCT 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1838 GGTACTGGTTGTGTTTTCAAACGACAAGCTCTGTATGGTTATGAACCACCAAAGGGTCCT 1897
Query 1861 AAACGTCCAAAGATGATTAGCTGTGGTTGTTGTCCTTGCTTTGGGCGCCGGAGAAAGAAT 1920
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1898 AAACGTCCAAAGATGATAAGCTGTGGTTGTTGTCCTTGCTTTGGGCGCCGGAGAAAGAAT 1957
Query 1921 AAG---TTTTCCAAGAATGACATGAATGGTGACGTAGCAGCCCTTGGAGGAGCAGAAGGT 1977
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1958 AAGAAATTTTCCAAGAATGACATGAATGGTGACGTAGCAGCCCTTGGAGGAGCAGAAGGT 2017
Query 1978 GATAAGGAGCATTTGATGTCTGAAATGAACTTTGAGAAAA-AGTTTGGGCAATCATCCAT 2036
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 2018 GATAAGGAGCATTTGATGTCTGAAATGAACTTTGAGAAAACA-TTTGGGCAATCATCCAT 2076
Query 2037 CTTTGTAACCTCGACTTTGATGGAAGAAGGTGGCGTTCCTCCGTCATCAAGTCCTGCAGT 2096
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2077 CTTTGTAACCTCAACTTTGATGGAAGAAGGTGGTGTTCCTCCGTCATCAAGTCCTGCAGT 2136
Query 2097 GCTCCTTAAGGAGGCAATCCATGTCATAAGCTGCGGTTATGAAGACAAGACTGAGTGGGG 2156
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2137 GCTCCTTAAAGAGGCAATCCATGTCATAAGCTGCGGTTATGAAGACAAGACTGAGTGGGG 2196
Query 2157 AACTGAGCTGGGTTGGATCTATGGCTCTATCACAGAGGATATTTTGACGGGTTTCAAGAT 2216
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2197 AACTGAGCTGGGTTGGATCTATGGCTCTATCACAGAGGATATTTTGACGGGATTCAAGAT 2256
Query 2217 GCATTGTCGTGGCTGGAGGTCTATTTACTGCATGCCTAAGAGGCCTGCATTCAAAGGTTC 2276
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2257 GCATTGCCGTGGATGGAGGTCTATTTACTGCATGCCTAAGAGGCCTGCATTCAAAGGTTC 2316
Query 2277 AGCTCCTATTAATCTATCAGACAGGTTAAACCAGGTTTTGCGTTGGGCACTCGGATCTGT 2336
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 2317 AGCTCCTATTAATCTATCAGACAGGTTAAACCAGGTTTTGCGTTGGGCACTTGGATCGGT 2376
Query 2337 TGAGATATTTTTCAGCCGGCACAGTCCTCTCTGGTATGGCTACAAAGGAGGCAAACTCAA 2396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2377 TGAGATATTTTTCAGCCGGCACAGTCCTCTCTGGTATGGCTACAAAGGAGGCAAACTCAA 2436
Query 2397 GTGGCTTGAGCGTTTTGCTTATGCCAACACAACAATCTACCCGTTCACATCTATACCACT 2456
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2437 GTGGCTTGAGCGTTTTGCTTATGCCAACACAACAATCTACCCCTTCACATCTATACCACT 2496
Query 2457 CCTTGCGTACTGTATCCTTCCAGCCATCTGTCTCCTTACTGACAAATTCATCATGCCCCC 2516
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2497 TCTTGCCTACTGTATCCTTCCAGCCATCTGTCTCCTTACTGACAAATTCATCATGCCACC 2556
Query 2517 GATAAGCACATTCGCTAGTCTCTTCTTCATATCATTGTTTATGTCGATCATTGTAACGGG 2576
|||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 2557 GATAAGCACATTTGCTAGTCTCTTCTTCATCTCACTGTTTATGTCGATCATTGTAACGGG 2616
Query 2577 AATCTTGGAATTGAGATGGAGTGGAGTTAGCATTGAGGAATGGTGGAGAAACGAGCAATT 2636
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2617 AATCTTGGAATTGAGATGGAGCGGAGTTAGCATTGAGGAATGGTGGAGAAACGAGCAATT 2676
Query 2637 CTGGGTCATTGGAGGAATCTCAGCTCATCTCTTTGCTGTTGTCCAAGGTCTCCTCAAAAT 2696
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2677 CTGGGTCATTGGAGGAATCTCAGCTCATCTCTTTGCGGTTGTCCAAGGTCTCCTCAAAAT 2736
Query 2697 CTTAGCAGGCATTGACACAAACTTCACAGTCACATCAAAGGCAACAGATGATGATGACTT 2756
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2737 CTTAGCAGGCATTGACACAAACTTCACCGTCACATCAAAGGCAACAGATGATGATGACTT 2796
Query 2757 TGGAGAACTTTACGCGTTCAAATGGACAACACTGCTTATCCCTCCAACAACTGTCTTAAT 2816
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2797 TGGAGAACTTTACGCATTCAAATGGACAACACTGCTGATCCCTCCAACAACTGTCTTAAT 2856
Query 2817 CATAAACATTGTCGGCGTTGTTGCAGGCATCTCAGATGCCATTAACAATGGATACCAGTC 2876
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2857 CATAAACATTGTTGGCGTTGTTGCAGGCATCTCAGATGCCATTAACAATGGATATCAGTC 2916
Query 2877 TTGGGGACCTCTATTTGGTAAACTCTTCTTCTCCTTTTGGGTCATTGTTCATCTCTACCC 2936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2917 TTGGGGACCTCTATTTGGTAAACTCTTCTTCTCCTTTTGGGTCATTGTTCATCTCTACCC 2976
Query 2937 ATTCCTCAAAGGTCTGATGGGAAGACAGAACAGAACACCAACCATTGTGGTGATTTGGTC 2996
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2977 ATTCCTCAAAGGTCTGATGGGTAGACAGAACAGAACACCAACCATTGTGGTGATTTGGTC 3036
Query 2997 AGTGTTATTGGCATCGATCTTCTCTTTGCTTTGGGTCAGAATTGATCCTTTTGTGCTCAA 3056
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3037 AGTGTTATTGGCATCTATCTTCTCTTTGCTTTGGGTAAGAATTGATCCTTTTGTGCTCAA 3096
Query 3057 GACCAAAGGACCTGACACTTCCAAGTGTGGCATCAACTGCTGAAGCAAAATCTTTTTC 3114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3097 GACCAAAGGACCTGACACTTCCAAGTGTGGCATCAACTGCTGAAGCAAAATCTTTTTC 3154
> AT4G18780.1 | Symbols: CESA8, IRX1, ATCESA8, LEW2 | cellulose
synthase family protein | chr4:10312624-10316790 REVERSE LENGTH=3251
Length=3251
Score = 444 bits (240), Expect = 3e-123
Identities = 699/915 (76%), Gaps = 54/915 (6%)
Strand=Plus/Plus
Query 2097 GCTCCTTAAGGAGGCAATCCATGTCATAAGCTGCGGTTATGAAGACAAGACTGAGTGGGG 2156
|||| | || || || || |||||||| ||||| || || ||||| || ||||| |||||
Sbjct 2021 GCTCATCAAAGAAGCTATTCATGTCATTAGCTGTGGATACGAAGAGAAAACTGAATGGGG 2080
Query 2157 AACTGAGCTGGGTTGGATCTATGGCTCTATCACAGAGGATATTTTGACGGGTTTCAAGAT 2216
|| || | || ||||| || || || ||||| || || ||||||||||||||||||||
Sbjct 2081 AAAAGAAATAGGATGGATTTACGGGTCGATCACCGAAGACATTTTGACGGGTTTCAAGAT 2140
Query 2217 GCATTGTCGTGGCTGGAGGTCTATTTACTGCATGCC-T-AAGAGGCCTGCATTCAAAGGT 2274
|||||||||||| |||||||| |||||||| ||||| | |||| || ||||| |||||
Sbjct 2141 GCATTGTCGTGGATGGAGGTCGATTTACTGTATGCCATTAAGA--CCAGCATTTAAAGGA 2198
Query 2275 TCAGCTCCTATTAATCTATCAGACAGG-TTAAACCAGGTTTTGCGTTGGGCACTCGGATC 2333
|| ||||| || ||||||||||| ||| || | ||||||| | |||||||| || || ||
Sbjct 2199 TCTGCTCCAATCAATCTATCAGATAGGCTTCA-CCAGGTTCTACGTTGGGCTCTTGGCTC 2257
Query 2334 TGTTGAGATATTT-TTCAGCCGGCACAGTCCTCTCTGGTATGGCTACAAAGGAGGCAAAC 2392
|||||||| || || ||||| || ||||| | ||||| || | || |||||| |
Sbjct 2258 GGTTGAGATCTTCCTT-AGCCGACATTGTCCTTTGTGGTACGGTTGCAGCGGAGGCCGCC 2316
Query 2393 TCAAGTGGCTTGAGCGTTTTGCTTATGCCAACACAACAATCTACCCGTTCACATCTATAC 2452
|||||| ||| || | || |||||| ||||| | ||||||| ||||| ||| | |
Sbjct 2317 TCAAGTTGCTCCAGAGATTAGCTTATATAAACACTATTGTCTACCCATTCACTTCTTTGC 2376
Query 2453 CACTCCTTGCGTACTGTA-TCCTTCCAGCCATCTGTCTCCTTACTGACAAATTCATCATG 2511
| || |||| ||||||| || ||||||| || || || ||||| | |||||| |||||
Sbjct 2377 CTCTTGTTGCTTACTGTACTC-TTCCAGCTATTTGCCTTCTTACCGGCAAATTTATCAT- 2434
Query 2512 CCCC-CGATAAGCACAT-TCGCTAGTC-T-CT-TCTTCATA--TCATTGTTTATGTCGAT 2564
||| || || || | | || || | | || | ||| || || | ||||| || ||
Sbjct 2435 CCCAACGCTAT-CAAACCTAGCAAG-CATGCTGT-TTC-TAGGTC-TC-TTTATATCAAT 2488
Query 2565 CAT-TGTAACGGGAATCTTGGAA-TTGAGATGGAGTGGAGTTAGCATTGAGGAATGGTGG 2622
||| | ||||| | || | || || ||||||| ||||| || || || || | |||
Sbjct 2489 CATCT-TAACGAGTGTCCTCGAGCTTC-GATGGAGCGGAGTCAGTATCGAAGACTTATGG 2546
Query 2623 AGAAACGAGCAATTCTGGGTCATTGGAGGAATCTCAGCTCATCTCTTTGCTGTTGTCCAA 2682
|||||||| || || ||||| |||||||| ||||||||||||||||||| ||| |||||
Sbjct 2547 AGAAACGAACAGTTTTGGGTTATTGGAGGTGTCTCAGCTCATCTCTTTGCCGTTTTCCAA 2606
Query 2683 GG-TCTCCTCAAAAT-CTTAGCAGG-CATTGACACAAACTTCACAGTCACATC-AAAGGC 2738
|| | |||||||||| || || || | | |||||||| |||||||||||||| ||| |
Sbjct 2607 GGAT-TCCTCAAAATGCTC-GCTGGTC-TCGACACAAATTTCACAGTCACATCGAAAACC 2663
Query 2739 AACAGATGATG-ATGACTTTGGAGAACTTTACGC-GTTCAAATGGACAACACTGCTT-AT 2795
|||||||| | || || || || |||||| || |||||||||||| || ||| ||
Sbjct 2664 G-CAGATGATTTA-GAATTCGGTGAGCTTTACATTGT-CAAATGGACAACTCT-CTTGAT 2719
Query 2796 CCCTCCAACA--ACTGTCTTAATCATAAACATTG-TCGGCGTTGTTGCAGGCAT-CTCAG 2851
|||||| || ||| ||||| | || ||| ||| |||| |||||||| || || ||| |
Sbjct 2720 CCCTCCGACGTCACT-TCTTA-TAATCAAC-TTGGTCGGAGTTGTTGCTGG-ATTCTCTG 2775
Query 2852 ATGC-CATTAACAATGGATACCA-GTCTTGGGGACCTCTATTTGGTAAACTCTTCTTCTC 2909
| || | ||||||| || || | | ||||||||||| | ||||| || | || ||| |
Sbjct 2776 ACGCTC-TTAACAAAGGTTATGAAG-CTTGGGGACCTTTGTTTGGGAAGGTATTTTTCGC 2833
Query 2910 CTTTTGGGTCATTGTTCATCTCTACCCATTCCTCAAAGGTCTGATGGGAAGACAGAACAG 2969
||||||||| ||| ||||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct 2834 CTTTTGGGTGATTCTTCATCTTTATCCATTCCTCAAAGGTCTTATGGGAAGACAAAACAG 2893
Query 2970 AACACCAACCATTGT 2984
|||||| || |||||
Sbjct 2894 AACACCTACTATTGT 2908
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 155116187756
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5