BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941399 Length=3269 Score E Sequences producing significant alignments: (Bits) Value AT5G18740.1 | Symbols: | Domain of unknown function (DUF3444) ... 599 6e-170 AT5G18720.1 | Symbols: | Domain of unknown function (DUF3444) ... 566 6e-160 AT5G18730.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Molecular... 425 1e-117 > AT5G18740.1 | Symbols: | Domain of unknown function (DUF3444) | chr5:6249727-6252042 FORWARD LENGTH=2099 Length=2099 Score = 599 bits (324), Expect = 6e-170 Identities = 714/895 (80%), Gaps = 56/895 (6%) Strand=Plus/Plus Query 2124 CACTGGTCATATT-GCTGTCAT-CCCAAGAAAAGGCGAGACTTGGGC-ATTGTTCAAGAA 2180 |||| ||||| || | ||| || ||| ||| |||||||||| ||||| || |||||||| Sbjct 968 CACTTGTCATTTTAG-TGT-ATCCCCTAGAGAAGGCGAGACATGGGCGCTT-TTCAAGAA 1024 Query 2181 CTGGGATATTAACTGGTCTTCAGAGCCAGATTCTCACCGCAAATCTGAGTATGAATTTGT 2240 |||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 1025 CTGGGATATTAAGTGGTCTTCAGAGCCAGATTCTCACCGCAAATATGAGTACGAATTTGT 1084 Query 2241 CGAAATTTTGTCAGATTACGCTGATGGAGCTGGTGTATCTGTTGCGTTCTTGCATAAAGC 2300 ||| ||| |||||||||||||||||| ||||||||||| |||||| | ||| |||||||| Sbjct 1085 CGAGATTCTGTCAGATTACGCTGATGAAGCTGGTGTATATGTTGCATACTTACATAAAGC 1144 Query 2301 AAAAGGCTTTGCAAGTGTGTTCTTTCGATTGGGAACTAGTAATGCAGACATATCGCAG-A 2359 |||||| ||||| ||||||||| | ||| |||||||| || ||| || |||| | | | Sbjct 1145 AAAAGGATTTGCTAGTGTGTTCCTCCGAATGGGAACTGGTTATGAAGGTATATTTC-GTA 1203 Query 2360 TTCTACCTCACAGTTTATATCGGTTCTCCCATAGGATTCCTTCCTTCAACCTGACTGGAA 2419 || |||||| |||||| |||||||||||||||||| | ||||||||||| ||||| ||| Sbjct 1204 TTTTACCTCGCAGTTTGTATCGGTTCTCCCATAGGGTCCCTTCCTTCAAACTGACAGGAG 1263 Query 2420 TTGCA-GGAAAAGGTATGCCAAAAGATGCTTACGAGCTGGACCAAGCT-CTATTACCTGA 2477 | | | ||||||| |||||||||||||||||| ||||| ||||||||| | ||||| || Sbjct 1264 T-GAAAGGAAAAGATATGCCAAAAGATGCTTATGAGCTAGACCAAGCTGCC-TTACCAGA 1321 Query 2478 AACAATCGATGAGATAATTGTCCCTCCACA-TCT-ATTAGCAG-A----GCCTAAAC-CA 2529 |||||| || ||||| ||||| ||| || | ||| | |||| | | |||||| | Sbjct 1322 AACAATTGAAGAGATCATTGTGCCTTCAAACTCTGAG-AGCAATATAAAGTCTAAACGCC 1380 Query 2530 GAAGCTC-TCTACTTTCCTCGTGATGGAAAGGTTTTCCAAACTGGCCAGATCTGGTCATT 2588 |||| | ||||| || || | | ||| ||||||| || |||||||||||||||||||| Sbjct 1381 -AAGC-CATCTACATTGCTAGCAAGGGATAGGTTTTTCAGACTGGCCAGATCTGGTCATT 1438 Query 2589 TTACTA-TGGTAACGTTAACTTGCCTCTATACTACTG-TAGGATACA-AAGGATCACTTT 2645 |||| | |||| | | | | |||||||| ||||| || |||||| || ||| |||||||| Sbjct 1439 TTAC-AGTGGTTATGATGATTTGCCTCTGTACTA-TGGTAGGATTCAGAAG-ATCACTTT 1495 Query 2646 AACTCAGGCATTCGAGCAGGAAGCAG-AATTTAAACTAT-CTGTAAGTCGGTTAAAGACT 2703 ||||||||||| ||||||| | | |||| |||||| | || ||||| ||||| || Sbjct 1496 TACTCAGGCATTTAAGCAGGACCCTGTAATT-AAACTACACA-TAGGTCGGCTAAAGGCT 1553 Query 2704 AATCCTTTCCC-TGAGAATGTCATTC-AGTGGGAGGACAAG-AGAATGCCTGTTGGCTGT 2760 | || ||||| | || |||| || | | ||||| |||| | | |||||||||||| ||| Sbjct 1554 AC-CCATTCCCCTAAGGATGTTAT-CGACTGGGAAGACAGGCA-AATGCCTGTTGGTTGT 1610 Query 2761 GGAACTTTCT-CGGTGAGGAAATGTT-TCGAAGTACTCACTCCAGATGATGTTTTACATC 2818 ||||| |||| | | | |||| ||| | ||| || |||| ||| |||| |||| ||||| Sbjct 1611 GGAACATTCTAC--TCAAGAAACGTTCTAGAAATAATCACCCCAAATGAGGTTTCACATC 1668 Query 2819 AGATAGTGTC-TCAAACCTCCATGGATGGAAATGATTATACCATTCTTCCCAAGATTGGG 2877 || |||| || ||||||||| |||||||| | ||| ||||| ||||| ||||||||||| Sbjct 1669 AGGTAGT-TCCTCAAACCTCAATGGATGGCATTGAATATACTATTCTACCCAAGATTGGT 1727 Query 2878 GATGTTTGGGCCATATACAGATTCTGGACTTGTCACAAGGA-GTTCAAGGACATTGG--T 2934 || ||| || |||||||||| ||||| | ||| | || ||| | |||| |||| | Sbjct 1728 GAACTTTAGGTGATATACAGATACTGGAGTAGTCTTATTGATGTTGA-GGAC-TTGGAGT 1785 Query 2935 TCCTGCAGCT--ATGACATTGTCGAAGTTCTTGATGACACTGTGGACTATAAGGT 2987 | || || ||||||| || |||||||||||||||||| ||||||||||||| Sbjct 1786 T--TGGT-CTTTATGACATGGTTGAAGTTCTTGATGACACTTTGGACTATAAGGT 1837 Score = 329 bits (178), Expect = 8e-89 Identities = 331/404 (82%), Gaps = 14/404 (3%) Strand=Plus/Plus Query 1705 CAAGATGCTCAAGTGGGGGCTGCAATGGGGATCTCTCTG-AATCTCGAGGCAGATAAAAA 1763 ||| ||||||||||||| |||| | |||| | ||||| | ||||| |||| ||| |||| Sbjct 508 CAA-ATGCTCAAGTGGGAGCTGTAGTGGGAAACTCTC-GAAATCTTGAGGTGGATCAAAA 565 Query 1764 CTCTGGTTTTTGTGA-T-AAAAGTTTAGAAGTTGTAGTACAACCAACGACCTCTGAATGT 1821 |||||||| ||||| | | || | || || |||||||| || || || |||| || | Sbjct 566 TTCTGGTTTATGTGATTCAGAA--TCAGGAGGTGTAGTACCACAAAAGATTTCTGGATTT 623 Query 1822 GCCGGTCT-AAAGATCAATGACTTTGATAAACTGAGGGAAGAAGTAAAATTTGCAGTTGG 1880 || ||| | ||| | || ||||||||||| ||||||||||||||||| || | |||||| Sbjct 624 GCTGGTTTGAAA-TTTAACGACTTTGATAAGCTGAGGGAAGAAGTAAACTTCGAAGTTGG 682 Query 1881 CCAGGCCTGGGCTCTTTATGATACA---GATGGGATGCCTCGATTGTATGCTCTGATCAG 1937 ||| |||||||| ||| |||| || ||||| |||||| ||||||||||| ||||| Sbjct 683 GCAGACCTGGGCTATTTTTGATCCAGTGGATGGAATGCCTAGATTGTATGCTAAGATCAT 742 Query 1938 AAAAGTTTCATCTCCTTGTTTTCGG-CTTAGGATCACATATCTAGAGCCAGTTCCAGGTA 1996 |||||||||| ||||||||||| || |||||||| |||||||||||||||| ||||| | Sbjct 743 AAAAGTTTCAGCTCCTTGTTTT-GGTCTTAGGATTACATATCTAGAGCCAGATCCAGATG 801 Query 1997 ACGAGAAAGAGATCCAATGGTTTGAAGAAAACTTGCCTGTTTCTGTTGGTAACTTCAGGC 2056 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 802 GTGAGAAAGAGCTCCAATGGTTTGAAGAAGACTTGCCTGTTTCTGTTGGTAACTTCAGGC 861 Query 2057 TTGGGAAAAATCTGAACACAAAAGATCGTTCCATATTCTCTCAT 2100 ||||| ||||| | |||| |||||||||| ||||| || ||| Sbjct 862 TTGGGGAAAATAAGTGCACACAAGATCGTTCAATATTTTCACAT 905 > AT5G18720.1 | Symbols: | Domain of unknown function (DUF3444) | chr5:6244005-6246227 FORWARD LENGTH=1838 Length=1838 Score = 566 bits (306), Expect = 6e-160 Identities = 689/868 (79%), Gaps = 49/868 (6%) Strand=Plus/Plus Query 2145 CCCAAGAAAAGGCGAGACTTGGGC-ATTGTTCAAGAACTGGGATATTAACTGGTCTTCAG 2203 ||| ||||| || ||||||||||| || |||||||||||||||||||| ||||||| | Sbjct 672 CCCTAGAAATGGAGAGACTTGGGCGCTT-TTCAAGAACTGGGATATTAAGTGGTCTTTAA 730 Query 2204 AGCCAGATTCTCACCGCAAATCTGAGTATGAATTTGTCGAA-ATTTTGTCAGATTACGCT 2262 | ||||||||||||||||||| |||||||||||||||| || ||| |||||||||||||| Sbjct 731 AACCAGATTCTCACCGCAAATATGAGTATGAATTTGTC-AAGATTCTGTCAGATTACGCT 789 Query 2263 GATGGAGCTGGTGTATCTGTTGCGTTCTTGCATAAAGCAAAAGGCTTTGCAAGTGTGTTC 2322 |||| | ||||||||| |||||| | |||||||||||||||||| ||||| ||||||||| Sbjct 790 GATGAAACTGGTGTATATGTTGCATACTTGCATAAAGCAAAAGGATTTGCTAGTGTGTTC 849 Query 2323 TTTCGATTGGGAACTA-GTAATGCAGACATATCGCAG-ATTCTACCTCACAGTTTATATC 2380 |||||| |||||| | || ||| || |||| | | ||| ||||||| ||||| |||| Sbjct 850 TTTCGAATGGGAA-GAGGTTATGAAGGTATATTTC-GTATTTTACCTCAGAGTTTGTATC 907 Query 2381 GGTTCTCCCATAGGATTCCTTCCTTCAACCTGACTGGAATTGCAGGAAAAGGTATGCCAA 2440 ||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| Sbjct 908 GGTTCTCCCATAGGATTCCTTCCTT-----TGACTGGAATTGAAGGAAAAGGTGTGCCAA 962 Query 2441 AAGATGCTTACGAGCTGGACCAAGCT-CTATTACCTGAAACAATCGATGAGATAATTGTC 2499 |||||||||||||||||||| ||||| | ||||| ||||||||||| ||| | || || Sbjct 963 AAGATGCTTACGAGCTGGACAAAGCTGCG-TTACCAGAAACAATCGAAGAGTTCATCGTG 1021 Query 2500 CCTCCACA-TCT-AT--TAGCAGA--GCCTAAAC-CAGAAGCTCTCTACTTTCCTCGTGA 2552 ||| | | ||| | || | | | |||||| | ||| | | |||||| || | | Sbjct 1022 CCTTTAGACTCTGAGAGTAATATAAAGTCTAAACGCC-AAGATATATACTTTGCTAGCAA 1080 Query 2553 TGGAAAGGTTTTCCAAACTGGCCAGATCTGGTCATTTTACTATGGTAACG-TTAACTT-G 2610 || || ||||| | ||||||||||| ||||||||||||| |||| | | || ||| | Sbjct 1081 GGGTAATGTTTTTCTGACTGGCCAGATTTGGTCATTTTACTGTGGTGATGATT--CTTTG 1138 Query 2611 CCTCTATACTACTGTAGGATACA-AAGGATCACTTTAACTCAGGCATTCGA-GCAGGAAG 2668 ||||| |||||| ||||||| || ||| |||||||| || |||||||| | |||||| Sbjct 1139 CCTCTGTACTACGGTAGGATTCAGAAG-ATCACTTTTACCCAGGCATTT-ATGCAGGATC 1196 Query 2669 CAGAATTTAAACTATC-TGTAAGTCGGTTAAAGACTAATCCTTTCCCTGAGAATGTCATT 2727 | | || |||| || | | || ||||| ||||| ||| || |||||||| | |||| || Sbjct 1197 CTGTATGTAAATTA-CATATAGGTCGGCTAAAGGCTACTCGTTTCCCTGCGGATGTTAT- 1254 Query 2728 C-AGTGGGAGGACAAGAGAATGCCTGTTGGCTGTGGAACTTTCT-CGGTGAGGAAATGTT 2785 | | ||||| ||||| ||| ||||||||| ||||||||||||| || || ||| | | Sbjct 1255 CGACTGGGAAAACAAGGGAACGCCTGTTGGTTGTGGAACTTTCTACGCA-AGAAAA-GCT 1312 Query 2786 -TCGAAGTACTCACTCCA-GATGATGTTTTACATCAGATAGTGTC-TCAAACCTCCATGG 2842 | ||| || |||| ||| | ||| |||| || ||||||| || ||||||||| || | Sbjct 1313 CTAGAAATAATCACCCCAAG-TGAGGTTTCACTTCAGATAAC-TCCTCAAACCTCTATTG 1370 Query 2843 ATGGAAATGATTATACCATTCTTCCCAAGATTGGGGATGTTTGGGCCATATACAGATTCT 2902 |||| | ||| ||||||||||| ||||||||||| || ||||||| ||||||| || || Sbjct 1371 ATGGCATTGAATATACCATTCTCCCCAAGATTGGCGAAGTTTGGGTGATATACAAATACT 1430 Query 2903 GGACTTGTCACAAGGAGTTCA-AGGACATTGGTTCCTGCAGCT-ATGACATTGTCGAAGT 2960 ||| | || ||| ||| | || ||||| || ||| ||| || || ||||||| ||| | Sbjct 1431 GGAGTCGTGACATGGA-TGCAGAGGACTTTAGTTT-TGCTTCTTATAACATTGTTGAAAT 1488 Query 2961 TCTTGATGACAC-TGTGGACTATAAGGT 2987 |||||||||||| | |||| |||||||| Sbjct 1489 TCTTGATGACACCT-TGGAGTATAAGGT 1515 Score = 285 bits (154), Expect = 2e-75 Identities = 242/283 (86%), Gaps = 11/283 (4%) Strand=Plus/Plus Query 1825 GGTCTAAAGATCAATGACTTTGA-TAAACTGAGGGAAGAAGTAAAATTTGCAGTTGGCCA 1883 |||| |||| | || |||||| | ||| ||||||||||||| ||| ||| |||||| || Sbjct 310 GGTCCAAAGTTTAACGACTTT-AGTAAGCTGAGGGAAGAAGCAAACTTTAAAGTTGGTCA 368 Query 1884 GGCCTGGGCTCTTTATGATAC-A--GATGGGATGCCTCGATTGTATGCTCTGATCAGAAA 1940 | ||||||| ||||||||||| | |||||||||||| |||||||||||| |||||| || Sbjct 369 GACCTGGGCGCTTTATGATACAATGGATGGGATGCCTAGATTGTATGCTCAGATCAGGAA 428 Query 1941 AGTTTCATCTCCTTGTTTTCGG-CTTAGGATCACATATCTAGAGCCAG-TTCCAGGTAAC 1998 ||||||| ||||||||||| || |||| ||| |||||||||||||||| || || | | Sbjct 429 AGTTTCAGCTCCTTGTTTT-GGTCTTATGATTACATATCTAGAGCCAGATT-CAAATGAT 486 Query 1999 GAGAAAGAGATCCAATGGTTTGAAGAAA-ACTTGCCTGTTTCTGTTGGTAACTTCAGGCT 2057 ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 487 GAGAAAGAGCTCCAATGGTTTGAA-AAAGACTTGCCTGTTTCTGTTGGTAACTTCAGGCT 545 Query 2058 TGGGAAAAATCTGAACACAAAAGATCGTTCCATATTCTCTCAT 2100 |||| ||||| || ||||||||||||||| ||||| || ||| Sbjct 546 TGGGGAAAATAAGAGCACAAAAGATCGTTCAATATTTTCACAT 588 > AT5G18730.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:6246763-6249405 FORWARD LENGTH=2405 Length=2405 Score = 425 bits (230), Expect = 1e-117 Identities = 558/707 (79%), Gaps = 59/707 (8%) Strand=Plus/Plus Query 1411 AAGAATCGAGACACAAATTTCTTTGGAAAGGTAAGTTCCCCA---GATTTGTGCTGTGCT 1467 ||||||| ||||| | ||||||||||||| | || | | || | |||| |||||||| Sbjct 348 AAGAATCCAGACATACATTTCTTTGGAAA--T-AGATGCTCATTTGGTTTGAGCTGTGCT 404 Query 1468 ATG-AATGTTGATGAGAAGACAAAGTGGGATGAGTATTGTGAAGATT-TTAATACTGAAA 1525 | || |||| |||||||| |||| || |||||||| ||||| ||| || ||||||||| Sbjct 405 -GGTAAGGTTGGTGAGAAGAGAAAGAGGAATGAGTATGGTGAA-ATTGTTTATACTGAAA 462 Query 1526 ATTGGAGCAAGGCTGAAGATGTTATCGTAAATCTAAGTAAAGATGGCAATGGAAGACTGT 1585 || | |||||| |||||||||||| |||||||| | | |||||| |||| ||| Sbjct 463 ATCGCAGCAAGCCTGAAGATGTTA-CGTAAATC----T----A-GGCAATAAAAGAGTGT 512 Query 1586 C-GGATGATAATGGAGATGCA-G-G-AGAAGAGTCTGGAAGCGGAAAGCAACTCCATGAG 1641 | || ||||| ||||| |||| | | ||||||||||||||||||||||||||||||||| Sbjct 513 CAGG-TGATATTGGAGGTGCAGGAGAAGAAGAGTCTGGAAGCGGAAAGCAACTCCATGAA 571 Query 1642 GTTTATCTTTGCAAAGAAACGTTGCCAAATGCCATGAACAAGAATGGTCGGCTGAGTATG 1701 || |||||||||||||||| |||||| ||| | | |||| || | ||| Sbjct 572 ATTGATCTTTGCAAAGAAACATTGCCAGATGTCTTTAACA----TG--------A--ATG 617 Query 1702 AAACAAGATGCTCAAGTGGGGGCTGCAATGGGGATCTCTCTGAATCTCGAGGCAGATAAA 1761 | | | ||||||| | ||||||||||||||||| |||||| ||||||||||| Sbjct 618 ---C----T-C--AAGTGGGAGTTGCAATGGGGATCTCTCAGAATCTTGAGGCAGATAAT 667 Query 1762 AACTCTGGTTTT-TGTGATAAAAGTTTAGAAGTTGTAGTACAACCAACGACCTCTGAATG 1820 |||||| |||| |||||| | ||| || || || ||||| || || || |||| ||| Sbjct 668 AACTCTT-TTTTGTGTGATTCAGGTTCAGCAGGTGCAGTACCACAAAAGATTTCTGGATG 726 Query 1821 TGCCGGTCT-AAAGATCAATGACTTTGATAAACTGAGGGAAGAAGTAAAATTTGCAGTTG 1879 ||| ||| | ||| | ||||||||||||| |||||||||| |||||| |||| || || Sbjct 727 TGCTGGTTTGAAATTT-AATGACTTTGATAGGCTGAGGGAAGGAGTAAAGTTTGAAGCTG 785 Query 1880 GCCAGGCCTGGGCTCTTTATGATAC-A-GATGG----GATGCCTCGATTGTATGCTCTGA 1933 | || |||||||| ||||| ||| | | ||| ||||||| |||||||||||| || Sbjct 786 GTCAAACCTGGGCTATTTATAATAATACGGTGGATCAGATGCCTAGATTGTATGCTCAGA 845 Query 1934 TCAGAAAAGTTTCATCTCCTTGTTTTCGGCTTAGGATCACATATCTAGAGCCAGTTCCAG 1993 |||||||||||||| ||||||||||| | |||||||| |||||||||||||||| ||||| Sbjct 846 TCAGAAAAGTTTCAGCTCCTTGTTTTAGTCTTAGGATTACATATCTAGAGCCAGATCCAG 905 Query 1994 GTAACGAGAAAGAGATCCAATGGTTTGAAGAAAACTTGCCTGTTTCTGTTGGTAACTTCA 2053 | |||||||||| |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct 906 ATGGTGAGAAAGAGACCCAATGGTTTGAGGAAGACTTGCCTGTTTCTGTTGGTAAATTCA 965 Query 2054 GGCTTGGGAAAAATCTGAACACAAAAGATCGTTCCATATTCTCTCAT 2100 |||||||| ||||| || |||| |||||||||||||||| || ||| Sbjct 966 GGCTTGGGGAAAATAAGAGCACACAAGATCGTTCCATATTTTCACAT 1012 Score = 244 bits (132), Expect = 3e-63 Identities = 293/366 (80%), Gaps = 29/366 (8%) Strand=Plus/Plus Query 981 TAGGAGTGATTTGCTTG--T-GTTGACACCCAAGAATCAGCACGAAAAAGCTCAAGCTTT 1037 ||||| ||||||| ||| | | |||||||||||| ||||| ||||| ||||||||||| Sbjct 257 TAGGACTGATTTGGTTGCATCGACGACACCCAAGAACCAGCAAGAAAAGGCTCAAGCTTT 316 Query 1038 CTCCTTGCAACAACAGAATAAAGTTCCAAGTAAGAATCCAGGCACCCATTTCTTTGGAAA 1097 |||||||||||||||||| ||||| |||||||||||||||| || |||||||||||||| Sbjct 317 CTCCTTGCAACAACAGAAGAAAGTCCCAAGTAAGAATCCAGACATACATTTCTTTGGAAA 376 Query 1098 TGA-AAGTTC-TCCAGGTTTGAGCTTTGCT-GTGAAGGTTGGTGAGAAGAGAAAGAGGAA 1154 | | | | || | |||||||||| |||| || |||||||||||||||||||||||||| Sbjct 377 T-AGATGCTCAT-TTGGTTTGAGCTGTGCTGGT-AAGGTTGGTGAGAAGAGAAAGAGGAA 433 Query 1155 TGAGTATGGTGAAAGTTGCA-ATACTGAAAATCACAGCAAGT-TGGAAGATGTTATTGGC 1212 |||||||||||||| ||| |||||||||||| ||||||| || ||||||||| | Sbjct 434 TGAGTATGGTGAAA-TTGTTTATACTGAAAATCGCAGCAAGCCTG-AAGATGTTAC-GTA 490 Query 1213 AGTGCTGTACACAATACTAGAAGAG-GAACCAA-TGATAATGAAAATGCAGGAAGGCTAG 1270 | | || | ||||| | ||||| | | | ||||| || | ||||||| | || Sbjct 491 AAT-CT--AGGCAATA--A-AAGAGTGT-C-AGGTGATATTGGAGGTGCAGGA-GA--AG 539 Query 1271 AAGCGTCTGGATGGGGGAAGCAACTTCATGAAGTTGATCGTT-CTGATGAAACATTGCCA 1329 ||| ||||||| | || |||||||| |||||| |||||| || | | |||||||||||| Sbjct 540 AAGAGTCTGGAAGCGGAAAGCAACTCCATGAAATTGATCTTTGCAAA-GAAACATTGCCA 598 Query 1330 AATGTC 1335 ||||| Sbjct 599 GATGTC 604 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 162641229206 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5