BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg941404
Length=2063
Score E
Sequences producing significant alignments: (Bits) Value
AT5G18730.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Molecular... 1640 0.0
AT5G18740.1 | Symbols: | Domain of unknown function (DUF3444) ... 1262 0.0
AT5G18720.1 | Symbols: | Domain of unknown function (DUF3444) ... 1205 0.0
> AT5G18730.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Molecular
chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12; Bacteria
- 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr5:6246763-6249405 FORWARD LENGTH=2405
Length=2405
Score = 1640 bits (888), Expect = 0.0
Identities = 1303/1494 (87%), Gaps = 65/1494 (4%)
Strand=Plus/Plus
Query 54 GATTAGGAGTGATTTGGTTGCATC--C-ACACCTGGGAATCAGCAAGAAAAGGCTCAAGC 110
|||||||| ||||||||||||||| | ||||| ||| ||||||||||||||||||||
Sbjct 254 GATTAGGACTGATTTGGTTGCATCGACGACACCCAAGAACCAGCAAGAAAAGGCTCAAGC 313
Query 111 TTTCTCCTTGCAACAACAG-ATAACAGTCCCAAGTAAGAATCAAGGCATACACTTCTCTG 169
||||||||||||||||||| | || ||||||||||||||||| || |||||| |||| ||
Sbjct 314 TTTCTCCTTGCAACAACAGAAGAA-AGTCCCAAGTAAGAATCCAGACATACATTTCTTTG 372
Query 170 GAAATGA-ATGCTCCCCTGGTTTGAGCCCTGCTGGTAAGGTTGGTGATAAGAGAAAGAGG 228
||||| | |||||| |||||||||| |||||||||||||||||| ||||||||||||
Sbjct 373 GAAAT-AGATGCTCATTTGGTTTGAGCTGTGCTGGTAAGGTTGGTGAGAAGAGAAAGAGG 431
Query 229 AATGAGTACGATGAAATTGTTTACACTGAACATCGCAGTAATTCTGAAGATGTTATTGTA 288
|||||||| | |||||||||||| |||||| ||||||| || |||||||||||| |||
Sbjct 432 AATGAGTATGGTGAAATTGTTTATACTGAAAATCGCAGCAAGCCTGAAGATGTTA-CGTA 490
Query 289 AATCTAGGCAATAAAAGAGTGTCAGGTGATATTGGAGATGC---AGTACAAGACTCTGGA 345
||||||||||||||||||||||||||||||||||||| ||| || | |||| ||||||
Sbjct 491 AATCTAGGCAATAAAAGAGTGTCAGGTGATATTGGAGGTGCAGGAGAAGAAGAGTCTGGA 550
Query 346 AGTGGAAAGCAACTCCATGAGGTTCG-TCTTTGCAAAGAAACATTGCAAGATGCCTTTAA 404
|| ||||||||||||||||| || | |||||||||||||||||||| ||||| ||||||
Sbjct 551 AGCGGAAAGCAACTCCATGAAATT-GATCTTTGCAAAGAAACATTGCCAGATGTCTTTAA 609
Query 405 CAGGAATGCTCAAGTGGGAGCTGCAATGGGGATCTCTCATAATCTTGAGGCAGATGATTA 464
|| ||||||||||||||||| |||||||||||||||||| ||||||||||||||| || |
Sbjct 610 CATGAATGCTCAAGTGGGAGTTGCAATGGGGATCTCTCAGAATCTTGAGGCAGATAATAA 669
Query 465 CTCTGGTTTTG-CTGATAT-AAGTTC-TCAAGTTGCAGTACAACCAAAGACTTCTGTATG 521
|||| ||||| |||| | | |||| | || |||||||| || ||||| ||||| |||
Sbjct 670 CTCT-TTTTTGTGTGAT-TCAGGTTCAGC-AGGTGCAGTACCACAAAAGATTTCTGGATG 726
Query 522 TGCTGG-TCCAAAGTTTAACGACTTTGAAAAGCTGAGGGAAGAAGTAAACTTTGCAGTTG 580
|||||| | ||| ||||| |||||||| | ||||||||||| |||||| |||| || ||
Sbjct 727 TGCTGGTTTGAAA-TTTAATGACTTTGATAGGCTGAGGGAAGGAGTAAAGTTTGAAGCTG 785
Query 581 GTCAGACCTGGGCT-CTT-T-ATGATACAGCAGATGGGTTGCCTAGATTGTATGCTCATA 637
|||| ||||||||| || | || |||| | ||| | ||||||||||||||||||| |
Sbjct 786 GTCAAACCTGGGCTATTTATAATAATACGGTGGATCAGATGCCTAGATTGTATGCTCAGA 845
Query 638 TCAGGAAAGTTTCAGCTCCTTCCTTTGGGCTTAGGATCACATATATAGAGCCAGATCCAG 697
|||| |||||||||||||||| ||| | |||||||| |||||| |||||||||||||||
Sbjct 846 TCAGAAAAGTTTCAGCTCCTTGTTTTAGTCTTAGGATTACATATCTAGAGCCAGATCCAG 905
Query 698 ATGATGAGAAAGAG-CTCCAATGGTTTGAAGAAGACTTGCCTGTTTCTGTTGGTAAGTTC 756
||| |||||||||| | |||||||||||| |||||||||||||||||||||||||| |||
Sbjct 906 ATGGTGAGAAAGAGAC-CCAATGGTTTGAGGAAGACTTGCCTGTTTCTGTTGGTAAATTC 964
Query 757 AGGCTTGGGGAAAATAAGAGCACAAAAGATCGTTCCATGTTTTCACATGTTATTCATTGC 816
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 965 AGGCTTGGGGAAAATAAGAGCACACAAGATCGTTCCATATTTTCACATGTTATTCATTGC 1024
Query 817 AATGAACGAAACAACGAGTTGAATGAACGAAGCAACACTCGTTGTTTCAG-ATTCACTTG 875
||| | ||| | | ||||||||| |||||||||| | |||||||
Sbjct 1025 AAT----G----AAC---------G---G-AGCAACACTAGTTGTTTCAGCA-TCACTTG 1062
Query 876 TCGTTTCATCAACACTTGTCATTTTAGTGTATCCCCTAGAAAAGGCGAGACATGGGCGCT 935
|||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1063 TCGTTTCATCGACACTTGCCATTTTAGTGTATCACCTAGAAAAGGCGAGACATGGGCGCT 1122
Query 936 TTTCAAGAACTGGGATATTAATTGGTCTTCAGAGCCAGATTCTCACCGCAAATATGAGTA 995
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 1123 TTTCAAGAACTGGGATATTAAGTGGTCTTCAGAGCTAGATTCTCACCGCAAATATGAGTA 1182
Query 996 TG-ATATTGTCGAGGTTCTGTCAGATTACGCTGATGAAGCTGGTGTATATGTTGCATACT 1054
|| || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1183 TGAAT-TTGTCGAGATTCTGTCAGATTACGCGGATGAAGCTGGTGTATATGTTGCATACT 1241
Query 1055 TGCATAAAGCAAAAGGGTTTGCTAGTGTGTTCTTTCGAATGGGAACTGGTTATGAAGGCA 1114
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1242 TGCATAAAGCAAAAGGGTTTGCTAGTGTGTTCTTCCGAATGGGAACTGGTTATGAAGGTA 1301
Query 1115 TATTTCGTATTTTACCTCAG-AGTTTGTATCGGTTCTCCCATAGGGTTCCTTCCTTCAAA 1173
|||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct 1302 TATTTCGTATTTTACCTC-GCAGTTTGTATCGGTTCTCTCATAGGGTTCCTTCCTTCAAA 1360
Query 1174 TTGACTGGA-ATTGAAGGAAAAGGTGTGCCAAAAGATGCTTACGAGCTGGACCAAGCTGC 1232
||||||||| | |||||||| |||||| |||| |||||||| |||||||| |||||||
Sbjct 1361 TTGACTGGAGAC-GAAGGAAACGGTGTGGCAAAGGATGCTTATGAGCTGGATGAAGCTGC 1419
Query 1233 GTTACCAGAAACAATAGAAGAGATCATCGTGCCTTCAAACGCTGAGAGTGATTTAACGCC 1292
|||||| |||||||| |||||| ||||| ||||||||||| |||||||||| || | |
Sbjct 1420 GTTACCTGAAACAATCGAAGAGTTCATCATGCCTTCAAACTCTGAGAGTGAAACAAAGTC 1479
Query 1293 TAAACGCCAAGCCATCTACTTTGCTAGCAAGGGGAAGGTTTTTCAGACTGGCCAGATTTG 1352
| ||| ||||||||||||||||||||| |||| ||||| ||||| ||||||||||| ||
Sbjct 1480 TGAACACCAAGCCATCTACTTTGCTAGTGAGGGAAAGGTCTTTCAAACTGGCCAGATCTG 1539
Query 1353 GTCATATT-ACAGTGGTAATGATGACTTGCCTCTGTACTACTG-TAGGATTCAGAAGATC 1410
||||| || |||||||| ||||||| |||||||| ||||| || ||||||||||||||||
Sbjct 1540 GTCAT-TTCACAGTGGTTATGATGATTTGCCTCTATACTA-TGGTAGGATTCAGAAGATC 1597
Query 1411 ACTTTTACTCAGGCATTTATGCAGGATCCTGTA-TGTAAACTACACATACGTCGGCTAAA 1469
||||||||||||||||||| ||||||||| ||| | ||||||||||||| | ||||||||
Sbjct 1598 ACTTTTACTCAGGCATTTAAGCAGGATCCGGTAAT-TAAACTACACATAAGCCGGCTAAA 1656
Query 1470 GGCTACTCGTTTCCCTGA-GTATGTTATCCAGTATGAAG-ACAGGAGAATGCCT 1521
|||||||||||||||||| | |||||||| | | |||| || || ||||||||
Sbjct 1657 GGCTACTCGTTTCCCTGAAG-ATGTTATCAACTG-GAAGTACGGGGGAATGCCT 1708
> AT5G18740.1 | Symbols: | Domain of unknown function (DUF3444)
| chr5:6249727-6252042 FORWARD LENGTH=2099
Length=2099
Score = 1262 bits (683), Expect = 0.0
Identities = 1053/1222 (86%), Gaps = 64/1222 (5%)
Strand=Plus/Plus
Query 314 GTGATATTGGAGATGCAGTACAAGACTCTGGAAGTGGAAAGCAACTCCATGAGGTTCGTC 373
|||||| |||||||||| |||||| | |||||| ||||||||||||| ||||||| |
Sbjct 430 GTGATAATGGAGATGCAACACAAGAGTTTGGAAGCGGAAAGCAACTCCCTGAGGTT-G-A 487
Query 374 TT-TGC-AAAGAAACATTGCAAGATGCCTTTAACAGGAATGCTCAAGTGGGAGCTGCAAT 431
|| | | |||| || | | ||| | || ||||||||||||||||||| | |
Sbjct 488 TTGTTCTAAAG--AC----CCA-ATG----T--CA--AATGCTCAAGTGGGAGCTGTAGT 532
Query 432 GGGGATCTCTC-ATAATCTTGAGGCAGATGATTACTCTGGTTT-TGCTGATATAAGTTCT 489
||| | ||||| | |||||||||| ||| | | |||||||| || |||| | || |
Sbjct 533 GGGAAACTCTCGA-AATCTTGAGGTGGATCAAAATTCTGGTTTATG-TGAT-TCAG-AAT 588
Query 490 CA--AGTTGCAGTACAACCAAAGACTTCTGTATGTGCTGG-TCCAAAGTTTAACGACTTT 546
|| || || ||||| || ||||| ||||| || |||||| | ||| ||||||||||||
Sbjct 589 CAGGAGGTGTAGTACCACAAAAGATTTCTGGATTTGCTGGTTTGAAA-TTTAACGACTTT 647
Query 547 GAAAAGCTGAGGGAAGAAGTAAACTTTGCAGTTGGTCAGACCTGGGCTCTTTATGATACA 606
|| ||||||||||||||||||||||| | |||||| |||||||||||| ||| |||| ||
Sbjct 648 GATAAGCTGAGGGAAGAAGTAAACTTCGAAGTTGGGCAGACCTGGGCTATTTTTGATCCA 707
Query 607 GCAGATGGGTTGCCTAGATTGTATGCTCATATCAGGAAAGTTTCAGCTCCTTCCTTTGGG 666
| ||||| ||||||||||||||||| | |||| |||||||||||||||| |||||
Sbjct 708 GTGGATGGAATGCCTAGATTGTATGCTAAGATCATAAAAGTTTCAGCTCCTTGTTTTGGT 767
Query 667 CTTAGGATCACATATATAGAGCCAGATCCAGATGATGAGAAAGAGCTCCAATGGTTTGAA 726
|||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct 768 CTTAGGATTACATATCTAGAGCCAGATCCAGATGGTGAGAAAGAGCTCCAATGGTTTGAA 827
Query 727 GAAGACTTGCCTGTTTCTGTTGGTAAGTTCAGGCTTGGGGAAAATAAGAGCACAAAAGAT 786
|||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 828 GAAGACTTGCCTGTTTCTGTTGGTAACTTCAGGCTTGGGGAAAATAAGTGCACACAAGAT 887
Query 787 CGTTCCATGTTTTCACATGTTATTCATTGCAATGAACGAAACAACGAGTTGAATGAACGA 846
||||| || ||||||||||| |||||||||||| | | | | | |
Sbjct 888 CGTTCAATATTTTCACATGTGATTCATTGCAAT----G-----A--A--T---T-----A 926
Query 847 AGCAACACTCGTTGTTTCAGATTCACTTGTCGTTTCATCAACACTTGTCATTTTAGTGTA 906
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 927 AGCAACACTCTTTGTTTCAGCGTCACTTGTCGTTTCATCAACACTTGTCATTTTAGTGTA 986
Query 907 TCCCCTAGAAAAGGCGAGACATGGGCGCTTTTCAAGAACTGGGATATTAATTGGTCTTCA 966
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 987 TCCCCTAGAGAAGGCGAGACATGGGCGCTTTTCAAGAACTGGGATATTAAGTGGTCTTCA 1046
Query 967 GAGCCAGATTCTCACCGCAAATATGAGTATGATATT-GTCGAGGTTCTGTCAGATTACGC 1025
||||||||||||||||||||||||||||| || ||| |||||| ||||||||||||||||
Sbjct 1047 GAGCCAGATTCTCACCGCAAATATGAGTACGA-ATTTGTCGAGATTCTGTCAGATTACGC 1105
Query 1026 TGATGAAGCTGGTGTATATGTTGCATACTTGCATAAAGCAAAAGGGTTTGCTAGTGTGTT 1085
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1106 TGATGAAGCTGGTGTATATGTTGCATACTTACATAAAGCAAAAGGATTTGCTAGTGTGTT 1165
Query 1086 CTTTCGAATGGGAACTGGTTATGAAGGCATATTTCGTATTTTACCTCAG-AGTTTGTATC 1144
| | ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||
Sbjct 1166 CCTCCGAATGGGAACTGGTTATGAAGGTATATTTCGTATTTTACCTC-GCAGTTTGTATC 1224
Query 1145 GGTTCTCCCATAGGGTTCCTTCCTTCAAATTGACTGGAATTGAA-GGAAAAGGTGTGCCA 1203
|||||||||||||||| |||||||||||| |||| ||| | ||| ||||||| | |||||
Sbjct 1225 GGTTCTCCCATAGGGTCCCTTCCTTCAAACTGACAGGAGT-GAAAGGAAAAGATATGCCA 1283
Query 1204 AAAGATGCTTACGAGCTGGACCAAGCTGCGTTACCAGAAACAATAGAAGAGATCATCGTG 1263
||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct 1284 AAAGATGCTTATGAGCTAGACCAAGCTGCCTTACCAGAAACAATTGAAGAGATCATTGTG 1343
Query 1264 CCTTCAAACGCTGAGAGTGATTTAACGCCTAAACGCCAAGCCATCTACTTTGCTAGCAAG 1323
||||||||| ||||||| || ||| | |||||||||||||||||||| |||||||||||
Sbjct 1344 CCTTCAAACTCTGAGAGCAATATAAAGTCTAAACGCCAAGCCATCTACATTGCTAGCAAG 1403
Query 1324 GGGA-AGGTTTTTCAGACTGGCCAGATTTGGTCATATTACAGTGGTAATGATGACTTGCC 1382
|| | |||||||||||||||||||||| ||||||| |||||||||| ||||||| |||||
Sbjct 1404 GG-ATAGGTTTTTCAGACTGGCCAGATCTGGTCATTTTACAGTGGTTATGATGATTTGCC 1462
Query 1383 TCTGTACTACTG-TAGGATTCAGAAGATCACTTTTACTCAGGCATTTATGCAGGATCCTG 1441
||||||||| || ||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 1463 TCTGTACTA-TGGTAGGATTCAGAAGATCACTTTTACTCAGGCATTTAAGCAGGACCCTG 1521
Query 1442 TA-TGTAAACTACACATACGTCGGCTAAAGGCTACTCGTTTCCCTGAGTATGTTATCCAG 1500
|| | ||||||||||||| |||||||||||||||| | || |||| || |||||||| |
Sbjct 1522 TAAT-TAAACTACACATAGGTCGGCTAAAGGCTACCCATTCCCCTAAGGATGTTATCGAC 1580
Query 1501 TATGAAGACAGG-AGAATGCCT 1521
| ||||||||| | |||||||
Sbjct 1581 TGGGAAGACAGGCA-AATGCCT 1601
Score = 521 bits (282), Expect = 8e-147
Identities = 444/519 (86%), Gaps = 24/519 (5%)
Strand=Plus/Plus
Query 1534 GAAGACAGG-AGAATGCCTATTGGTTGTGGAACATTCTACGCAAGGAAAC-TTCTAGAAA 1591
||||||||| | ||||||| |||||||||||||||||||| ||| ||||| |||||||||
Sbjct 1584 GAAGACAGGCA-AATGCCTGTTGGTTGTGGAACATTCTACTCAA-GAAACGTTCTAGAAA 1641
Query 1592 TAATCACCCCAAATGAGGTTTCACATCAGATAATTCCTCAAACCTCCTTGGATGGCATTG 1651
||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||
Sbjct 1642 TAATCACCCCAAATGAGGTTTCACATCAGGTAGTTCCTCAAACCTCAATGGATGGCATTG 1701
Query 1652 AATATACCATCCTCCCCAAGATTGGTGAAGTTTGGGTGATATATAGATACTGGAGTAGTC 1711
||||||| || || ||||||||||||||| ||| ||||||||| ||||||||||||||||
Sbjct 1702 AATATACTATTCTACCCAAGATTGGTGAACTTTAGGTGATATACAGATACTGGAGTAGTC 1761
Query 1712 ACATTGATGTTGAGGACTTGGAAAATGAAGTTTATGACATTGTCGAAATTCTTGATGACA 1771
|||||||||||||||||||| || |||||||||| || ||| ||||||||||||
Sbjct 1762 TTATTGATGTTGAGGACTTGGAGTTTGGTCTTTATGACATGGTTGAAGTTCTTGATGACA 1821
Query 1772 CTTCTG-ACTATAAGGTTCAACTGCTGAAGCAAC-AAGCCGTTGATGGTGATCG-TGAT- 1827
||| || |||||||||| ||||||||| || | | || ||||| ||| |||| | ||||
Sbjct 1822 CTT-TGGACTATAAGGTCCAACTGCTGGAGTA-CGAATCCGTTCATGATGAT-GATGATG 1878
Query 1828 A--ACTTTGAATAT---A-T-G-TTATTTAGGGCAGGTAAGGAGTATACTTATAACGAGG 1879
| || |||| || | | | || || |||||| ||| ||||||||||||||||||||
Sbjct 1879 ATGACGATGAAAATGGGAATAGGTTGTTCAGGGCATGTACGGAGTATACTTATAACGAGG 1938
Query 1880 ATGACGAGTCAGAAACAATATTAACGATCCCAAAGTCGGAAAGGATCATCAGTTTCTCGC 1939
||| | ||| ||| ||||||| |||||||||||||||||||| | ||||| ||||||
Sbjct 1939 CTGAAGGGTCCGAACCAATATTTACGATCCCAAAGTCGGAAAG-A--ATCAGATTCTCGA 1995
Query 1940 ATAAGGTATC-TGCTTCTCGTGTAACCAAAGAGATGGACGGAGAGTTAAAAGAGTTTTTA 1998
||||||| || ||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 1996 ATAAGGT-TCCTGCTTCTCGTGTAACCAAAGAGATGCATGGAGAGTTAAAAGAGTTTTTA 2054
Query 1999 AGTGTTGATTATAGGGCAACACCTTTTAACGTTAAACAC 2037
|||||||||||||||||||| ||| | || |||| ||||
Sbjct 2055 AGTGTTGATTATAGGGCAACCCCTATAAATGTTATACAC 2093
> AT5G18720.1 | Symbols: | Domain of unknown function (DUF3444)
| chr5:6244005-6246227 FORWARD LENGTH=1838
Length=1838
Score = 1205 bits (652), Expect = 0.0
Identities = 893/1004 (89%), Gaps = 37/1004 (4%)
Strand=Plus/Plus
Query 501 ACAACCAAAGACTTCTG--TATG-TGCTGGTCCAAAGTTTAACGACTTTGA-AAAGCTGA 556
|||| |||| | ||||| | || || |||||||||||||||||||||| | |||||||
Sbjct 282 ACAAGCAAACATTTCTGAATGTGTTGTTGGTCCAAAGTTTAACGACTTT-AGTAAGCTGA 340
Query 557 GGGAAGAAGTAAACTTTGCAGTTGGTCAGACCTGGGCTCTTTATGATACAGCAGATGGGT 616
||||||||| ||||||| |||||||||||||||||| |||||||||||| ||||||
Sbjct 341 GGGAAGAAGCAAACTTTAAAGTTGGTCAGACCTGGGCGCTTTATGATACAATGGATGGGA 400
Query 617 TGCCTAGATTGTATGCTCATATCAGGAAAGTTTCAGCTCCTTCCTTTGGGCTTAGGATCA 676
||||||||||||||||||| |||||||||||||||||||||| ||||| |||| ||| |
Sbjct 401 TGCCTAGATTGTATGCTCAGATCAGGAAAGTTTCAGCTCCTTGTTTTGGTCTTATGATTA 460
Query 677 CATATATAGAGCCAGATCCAGATGATGAGAAAGAGCTCCAATGGTTTGAAGAAGACTTGC 736
||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct 461 CATATCTAGAGCCAGATTCAAATGATGAGAAAGAGCTCCAATGGTTTGAAAAAGACTTGC 520
Query 737 CTGTTTCTGTTGGTAAGTTCAGGCTTGGGGAAAATAAGAGCACAAAAGATCGTTCCATGT 796
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
Sbjct 521 CTGTTTCTGTTGGTAACTTCAGGCTTGGGGAAAATAAGAGCACAAAAGATCGTTCAATAT 580
Query 797 TTTCACATGTTATTCATTGCAATGAACGAAACAACGAGTTGAATGAACGAAGCAACACTC 856
||||||||||||||||||||||| | ||| | | |||||| ||
Sbjct 581 TTTCACATGTTATTCATTGCAAT----G----AAC---------G---G-AGCAACGCTA 619
Query 857 GTTGTTTCAG-ATTCACTTGTCGTTTCATCAACACTTGTCATTTTAGTGTATCCCCTAGA 915
|||||||||| | |||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 620 GTTGTTTCAGCA-TCACTTGTCGTTTCATCAGTACTTATCATTTTAGTGTATCCCCTAGA 678
Query 916 AAAGGCGAGACATGGGCGCTTTTCAAGAACTGGGATATTAATTGGTCTTCAGAGCCAGAT 975
|| || ||||| ||||||||||||||||||||||||||||| ||||||| | | ||||||
Sbjct 679 AATGGAGAGACTTGGGCGCTTTTCAAGAACTGGGATATTAAGTGGTCTTTAAAACCAGAT 738
Query 976 TCTCACCGCAAATATGAGTATG-ATATTGTCGAGGTTCTGTCAGATTACGCTGATGAAGC 1034
|||||||||||||||||||||| || ||||| || ||||||||||||||||||||||| |
Sbjct 739 TCTCACCGCAAATATGAGTATGAAT-TTGTCAAGATTCTGTCAGATTACGCTGATGAAAC 797
Query 1035 TGGTGTATATGTTGCATACTTGCATAAAGCAAAAGGGTTTGCTAGTGTGTTCTTTCGAAT 1094
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 798 TGGTGTATATGTTGCATACTTGCATAAAGCAAAAGGATTTGCTAGTGTGTTCTTTCGAAT 857
Query 1095 GGGAACTGGTTATGAAGGCATATTTCGTATTTTACCTCAGAGTTTGTATCGGTTCTCCCA 1154
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 858 GGGAAGAGGTTATGAAGGTATATTTCGTATTTTACCTCAGAGTTTGTATCGGTTCTCCCA 917
Query 1155 TAGGGTTCCTTCCTTCAAATTGACTGGAATTGAAGGAAAAGGTGTGCCAAAAGATGCTTA 1214
|||| |||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 918 TAGGATTCCTTCC-T----TTGACTGGAATTGAAGGAAAAGGTGTGCCAAAAGATGCTTA 972
Query 1215 CGAGCTGGACCAAGCTGCGTTACCAGAAACAATAGAAGAGATCATCGTGCCTTCAAACGC 1274
|||||||||| |||||||||||||||||||||| |||||| |||||||||||| | || |
Sbjct 973 CGAGCTGGACAAAGCTGCGTTACCAGAAACAATCGAAGAGTTCATCGTGCCTTTAGACTC 1032
Query 1275 TGAGAGTGATTTAACGCCTAAACGCCAAGCCATCTACTTTGCTAGCAAGGGGAAGGTTTT 1334
||||||| || ||| | |||||||||||| || ||||||||||||||||| || |||||
Sbjct 1033 TGAGAGTAATATAAAGTCTAAACGCCAAGATATATACTTTGCTAGCAAGGGTAATGTTTT 1092
Query 1335 TCAGACTGGCCAGATTTGGTCATATTACAGTGGTAATGATGACTT-GCCTCTGTACTACT 1393
|| |||||||||||||||||||| |||| ||||| ||||| ||| |||||||||||||
Sbjct 1093 TCTGACTGGCCAGATTTGGTCATTTTACTGTGGTGATGATT-CTTTGCCTCTGTACTACG 1151
Query 1394 GTAGGATTCAGAAGATCACTTTTACTCAGGCATTTATGCAGGATCCTGTATGTAAACTAC 1453
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 1152 GTAGGATTCAGAAGATCACTTTTACCCAGGCATTTATGCAGGATCCTGTATGTAAATTAC 1211
Query 1454 ACATACGTCGGCTAAAGGCTACTCGTTTCCCTGAGTATGTTATC 1497
| ||| ||||||||||||||||||||||||||| | ||||||||
Sbjct 1212 ATATAGGTCGGCTAAAGGCTACTCGTTTCCCTGCGGATGTTATC 1255
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102258510165
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5