BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg941587
Length=1080
Score E
Sequences producing significant alignments: (Bits) Value
AT5G20340.1 | Symbols: BG5 | beta-1,3-glucanase 5 | chr5:687478... 1365 0.0
AT5G20330.1 | Symbols: BETAG4 | beta-1,3-glucanase 4 | chr5:687... 1280 0.0
AT1G33220.1 | Symbols: | Glycosyl hydrolase superfamily protei... 1168 0.0
> AT5G20340.1 | Symbols: BG5 | beta-1,3-glucanase 5 | chr5:6874787-6875851
FORWARD LENGTH=1065
Length=1065
Score = 1365 bits (739), Expect = 0.0
Identities = 893/968 (92%), Gaps = 8/968 (1%)
Strand=Plus/Plus
Query 95 TGGTTTCGTAACCGCAGTAAATAGCATTGGCTTGAACTATGGTCTCCTCGGAGATAACCT 154
||| ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 102 TGGCTTCGTAAACGCAGCAAATAGCATTGGCTTGAACTACGGTCTCCTCGGAGATAACCT 161
Query 155 CCCGTCTCCGTCCAATGTTATAAACCTTTACAAGTCCATAGACATTACTAAAATCCGAAT 214
||| |||||||| || ||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 162 CCCATCTCCGTCAAAAGTTATAACCCTTTACAAGTCCATAGACATCACTAAAATCCGAAT 221
Query 215 CTTCGACCCGAACACTGAAGTTCTTAACGCTTTACGCGGCCACCGTGATATTGCAGTCAC 274
||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||| |||||
Sbjct 222 CTTCGACCCAAACACTGAGGTTCTTAACGCTTTACGTGGCCATCGTGATATTGCGGTCAC 281
Query 275 TGTAGGCGTTAGGGACCAGGACTTGGCTGCTCTTGCAGCTAGCGAAGAAGCTGTTAAGGG 334
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 282 AGTAGGAGTTAGGGACCAGGACTTGGCTGCTCTTTCAGCTAGCGAAGAAGCTGTTAAGGG 341
Query 335 CTGGTTTGCGACCAACATCGAGCCTTACTTACCCGACGTCAACATCGCGTTCATTACTGT 394
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 342 CTGGTTTGCGACCAACATCGAGCCTTACTTATCCGACATCAACATCGCGTTCATTACTGT 401
Query 395 TGGTAATGAAGTCATCCCTGGACCAATTGGTTCTCAAGTGCTTCCCGTCATGCAGTCTCT 454
|||||| ||||||||||| |||||||| ||| ||||||||||||| ||||||||||||||
Sbjct 402 TGGTAACGAAGTCATCCCCGGACCAATCGGTCCTCAAGTGCTTCCAGTCATGCAGTCTCT 461
Query 455 CACCAACCTGGTCAGGTCAAGGAATCTTCCAATCTCGATAAGCACTGTGGTGGCTATGTG 514
||||||||| |||| ||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 462 CACCAACCTCGTCAAGTCAAGGAATCTTCCTATCTCGATAAGCACGGTGGTGGCTATGTG 521
Query 515 GAACCTCGAGCAATCGTACCCACCTTCCGCAGGAATGTTCACGTCTCAAGCGCGTGAACA 574
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 522 GAACCTCGAGCAATCATACCCACCTTCCGCAGGAATGTTCACGTCTCAAGCGCGTGAACA 581
Query 575 ACTTGTTCCCGTGCTGAAACTATTGTCTCAAACAAATACGCCCATTCTCGTAAATATTTA 634
|||||| ||||||||||||||||| || ||||||||| |||| || |||||||| || ||
Sbjct 582 ACTTGTCCCCGTGCTGAAACTATTATCCCAAACAAATTCGCCTATCCTCGTAAAAATCTA 641
Query 635 CCCTTACTTC-CCTTATGTGTCCGACCCAGCGAGCATCCCTCTCGACTATGCCACCTTCA 693
|||||||||| || |||| |||||||||| | ||||||| | | ||||||||||||||||
Sbjct 642 CCCTTACTTCTCC-TATGCGTCCGACCCATCTAGCATCCGTTTGGACTATGCCACCTTCA 700
Query 694 ATACTGAGGCCATCGTGGTACAAGATGGACCACTGGGCTATTCAAACATGTTTGATTCAA 753
| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 701 ACACTGAGGCCATCGTGGTACAAGATGGATCACTGGGCTATTCAAACATGTTTGATGCAA 760
Query 754 TATTTGACGCTTTCGTGTGGGCAATGGAGAAGGAAGGCGTTAAAGATTTACCAATGGTGG 813
| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 TCTTTGATGCGTTCGTGTGGGCAATGGAGAAGGAAGGCGTTAAAGATTTACCAATGGTGG 820
Query 814 TGTCCGAGACCGGATGGCCATCTGCTGGGAATGGAAACTTTACCACGCCGGATATCGCAG 873
||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |
Sbjct 821 TGTCCGAGACCGGATGGCCATCTGCCGGGAATGGAAACATTACCACGCCGGATATCGCGG 880
Query 874 GTACCTACAACAGAAATTTTGTGAAACATATAACAAGCGGAAAAGGGACGCCCAAGAAGC 933
||||||| ||||||||||| ||||| |||||| ||||||||||||| || || || |||
Sbjct 881 GTACCTATAACAGAAATTTCGTGAAGCATATAGCAAGCGGAAAAGGTACACCTAA-AAGG 939
Query 934 CC-AACAAGGGCATCGACGTGTTTTTGTTTGCAACATTT-AATGAAAATCAGAAGCCGG- 990
|| ||||| |||||||||| ||||||||||||||| ||| ||||||||||| |||||||
Sbjct 940 CCTAACAAAGGCATCGACGGGTTTTTGTTTGCAAC-TTTCAATGAAAATCAAAAGCCGGT 998
Query 991 CAGGGACTGAACAAAATTTTGGGTTGTACAATCCAAATGATATGAAGCCCATCTACAAGC 1050
| |||||||||||||| |||||||| |||||||| ||||||||||||||||||||||| |
Sbjct 999 C-GGGACTGAACAAAACTTTGGGTTATACAATCCGAATGATATGAAGCCCATCTACAATC 1057
Query 1051 TATTCTAA 1058
||||||||
Sbjct 1058 TATTCTAA 1065
> AT5G20330.1 | Symbols: BETAG4 | beta-1,3-glucanase 4 | chr5:6871561-6873112
FORWARD LENGTH=1552
Length=1552
Score = 1280 bits (693), Expect = 0.0
Identities = 947/1071 (88%), Gaps = 12/1071 (1%)
Strand=Plus/Plus
Query 16 TCATCATGTTCTATTCGA-CTAAGAAGCTATTCTTGTTCTTCTTCTTGTGCATTGTGCTG 74
|||||||| ||||||| | |||||||||| |||||||||||| ||| |||||||||||||
Sbjct 55 TCATCATGCTCTATTC-ACCTAAGAAGCTGTTCTTGTTCTTCCTCTCGTGCATTGTGCTG 113
Query 75 AT-TGTCAACTACAACAACAATGGTTTCGTAACCGCAGTAAATAGCATTGGCTTGAACTA 133
| |||||||| |||||||| ||| ||||||||||||| ||||||||| |||||||||||
Sbjct 114 -TATGTCAACTCCAACAACAGTGGCTTCGTAACCGCAGCAAATAGCATCGGCTTGAACTA 172
Query 134 TGGTCTCCTCGGAGATAACCTCCCGTCTCCGTCCAATGTTATAAACCTTTACAAGTCCAT 193
|| |||||||| || |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 173 CGGACTCCTCGGTGACAACCTCCCGTCTCCTTCCAATGTTATCAACCTTTACAAGTCCAT 232
Query 194 AGACATTACTAAAATCCGAATCTTCGACCCGAACACTGAAGTTCTTAACGCTTTACGCGG 253
|| ||||| || ||||||||||||||||||||||||||| || || || || ||||| ||
Sbjct 233 AGGCATTAGTAGAATCCGAATCTTCGACCCGAACACTGAGGTACTCAATGCCTTACGTGG 292
Query 254 CCACCGTGATATTGCAGTCACTGTAGGCGTTAGGGACCAGGACTTGGCTGCTCTTGCAGC 313
||||| ||||||| ||||||||| ||||||| |||||| ||||||||||||||||| ||
Sbjct 293 TCACCGCGATATTGAAGTCACTGTTGGCGTTAAGGACCAAGACTTGGCTGCTCTTGCTGC 352
Query 314 TAGCGAAGAAGCTGTTAAGGGCTGGTTTGCGACCAACATCGAGCCTTACTTACCCGACGT 373
|||||||||||||||||||||||||| ||| ||||||||||| |||||||| | |||||
Sbjct 353 AAGCGAAGAAGCTGTTAAGGGCTGGTTCGCGGCCAACATCGAGTCTTACTTAGCTGACGT 412
Query 374 CAACATCGCGTTCATTACTGTTGGTAATGAAGTCATCCCTGGACCAATTGGTTCTCAAGT 433
||||||| | || ||||| |||||||| ||||||||||| |||||||| ||| |||||||
Sbjct 413 CAACATCACATTTATTACCGTTGGTAACGAAGTCATCCCCGGACCAATCGGTCCTCAAGT 472
Query 434 GCTTCCCGTCATGCAGTCTCTCACCAACCTGGTCAGGTCAAGGAATCTTCCAATCTCGAT 493
||||||||||||||||||||| |||||||| |||| ||| ||||||||||| ||||||||
Sbjct 473 GCTTCCCGTCATGCAGTCTCTAACCAACCTAGTCAAGTCGAGGAATCTTCCGATCTCGAT 532
Query 494 AAGCACTGTGGTGGCTATGTGGAACCTCGAGCAATCGTACCCACCTTCCGCAGGAATGTT 553
|||||| ||||||||||||| |||||| ||||| ||||| ||||||||||| ||||||||
Sbjct 533 AAGCACCGTGGTGGCTATGTCGAACCTGGAGCAGTCGTATCCACCTTCCGCGGGAATGTT 592
Query 554 CACGTCTCAAGCGCGTGAACAACTTGTTCCCGTGCTGAAACTATTGTCTCAAACAAATAC 613
||| || || ||||| ||||||||||| |||||| ||||||||||||||||||||| ||
Sbjct 593 CACCTCCCAGGCGCGGGAACAACTTGTCCCCGTGTTGAAACTATTGTCTCAAACAAGCAC 652
Query 614 GCCCATTCTCGTAAATATTTACCCTTACTTCCCTTATGTGTCCGACCCAGCGAGCATCCC 673
|| || || || || || |||||||||||| |||||| |||||||||||| | |||||
Sbjct 653 ACCAATCCTTGTCAACATATACCCTTACTTCGCTTATGCGTCCGACCCAGCCAACATCCG 712
Query 674 TCTCGACTATGCCACCTTCAATACTGAGGCCATCGTGGTACAAGATGGACCACTGGGCTA 733
|||||||||||||| ||| || ||| || |||||||||| ||||||||| || |||||||
Sbjct 713 TCTCGACTATGCCAGCTTTAACACTAAGTCCATCGTGGTCCAAGATGGATCATTGGGCTA 772
Query 734 TTCAAACATGTTTGATTCAATATTTGACGCTTTCGTGTGGGCAATGGAGAAGGAAGGCGT 793
|||||||||||||||| |||| ||||| || |||||||||||||||||||||||||||||
Sbjct 773 TTCAAACATGTTTGATGCAATCTTTGATGCGTTCGTGTGGGCAATGGAGAAGGAAGGCGT 832
Query 794 TAAAGATTTACCAATGGTGGTGTCCGAGACCGGATGGCCATCTGCTGGGAATGGAAACTT 853
|||| ||||||||||||||||||||||||||||||||||||| || ||||| || |||||
Sbjct 833 TAAAAATTTACCAATGGTGGTGTCCGAGACCGGATGGCCATCCGCGGGGAACGGGAACTT 892
Query 854 TACCACGCCGGATATCGCAGGT--ACCTACAACAGAAATTTTGTGAAACATATAACAAGC 911
||||||||||| ||| || | | ||||||||||||||||||||||| |||||| |||||
Sbjct 893 TACCACGCCGGCTATTGC-G-TCCACCTACAACAGAAATTTTGTGAAGCATATAGCAAGC 950
Query 912 GGAAAAGGGACGCCCAAGAAGCCC-AACAAGGGCATCGA-CGTGTTTTTGTTTGCAACAT 969
|||||||||||||| || ||| || |||||| |||| || || ||||||||||||||| |
Sbjct 951 GGAAAAGGGACGCCTAA-AAGGCCTAACAAGAGCAT-GAACGGGTTTTTGTTTGCAACGT 1008
Query 970 TTAATGAAAATCAGAAGCCGGCAGGGACTGAACAAAATTTTGGGTTGTACAATCCAAATG 1029
| |||||||||||||||||||| |||||||||||||| ||||| || |||||||||| ||
Sbjct 1009 TCAATGAAAATCAGAAGCCGGCCGGGACTGAACAAAACTTTGGTTTATACAATCCAAGTG 1068
Query 1030 ATATGAAGCCCATCTACAAGCTATTCTAAGTGTGAAAGTTTTTTGGACTTT 1080
|||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct 1069 ATATGAAGCCTATCTACAAGCTATTCTAAGTGTGAAAGTTACTTAGACTTT 1119
> AT1G33220.1 | Symbols: | Glycosyl hydrolase superfamily protein
| chr1:12044872-12045879 FORWARD LENGTH=1008
Length=1008
Score = 1168 bits (632), Expect = 0.0
Identities = 869/985 (88%), Gaps = 10/985 (1%)
Strand=Plus/Plus
Query 21 ATGTTCTATTCGACTAAGAAGCTATTCTTGTTCTTCTTCTTGTGCATTGTGCTGA-TTGT 79
||| ||||||| |||||||||| |||||||||||| ||| ||||||| |||||| || |
Sbjct 1 ATGGTCTATTCCTCTAAGAAGCTGTTCTTGTTCTTCCTCTCGTGCATTATGCTGACTT-T 59
Query 80 CAACTACAACAAC-AATGGTTTCGTAACCGCAGTAAATAGCATTGGCTTGAACTATGGTC 138
|||||| ||| || | ||| |||||| |||||| ||||||||| ||||||||||| || |
Sbjct 60 CAACTATAAC-ACTAGTGGCTTCGTAGCCGCAGCAAATAGCATAGGCTTGAACTACGGCC 118
Query 139 TCCTCGGAGATAACCTCCCGTCTCCGTCCAATGTTATAAACCTTTACAAGTCCATAGACA 198
|||||||||||||| |||| |||| ||||||||| | ||||||||||||||||||| ||
Sbjct 119 TCCTCGGAGATAACTTCCCAACTCCATCCAATGTTCTCAACCTTTACAAGTCCATAGGCA 178
Query 199 TTACTAAAATCCGAATCTTCGACCCGAACACTGAAGTTCTTAACGCTTTACGCGGCCACC 258
|||| |||||||||||||||||||| || || || ||||||||||| |||||||||||||
Sbjct 179 TTACAAAAATCCGAATCTTCGACCCAAAAACAGAGGTTCTTAACGCCTTACGCGGCCACC 238
Query 259 GTGATATTGCAGTCACTGTAGGCGTTAGGGACCAGGACTTGGCTGCTCTTGCAGCTAGCG 318
|| |||||| ||||||||| ||||| |||||||||||||||| ||||||| |||||| ||
Sbjct 239 GTAATATTGAAGTCACTGTTGGCGTGAGGGACCAGGACTTGGGTGCTCTTTCAGCTAACG 298
Query 319 AAGAAGCTGTTAAGGGCTGGTTTGCGACCAACATCGAGCCTTACTTACCCGACGTCAACA 378
||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct 299 AAGAAGCTGTTAAGGGCTGGTTTGCAACCAACATCGAGCCTTACTTAGCCGATGTCAACA 358
Query 379 TCGCGTTCATTACTGTTGGTAATGAAGTCATCCCTGGACCAATTGGTTCTCAAGTGCTTC 438
| |||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||
Sbjct 359 TTGCGTTCATTACTGTTGGTAATGAAGTCATCCCCGGACCAATCGGTCCTCAAGTGCTTC 418
Query 439 CCGTCATGCAGTCTCTCACCAACCTGGTCAGGTCAAGGAATCTTCCAATCTCGATAAGCA 498
| |||||||||||||| |||| ||| |||| ||| | ||| ||||| |||||||||||||
Sbjct 419 CGGTCATGCAGTCTCTTACCATCCTCGTCAAGTCGATGAACCTTCCCATCTCGATAAGCA 478
Query 499 CTGTGGTGGCTATGTGGAACCTCGAGCAATCGTACCCACCTTCCGCAGGA-ATGTTCACG 557
| ||||||||||||| ||| || |||||||| ||||||||||| || ||| | |||||||
Sbjct 479 CCGTGGTGGCTATGTCGAATCTTGAGCAATCATACCCACCTTCTGCTGGAGA-GTTCACG 537
Query 558 TCTCAAGCGCGTGAACAACTTGTTCCCGTGCTGAAACTATTGTCTCAAACAAATACGCCC 617
||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 538 TCTCAAGCGCGAGAACAACTTGTCCCCGTGCTGAAACTATTGTCTCAAACAAGTACGCCT 597
Query 618 ATTCTCGTAAATATTTACCCTTACTTCCCTTATGTGTCCGACCCAGCGAGCATCCCTCTC 677
|||||||| ||||||||||||||||| ||||| | ||||||||| ||| |||||||||
Sbjct 598 ATTCTCGTCAATATTTACCCTTACTTTCCTTACGCATCCGACCCAACGAACATCCCTCTA 657
Query 678 GACTATGCCACCTTCAATACTGAGGCCATCGTGGTACAAGATGGACCACTGGGCTATTCA 737
|||||||| |||||||| ||| |||||| ||| || |||||||||||| |||||||||||
Sbjct 658 GACTATGCTACCTTCAACACTAAGGCCACCGTCGTCCAAGATGGACCATTGGGCTATTCA 717
Query 738 AACATGTTTGATTCAATATTTGACGCTTTCGTGTGGGCAATGGAGAAGGAAGGCGTTAAA 797
|||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| |||
Sbjct 718 AACATGTTTGATGCAATCTTTGACGCATTCGTGTGGGCAATGGAGAAGGAAGGCGTGAAA 777
Query 798 GATTTACCAATGGTGGTGTCCGAGACCGGATGGCCATCTGCTGGGAATGGAAACTTTACC 857
|||||||| |||||||||||||||||||||||||||||||| || ||||| ||||| |||
Sbjct 778 GATTTACCCATGGTGGTGTCCGAGACCGGATGGCCATCTGCCGGAAATGGGAACTTAACC 837
Query 858 ACGCCGGATATCGCAGGTACCTACAACAGAAATTTTGTGAAACATATAACAAGCGGAAAA 917
|| ||||||||||| ||||| |||||||||||||| |||||||||||| |||||| ||
Sbjct 838 ACACCGGATATCGCGGGTACTTACAACAGAAATTTCGTGAAACATATAGTAAGCGGGAA- 896
Query 918 GGGA-CGCCCAAGA-AGCCCAACAAGGGCATCGACGTGTTTTTGTTTGCAACATTTAATG 975
|||| |||| ||| | |||||||| || || || | |||||| |||||||| || || |
Sbjct 897 GGGAACGCCTAAGCGA-CCCAACAATGGAATGGATGGGTTTTTATTTGCAACGTTCAACG 955
Query 976 AAAATCAGAAGCCGGCAGGGACTGA 1000
||||||| |||||||| ||||||||
Sbjct 956 AAAATCAAAAGCCGGCCGGGACTGA 980
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 52911374430
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5