BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941600 Length=447 Score E Sequences producing significant alignments: (Bits) Value AT5G20500.1 | Symbols: | Glutaredoxin family protein | chr5:69... 628 1e-179 > AT5G20500.1 | Symbols: | Glutaredoxin family protein | chr5:6938598-6939848 FORWARD LENGTH=645 Length=645 Score = 628 bits (340), Expect = 1e-179 Identities = 422/459 (92%), Gaps = 15/459 (3%) Strand=Plus/Plus Query 1 agaagaagaagaagaagaaagGAGCCATGACAATGCTTAGATCTATCTCGATGGTAATGT 60 ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 29 AGAAGAAGAAGAAGAAGAAAGGAGCCATGACAATGTTTAGATCTATCTCCATGGTAATGC 88 Query 61 TGCTCGT----C-----ACATTCATTTCTATGGTTTCTTCTTCTGCTTCTTCCCCAGAAG 111 ||||||| | |||||||||||||||||||||||| ||||||| |||||||||| Sbjct 89 TGCTCGTCGCACTAGTTACATTCATTTCTATGGTTTCTTCTGCTGCTTCGTCCCCAGAAG 148 Query 112 CCGACTTTGTTAAGAAGACCATCTCTTCCCACAAGATCGTCATCTTCTCCAAATCCTACT 171 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct 149 CCGACTTTGTTAAGAAGACTATCTCTTCCCATAAGATCGTCATTTTCTCCAAATCCTACT 208 Query 172 GCCCCTATTGCAGGAAAGCTAAATCCGTTTTCAGAGAGCTAGATCAAGTTCCTTATGTTG 231 ||||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||||| Sbjct 209 GCCCCTACTGCAAGAAAGCTAAATCAGTGTTCAGAGAGCTGGATCAAGTTCCTTATGTTG 268 Query 232 TCGAGCTTGATGAAAGAGAAGATGGGTGGAGCATCCAGACTGCACTTGGAGAGATTGTTG 291 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 269 TCGAGCTTGATGAAAGAGAAGATGGTTGGAGCATCCAGACTGCACTTGGAGAGATTGTTG 328 Query 292 GGAGGCGAACAGTACCGCAAGTCTTCATTGACGGAAAACA-CATTGGAGGATCAGACGAT 350 | ||||||||||||||||||||||||||| |||||||||| | | ||||||||||| ||| Sbjct 329 GAAGGCGAACAGTACCGCAAGTCTTCATTAACGGAAAACATC-TCGGAGGATCAGATGAT 387 Query 351 ACCGTAGATGCGAACGAGAGCGGTGAACTGGCCAAGCTTCTTGGTGTTTCCGGAAACAAA 410 |||||||||||| | |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 388 ACCGTAGATGCGTATGAGAGCGGTGAACTCGCCAAGCTTCTTGGTGTTTCCGGGAACAAA 447 Query 411 -AATGCTGAACTCTAGGTTGA-ATATAGTTGGAAGAATT 447 || ||||||||||||||| | ||||||||||||||||| Sbjct 448 GAA-GCTGAACTCTAGGTT-ATATATAGTTGGAAGAATT 484 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21263257827 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5