BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg941621
Length=2776
Score E
Sequences producing significant alignments: (Bits) Value
AT5G20660.1 | Symbols: | Zn-dependent exopeptidases superfamil... 4514 0.0
> AT5G20660.1 | Symbols: | Zn-dependent exopeptidases superfamily
protein | chr5:6986235-6991043 FORWARD LENGTH=2996
Length=2996
Score = 4514 bits (2444), Expect = 0.0
Identities = 2668/2778 (96%), Gaps = 8/2778 (0%)
Strand=Plus/Plus
Query 2 CGATCC-AAATTTTGAGACGATGAGGAAGCGTCATCCCAAGGGATCAGATTTGTCAGAGC 60
|||||| |||| ||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct 148 CGATCCAAAATCCGGAGACGATGAGGAAGCGTCATCCAAAGGCATCAGATTTAACAGAGC 207
Query 61 CATCTTCTTCCAGTCAAGAAACTGATGCTTCTTCTGATAAAGAAGCTCTCGATAAGGAAG 120
|||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 208 CATCTTCTTCGAGTAAAGAAACTGATGCTTCTTCTGATAAAGATGCTCTCGATAAGGAAG 267
Query 121 TGCAGGCTGATGTTAAAAGATCAGGAAAAGTATGGTTTTCAGTGTTGATTTTGATCACTT 180
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 268 TGCAGGCTGATGTTAAAAGATCAGGGAAAGTATGGTTGTCAGTGTTGATTTTGATCACTT 327
Query 181 ACTCTTCTTGGGTTGTTTACAATTATCAGCTTGGGAATTTACCTAAACCCTTAACCGCTA 240
|||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 328 ACTCATCTTGGTTTGTTTACAATTATCAGCTTGGGAATTTACCTAAACCCTTAACCGCAA 387
Query 241 AACAAGCTGGTAAAAGGGGTTTCTCTGAATTTGAAGCTATCAATCATGTTAAGGCTTTGA 300
||||||||||||||||||||||||||||| ||||||| ||||| |||||||| |||||||
Sbjct 388 AACAAGCTGGTAAAAGGGGTTTCTCTGAAATTGAAGCAATCAAACATGTTAAAGCTTTGA 447
Query 301 CTCAGTTTGGTCCTCATCCTGTTTCTTCTGATGCTCTTGTCCATGCCCTTGAGTATGTAT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 448 CTCAGTTTGGTCCTCATCCTGTTTCTTCTGATGCTCTTGTCCATGCCCTTGAGTATGTAT 507
Query 361 TGGCAGAAGTTGAGAAAGTTAAAGAAACTGCTCATTGGGAAGTTGATGTGAATGTTGACT 420
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 508 TGGCAGAAGTTGAGAAAGTTAAAGAAACAGCTCATTGGGAAGTTGATGTGAATGTTGATT 567
Query 421 TCTTTGAATCCAAATTTGGTGTAAATCGTTTGGTCGGTGGTCTGTTTAAGGGGAAGTCAC 480
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 568 TCTTTGAATCCAAATTTGGTGTAAATCGTTTGGTTGGTGGTCTTTTTAAGGGGAAGTCAC 627
Query 481 TTGTGTATTCAGATATAAGTCACATTGTACTAAGAATCTTGCCGAAATATGAATCAGACG 540
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 628 TTGTGTATTCTGATATAAGTCACATTGTACTAAGAATCTTGCCTAAATATGAATCAGACG 687
Query 541 CTGGAGACAATGCTATTCTGGTCTCTTCTCACATTGATACTGTCTTCACAACAGGTGGGG 600
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 688 CTGGAGACAATGCTATTCTTGTCTCTTCTCACATTGATACTGTCTTCACAACAGGTGGGG 747
Query 601 CTGGAGATTGTAGTTCCTGTGTAGCTGTAATGCTGGAGTTAGCTCGATCTGTTTCCCAAT 660
|||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct 748 CTGGAGATTGTAGTTCATGTGTAGCTGTAATGCTGGAACTAGCTCGATCTGCTTCCCAAT 807
Query 661 CGGCTCATGGATTCAAGAATTCGATTATCTTCTTGTTCAATACTGGAGAGGAAGAAGGTC 720
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 808 CAGCTCATGGATTCAAGAATTCGATTATATTCTTGTTCAATACTGGAGAGGAAGAAGGTC 867
Query 721 TTAATGGCGCTCATAGCTTTGTAACTCAGCATCCATGGAGTTCCACAGTACGTTTAGCTA 780
|||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||
Sbjct 868 TTAATGGCGCTCATAGCTTTATAACTCAGCATCCATGGAGTTCCACTGTTCGTTTAGCTA 927
Query 781 TTGATTTAGAGGCCATGGGTACGGGTGGAAAGTCCAGTATTTTTCAGGCTGGCCCGAGTC 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 928 TTGATTTAGAGGCCATGGGTACGGGTGGAAAGTCCAGTATTTTTCAGGCTGGCCCGAGTC 987
Query 841 CATGGGCTATTGAAAATTTTGCTTTGGCCGCGAAATATCCATCTGGTCAGATCATTGGGC 900
| ||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||| || |
Sbjct 988 CGTGGGCTATTGAGAATTTTGCTTTAGCCGCAAAATATCCATCTGGTCAAATCATCGGAC 1047
Query 901 AGGATCTGTTCACTTCTGGAGTCATAAAATCTGCGACCGATTTCCAAGTATACAAGGAGG 960
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 1048 AGGATCTGTTCACTTCTGGAATCATAAAATCTGCGACTGATTTCCAAGTATACAAGGAGG 1107
Query 961 TTGCTGGTCTCTCAGGGTTGGACTTTGCTTTTGCAGATAATACGGCTGTCTATCACACTA 1020
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1108 TTGCTGGTCTATCAGGGTTGGACTTTGCTTTTGCAGATAATACTGCTGTCTATCACACTA 1167
Query 1021 AAAATGATAAAATAGAACTAATAAAACCAGGATCGCTCCAGCATCTTGGGGAAAATATGC 1080
| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1168 AGAACGATAAGATAGAACTAATAAAACCAGGATCGCTCCAGCATCTTGGGGAAAATATGC 1227
Query 1081 TTGCTTTCCTTCTTCGGGTTGCTTCATCGTCTGATCTGCCAAAGGATGATACTCTCCAGG 1140
|||||||||| ||||||||||||||||| |||||||||||||||||| | || |||||||
Sbjct 1228 TTGCTTTCCTCCTTCGGGTTGCTTCATCTTCTGATCTGCCAAAGGATAAAACGCTCCAGG 1287
Query 1141 GAGAGGAGAA-ATCGACCCCGGACTCAGCTGTCTATTTTGACATTTTGGGGAAGTATATG 1199
||||||| || ||| | ||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1288 GAGAGGA-AAGATCCAACCCGGACTCAGCTGTCTATTTTGACGTTTTGGGGAAGTATATG 1346
Query 1200 ATTGTATACCGGCAAAGTTTGGCGACAATGCTATATGTTTCGGTGATCATGCAATCGATT 1259
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1347 ATTGTATACCGGCAAAGTTTGGCGACGATGCTATATGTTTCAGTGATCATGCAATCGATT 1406
Query 1260 CTTATATGGGTTTTGTCTGTGTTCATGGGTGGTTATCCGGCTGTTGTGTCGCTGATTTTG 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CTTATATGGGTTTTGTCTGTGTTCATGGGTGGTTATCCGGCTGTTGTGTCGCTGATTTTG 1466
Query 1320 TCGTGTTTGAGTATTATCCTCTCATGGATATTCTCAGTAGCTTTCTCGGTAGCTGTTGCA 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1467 TCGTGTTTGAGTATTATCCTCTCATGGATATTCTCAGTAGCTTTCTCGGTAGCTGTTGCA 1526
Query 1380 TTCATATTGCCCTGGATTTCCTCGTCACCTGTGCCGTATGCTTCAAACCCATGGATGGTA 1439
||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 1527 TTCATATTGCCATGGATTTCCTCGTCACCTGTGCCGTTTGCTTCTAACCCATGGATGGTA 1586
Query 1440 GTTGGATTGTTTGTGTCGCCTGCGATTTTGGGGTCAATTAGTGGTCAGCATGTGGCCTTT 1499
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1587 GTTGGATTGTTTGTGTCGCCTGCGATTTTGGGGTCAATAAGTGGTCAGCATGTGGCCTTT 1646
Query 1500 ATTTTCCTTCGGAAGAAATCTTCGAATAGGAATTCGAACAAAATGCAAGTCTCACCAAGA 1559
||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct 1647 ATTTTCCTTCGAAAGAAATCTTCGAACAGAAATTCAAACAAAATGCAAGTCTCACCAAGA 1706
Query 1560 CTACGAGATAACTTGGCCAGGCTGGAGGCTGAAAGATGGCTGTTTAAAGCTGGTTTTATA 1619
||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 1707 CTACGAGATAATTTGGCCAGGCTGGAGGCTGAAAGATGGCTATTTAAATCTGGTTTTATA 1766
Query 1620 CAGTGGCTTGTTCTTCTGGCCTTGGGAACCTATTATAAACTTGGATCGACTTACCTCGCT 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1767 CAGTGGCTTGTTCTTCTGGCCTTGGGAACCTATTATAAACTTGGATCGACTTACCTCGCT 1826
Query 1680 CTGGTTTGGCTAGTTCCTCCTGCATTTGCATATGGATTGCTCGAGGCAACTTTATCTCCA 1739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1827 CTGGTTTGGCTAGTTCCTCCTGCATTTGCATATGGATTGCTCGAGGCAACTTTATCTCCA 1886
Query 1740 ATCCGACTGCCAAAGCCCCTCAAACTTGCAACTCTGCTTATCAGCCTGGCTGTACCAATT 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1887 ATCCGACTGCCAAAGCCCCTCAAACTTGCAACTCTGCTTATCAGCCTGGCTGTACCAATT 1946
Query 1800 TTGGTTTCATCTGGCAGTTTTATCCAGTTGACGGGCACAATGATCGGCATGCTCATTCGA 1859
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1947 TTGGTTTCATCTGGCAGTTTTATCCAGTTGACAGGCACAATGATCGGCATGCTCATTCGA 2006
Query 1860 TTTGACAGTAACCCAGGCGGGACTCCAGAATGGCTAGGCAATGCATTGATCGCTGTTGTT 1919
||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||| |
Sbjct 2007 TTTGACAGTAACCCAGGAGTAACTCCAGAATGGCTAGGCAGTGCATTGATCGCTGTTGCT 2066
Query 1920 ATTGCTACTTTCATAAGTCTGACCACGGTATACCTGCTGGCCTATATTCATCTCTCCGGT 1979
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 2067 ATTGCTACTTTCATAAGTCTGTCCATGGTATACCTGCTGGCCTATATTCATCTCTCCGGT 2126
Query 1980 GCAAAAAAGTCGATTGTCACTGCATTATGCATTATCACTGCCCTCTCTCTTGCTCTTGTA 2039
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2127 GCAAAAAAGTCGATTGTCACAGCATTATGCATTATCACTGCCCTCTCTCTTGCTCTTGTA 2186
Query 2040 TCTTCTGGTGTTCTTCCTGCATTTACTGAGGATACTGCAAGAGCAGTAAATGTAGTACAT 2099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2187 TCTTCTGGTGTTCTTCCTGCATTTACTGAGGATACTGCAAGAGCAGTAAATGTAGTACAT 2246
Query 2100 GTTGTGGATACAAGCGGGCAAGATCAAGTGGAATTCATATCACTATTCTCAAACACTCCT 2159
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 2247 GTTGTGGATACAAGCGGGCAAGATCAAGTGGCGTTTATATCACTATTCTCAAACACTCCT 2306
Query 2160 GGAAACCTAAACATGGAAGCAGAGCAAATCAAAGAAGGTTTCAGATGTGGCAGAGAGAAT 2219
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 2307 GGAAACCTAAACATGGAAGCAGAGCAAATCAAAGAAGGGTTCAGATGTGGTAGAGAGAAT 2366
Query 2220 AAGATTGATTTTGTCAGTTTTGAAGCTAAATACAGTTGTGTGACCAAGAAGGACGCAAAG 2279
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 2367 AAGATTGATTTTGTCAGTTTTGAAGCTAAATACAATTGTGTGACCAAGAAGGACGCAGAG 2426
Query 2280 GTTGGATGGGACAAGA-ACGATATTCCAGTTCTGCGTGTCATAAACGACAAAGAGCGAGA 2338
|||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2427 GTTGGATGGGACAA-ACACGATATTCCAGTTCTGCGTGTCATAAACGACAAAGAAAGAGA 2485
Query 2339 CGAGAGAAGAGTCATAGCGGTTTCAATGGACACAGGAGGCTCATCGCGCTGGACACTTCG 2398
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2486 AGGGGGAAGAGTCATAGCGGTTTCAATGGACACAGGAGGCTCATCGCGCTGGACACTTCG 2545
Query 2399 CATTGACATGGATGAAATAGAAGACTTTACAATGCAAGTAGGTGAGGAGGAAGAAGAAGA 2458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2546 CATTGACATGGATGAAATAGAAGACTTTACAATGCAAGTAGGTGAGGAGGAAGAAGAAGA 2605
Query 2459 GTTGATGATAGCACGAGGCGAGAAAAGCTGCAATGAAGAAGGATGGCATCAAATTCAATT 2518
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2606 GTTGATGATAGAACGAGGCGAGAAAAGCAGCAATGAAGAAGGATGGCATCAAATTCAATT 2665
Query 2519 CTCAGGTGGTAAAAAGGCACCAACAAGCTTTGTTCTCAAACTTTACAAGAAGGAGGAAGA 2578
| ||||||| |||||||||||||| |||||||||||||||||||||||| | |||||||
Sbjct 2666 CGCAGGTGGGAAAAAGGCACCAACTAGCTTTGTTCTCAAACTTTACAAG--G-AGGAAGA 2722
Query 2579 AGTATCTGATGAGAAGAAGAAGCAAAGACCTCTCTTGAAACTCAGAACTGACTTGAACCG 2638
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2723 AGTATCTGATGATAAGAAGAAGCAAAGACCTCTCTTGAAACTCAGAACTGACTTGAACCG 2782
Query 2639 TCGCACTCCACAAGTCCAAAGGGTTCTCCAAAGACTTCCTCCATTTTGCACAATGTTTGG 2698
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2783 TCGCACTCCACAAGTCCAAAGGGTTCTCGAAAGACTTCCTCCATTTTGCACAATGTTTGG 2842
Query 2699 AAAATCCACTTCTCCTTTTACTCTCGCGTTTCTTGCTTCTCTTCCTTACACCAAATAACA 2758
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 2843 CAAATCCACTTCTCCTTTTACTCTCGCCTTTCTTGCTTCTCTTCCTTACACCAAATAAAA 2902
Query 2759 CTTCCCCACTCACTTGGC 2776
|||| |||||||||||||
Sbjct 2903 CTTCTCCACTCACTTGGC 2920
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137908926307
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5