BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg941635
Length=2470
Score E
Sequences producing significant alignments: (Bits) Value
AT5G20830.1 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase 1... 3978 0.0
AT3G43190.1 | Symbols: SUS4, ATSUS4 | sucrose synthase 4 | chr3... 2392 0.0
> AT5G20830.1 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase
1 | chr5:7050226-7054120 REVERSE LENGTH=2888
Length=2888
Score = 3978 bits (2154), Expect = 0.0
Identities = 2367/2472 (96%), Gaps = 6/2472 (0%)
Strand=Plus/Plus
Query 1 TGTT-TCTGCGTCTC---TTTGAATCAATGGCAAACGCTGAACGTATGATAACGCGCGTC 56
|||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 62 TGTTATCTGCGTCTCTTTTTTGGATCAATGGCAAACGCTGAACGTATGATAACGCGCGTC 121
Query 57 CACAGCCAACGTGAGCGTTTGAACGAAACGCTTGTTTCTGAGAGAAACGAAGTCCTTGCC 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 CACAGCCAACGTGAGCGTTTGAACGAAACGCTTGTTTCTGAGAGAAACGAAGTCCTTGCC 181
Query 117 TTGCTTTCCAGGATTGAAGCCAAAGGTAAAGGTATTTTACAACAAAACCAAATCATTGCT 176
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 182 TTGCTTTCCAGGGTTGAAGCCAAAGGTAAAGGTATTTTACAACAAAACCAGATCATTGCT 241
Query 177 GAATTCGAAGCTTTGCCTGGAGAAACCCAGAAGAAACTTGAAGGTGGTCCTTTCTTCGAC 236
||||||||||||||||||| | |||||| ||||||||||||||||||||||||||| |||
Sbjct 242 GAATTCGAAGCTTTGCCTGAACAAACCCGGAAGAAACTTGAAGGTGGTCCTTTCTTTGAC 301
Query 237 CTTCTCAAATCCACTCAGGAAGCAATTGTGTTGCCACCATGGGTTGCTCTTGCTGTGAGA 296
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 302 CTTCTCAAATCCACTCAGGAAGCAATTGTGTTGCCACCATGGGTTGCTCTAGCTGTGAGG 361
Query 297 CCAAGACCTGGTGTTTGGGAATACATAAGAGTCAATCTCCATGCTCTTGTGGTTGAAGAA 356
||||| |||||||||||||||||| || |||||||||||||||||||||| |||||||||
Sbjct 362 CCAAGGCCTGGTGTTTGGGAATACTTACGAGTCAATCTCCATGCTCTTGTCGTTGAAGAA 421
Query 357 CTCCAACCTGCTGAGTTTCTTCATTTCAAGGAAGAACTCGTTGATGGAGTTAAGAATGGT 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 CTCCAACCTGCTGAGTTTCTTCATTTCAAGGAAGAACTCGTTGATGGAGTTAAGAATGGT 481
Query 417 GATTTCACTCTTGAGCTTGATTTCGAACCATTCAATGCGTCTTTCCCTCGTCCAACACTC 476
||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 482 AATTTCACTCTTGAGCTTGATTTCGAGCCATTCAATGCGTCTATCCCTCGTCCAACACTC 541
Query 477 AACAAATACATTGGAAATGGTGTTGAGTTCCTTAACCGTCACTTATCAGCTAAGCTCTTT 536
||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct 542 CACAAATACATTGGAAATGGTGTTGACTTCCTTAACCGTCATTTATCGGCTAAGCTCTTC 601
Query 537 CATGACAAGGAGAGTTTGCTTCCATTGCTTAAGTTCCTTCGTCGACACAGCCACCAGGGC 596
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 602 CATGACAAGGAGAGTTTGCTTCCATTGCTTAAGTTCCTTCGTCTTCACAGCCACCAGGGC 661
Query 597 AAGAACCTGATGTTGAGTGAGAAAATTCAAAACCTCAACACTCTGCAACACACCTTGATG 656
||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| |
Sbjct 662 AAGAACCTGATGTTGAGCGAGAAGATTCAGAACCTCAACACTCTGCAACACACCTTGAGG 721
Query 657 AAAGCAGAGGAGTATCTTGCAGAGCTTAAG-CCTGAAACACCGTATGAAGAGTTTGAGGC 715
|||||||| |||||||| |||||||||||| || ||||||| ||||||||||||||||||
Sbjct 722 AAAGCAGAAGAGTATCTAGCAGAGCTTAAGTCC-GAAACACTGTATGAAGAGTTTGAGGC 780
Query 716 CAAGTTTGAGGAGATTGGTCTTGAGAGGGGATGGGGAGACAATGCTGAGCGTGTCCTTGA 775
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 781 CAAGTTTGAGGAGATTGGTCTTGAGAGGGGATGGGGAGACAATGCAGAGCGTGTCCTTGA 840
Query 776 CATGATCCGTCTTCTTTTGGACCTTCTTGAGGCGCCTGATCCTTGCACTCTTGAGACTTT 835
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 CATGATACGTCTTCTTTTGGACCTTCTTGAGGCGCCTGATCCTTGCACTCTTGAGACTTT 900
Query 836 TCTTGGAAGAGTACCAATGGTGTTCAACGTTGTGATCCTCTCTCCACATGGTTACTTTGC 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 TCTTGGAAGAGTACCAATGGTGTTCAACGTTGTGATCCTCTCTCCACATGGTTACTTTGC 960
Query 896 TCAGGACAATGTTCTTGGTTACCCTGACACTGGTGGCCAGGTTGTGTACATTCTTGATCA 955
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 961 TCAGGACAATGTTCTTGGTTACCCTGACACTGGTGGACAGGTTGTTTACATTCTTGATCA 1020
Query 956 AGTTCGTGCTCTGGAAACAGAGATGCTTCAGCGTATTAAGCAACAAGGACTCAACATTAA 1015
||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||
Sbjct 1021 AGTTCGTGCTCTGGAGATAGAGATGCTTCAACGTATTAAGCAACAAGGACTCAACATTAA 1080
Query 1016 ACCAAGAATTCTCATTCTCACTCGACTCCTCCCTGATGCGGTAGGAACCACATGTGGTGA 1075
|||||| ||||||||||| |||||||| || ||||||||||||||||| ||||| |||||
Sbjct 1081 ACCAAGGATTCTCATTCTAACTCGACTTCTACCTGATGCGGTAGGAACTACATGCGGTGA 1140
Query 1076 ACGTCTCGAGAGAGTTTATGATTCTGAGTACTGTGATATTCTCCGTGTGCCCTTCCGAAC 1135
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1141 ACGTCTCGAGAGAGTTTATGATTCTGAGTACTGTGATATTCTTCGTGTGCCCTTCAGAAC 1200
Query 1136 AGAAAAGGGTATAGTTCGCAAATGGATCTCAAGATTTGAAGTTTGGCCATATCTAGAGAC 1195
||| |||||||| |||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct 1201 AGAGAAGGGTATTGTTCGCAAATGGATCTCAAGGTTCGAAGTCTGGCCATATCTAGAGAC 1260
Query 1196 TTACACCGAGGATGCTGCGGTTGAGCTATCGAAAGAATTGAATGGAAAGCCTGACCTTAT 1255
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1261 TTACACCGAGGATGCTGCGGTTGAGCTATCGAAAGAATTGAATGGCAAGCCTGACCTTAT 1320
Query 1256 CATTGGTAACTACAGTGATGGAAATCTTGTTGCCTCTTTATTAGCTCACAAACTTGGTGT 1315
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1321 CATTGGTAACTACAGTGATGGAAATCTTGTTGCTTCTTTATTGGCTCACAAACTTGGTGT 1380
Query 1316 CACTCAGTGTACCATTGCTCATGCTCTGGAGAAGACAAAGTACCCGGATTCCGACATCTA 1375
||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||
Sbjct 1381 CACTCAGTGTACCATTGCTCATGCTCTTGAGAAAACAAAGTACCCGGATTCTGATATCTA 1440
Query 1376 CTGGAGGAAGCTTGACGAGAAGTACCATTTCTCATGCCAGTTCACTGCGGATATTTTCGC 1435
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 CTGGAAGAAGCTTGACGACAAGTACCATTTCTCATGCCAGTTCACTGCGGATATTTTCGC 1500
Query 1436 AATGAACCACACTGATTTCATCATCACCAGTACTTTCCAAGAAATTGCTGGAAGCAAGGA 1495
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1501 AATGAACCACACTGATTTCATCATCACTAGTACTTTCCAAGAAATTGCTGGAAGCAAAGA 1560
Query 1496 CACTGTTGGGCAGTATGAAAGCCACACGGCCTTTACTCTTCCCGGATTGTACCGAGTTGT 1555
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1561 AACTGTTGGGCAGTATGAAAGCCACACAGCCTTTACTCTTCCCGGATTGTATCGAGTTGT 1620
Query 1556 TCACGGGATCGATGTGTTTGATCCCAAGTTCAACATTGTCTCCCCTGGTGCTGATATGAA 1615
||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1621 TCACGGGATTGATGTGTTTGATCCCAAGTTCAACATTGTCTCTCCTGGTGCTGATATGAG 1680
Query 1616 CATCTACTTCCCTTACACAGAGGAGAAGCGTAGATTGACTAAATTCCACTCTGAGATCGA 1675
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1681 CATCTACTTCCCTTACACAGAGGAGAAGCGTAGATTGACTAAGTTCCACTCTGAGATCGA 1740
Query 1676 GGAGCTCCTCTACAGCGATGTCGAGAACGAAGAGCACCTGTGTGTCCTCAAGGACAAGAA 1735
||||||||||||||||||||| |||||| |||||||| | ||||| ||||||||||||||
Sbjct 1741 GGAGCTCCTCTACAGCGATGTTGAGAACAAAGAGCACTTATGTGTGCTCAAGGACAAGAA 1800
Query 1736 GAAGCCGATCCTCTTCACAATGGCTAGGCTCGACCGTGTCAAGAACTTGTCAGGTCTTGT 1795
||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1801 GAAGCCGATTCTCTTCACAATGGCTAGGCTTGATCGTGTCAAGAACTTGTCAGGTCTTGT 1860
Query 1796 TGAGTGGTACGGGAAGAACACCCGCCTGCGTGAGCTGGCTAACTTGGTGGTTGTGGGAGG 1855
||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| |||||
Sbjct 1861 TGAGTGGTACGGGAAGAACACCCGCTTGCGTGAGCTAGCTAACTTGGTTGTTGTTGGAGG 1920
Query 1856 AGACAGGAGGAAAGAATCAAAGGACAATGAAGAGAAAGCAGAGATGAAGAAAATGTATGA 1915
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1921 AGACAGGAGGAAAGAGTCAAAGGACAATGAAGAGAAAGCAGAGATGAAGAAAATGTATGA 1980
Query 1916 TCTCATTGAAGAATACAAGCTCAACGGTCAGTTCAGGTGGATCTCCTCTCAGATGAACCG 1975
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 1981 TCTCATTGAGGAATACAAGCTAAACGGTCAGTTCAGGTGGATCTCCTCTCAGATGGACCG 2040
Query 1976 GGTTAGGAACGGTGAGCTGTACAGGTACATCTGTGACACCAAGGGTGCATTTGTGCAACC 2035
||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||
Sbjct 2041 GGTAAGGAACGGTGAGCTGTACCGGTACATCTGTGACACCAAGGGTGCTTTTGTCCAACC 2100
Query 2036 TGCATTGTATGAAGCCTTTGGGTTGACTGTTGTGGAGGCCATGACTTGTGGATTACCGAC 2095
|||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 2101 TGCATTATATGAAGCCTTTGGGTTAACTGTTGTGGAGGCTATGACTTGTGGTTTACCGAC 2160
Query 2096 TTTCGCCACTTGCAAAGGTGGTCCAGCTGAGATCATTGTGCACGGTAAATCGGGTTTCCA 2155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2161 TTTCGCCACTTGCAAAGGTGGTCCAGCTGAGATCATTGTGCACGGTAAATCGGGTTTCCA 2220
Query 2156 CATTGACCCTTACCATGGTAATCAGGCTGCTGATACTCTTGCTGATTTCTTCACCAAGTG 2215
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CATTGACCCTTACCATGGTGATCAGGCTGCTGATACTCTTGCTGATTTCTTCACCAAGTG 2280
Query 2216 TAAGGAGGATCCATCTCACTGGGATGAGATCTCAAAAGGAGGGCTTCAGAGGATTGAGGA 2275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2281 TAAGGAGGATCCATCTCACTGGGATGAGATCTCAAAAGGAGGGCTTCAGAGGATTGAGGA 2340
Query 2276 GAAATACACTTGGCAAATCTACTCACAGAGGCTCCTGACACTGACTGGTGTGTATGGATT 2335
||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||
Sbjct 2341 GAAATACACTTGGCAAATCTATTCACAGAGGCTCTTGACATTGACTGGTGTGTATGGATT 2400
Query 2336 CTGGAAGCATGTCTCGAACCTTGACCATCTTGAGGCCCGCCGTTACCTTGAAATGTTCTA 2395
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 2401 CTGGAAGCATGTCTCGAACCTTGACCGTCTTGAGGCTCGCCGTTACCTTGAAATGTTCTA 2460
Query 2396 TGCATTGAAGTATCGCCCATTGGCTCAGGCTGTTCCTCTTGCTCAAGATGATTGAAGAGA 2455
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2461 TGCATTGAAGTATCGCCCATTGGCTCAGGCTGTTCCTCTTGCACAAGATGATTGAAGAGA 2520
Query 2456 AGAGAAAAGACT 2467
||||||||||||
Sbjct 2521 AGAGAAAAGACT 2532
> AT3G43190.1 | Symbols: SUS4, ATSUS4 | sucrose synthase 4 | chr3:15179020-15183989
REVERSE LENGTH=2764
Length=2764
Score = 2392 bits (1295), Expect = 0.0
Identities = 2081/2461 (85%), Gaps = 51/2461 (2%)
Strand=Plus/Plus
Query 23 AATGGCAAACGCTGAACGTATGATAACGCGCGTCCACAGCCAACGTGAGCGTTTGAACGA 82
|||||||||||| |||||| | |||||||| ||||||||||| || ||||||||| | |
Sbjct 153 AATGGCAAACGCAGAACGTGTAATAACGCGAGTCCACAGCCAGCGAGAGCGTTTGGATGC 212
Query 83 AACGCTTGTTTCTGAGAGAAACGAAGTCCTTGCCTTGCTTTCCAGGATTGAAGCCAAAGG 142
||| |||||| || ||| ||| ||||| |||| ||||| || ||| |||||||||||||
Sbjct 213 AACTCTTGTTGCTCAGAAAAATGAAGTATTTGCTTTGCTCTCAAGGGTTGAAGCCAAAGG 272
Query 143 TAAAGGTATTTTACAACAAAACCAAATCATTGCTGAATTCGAAGCTTTGCCTGGAGAAAC 202
||||| ||| ||||||| |||| |||||||||||||| || || ||||| ||| ||
Sbjct 273 CAAAGGCATTCTACAACACCACCAGATCATTGCTGAATTTGAGGCAATGCCTTTAGAGAC 332
Query 203 CCAGAAGAAACTTGAAGGTGGTCCTTTCTTCGACCTTCTCAAATCCA-CTCAGGAAGCAA 261
|||||||| ||| ||||||| |||||||||| ||||| || || |||| || ||||
Sbjct 333 ACAGAAGAAGCTTAAAGGTGGAGCTTTCTTCGAATTTCTCCGAT-CAGCTCAAGAGGCAA 391
Query 262 TTGTGTTGCCACCATGGGTTGCTCTT-GCTGTGAGACCAAGACCTGGTGTTTGGGAATAC 320
||||||| ||||||| |||||| || |||||||||||||||||||| ||||||||||||
Sbjct 392 TTGTGTTACCACCATTTGTTGCT-TTAGCTGTGAGACCAAGACCTGGAGTTTGGGAATAC 450
Query 321 ATAAGAGTCAATCTCCATGCTCTTGTGGTTGAAGAACTCCAACCTGCTGAGTTTCTTCAT 380
||||||| || ||||||| |||||| ||||| || || ||| || |||| | ||||||
Sbjct 451 GTAAGAGTTAACCTCCATGATCTTGTCGTTGAGGAGCTTCAAGCTTCTGAATATCTTCAA 510
Query 381 TTCAAGGAAGAACTCGTTGATGGAGTTAAGAATGGTGATTTCACTCTTGAGCTTGA-TTT 439
||||||||||| ||||| |||||| |||||||||| | ||||||||||| ||||| |||
Sbjct 511 TTCAAGGAAGAGCTCGTCGATGGAATTAAGAATGGAAACTTCACTCTTGAACTTGACTTT 570
Query 440 CGAACCATTCAATGCGTCTTTCCCTCGTCCAACACTCAACAAATACATTGGAAATGGTGT 499
||||||||||| ||| | ||||||||||| || |||||||| ||||||||| |||| ||
Sbjct 571 -GAACCATTCAACGCGGCATTCCCTCGTCCTACGCTCAACAAGTACATTGGAGATGGCGT 629
Query 500 TGAGTTCCTTAACCGTCACT-TATCAGCTAAGCTCTTTCATGACAAGGAGAGTTTGCTTC 558
||||||||| ||||| || | | || ||||||||||| |||||||||||||| |||| ||
Sbjct 630 TGAGTTCCTCAACCGCCA-TCTCTCGGCTAAGCTCTTCCATGACAAGGAGAGCTTGCATC 688
Query 559 CATTGCTTAAGTTCCTTCGTCGACACAGCCACCAGGGCAAGAAC-CTGATG-TTGAGTGA 616
| |||| |||||||| || | || |||| |||| ||| || |||||| || | |
Sbjct 689 CGCTGCTCAAGTTCCTCCGCCTCCATTCCCACGAGGGAAAG-ACTCTGATGCTT-AACAA 746
Query 617 GAAAATTCAAAACCTCAACACTCTGCAACAC-ACCTTGATG-AAAGCAGAGGAGTATCT- 673
| || || ||||| ||||| || |||||| | | ||| | ||||||||||| |||||
Sbjct 747 TAGGATCCAGAACCTAAACACCCTACAACACAATC-TGA-GAAAAGCAGAGGAATATCTA 804
Query 674 -TGCAGAGCTTAAGCCTGAAACAC-CGTA-TGAAGAGTTTGAGGC-CAAGTTTGAGGAGA 729
|| ||||| |||||||| |||| | || | ||||||||| || |||||| ||||||
Sbjct 805 ATG--GAGCTGAAGCCTGAGACACTC-TACT-CAGAGTTTGA-GCACAAGTTCCAGGAGA 859
Query 730 TTGGTCTTGAGAGGGGATGGGGAGACAATGCTGAGCGTGTCCTTGACATGATCCGTCTTC 789
||||||||||||| || |||||||||| || |||||||| ||| |||||||||||||||
Sbjct 860 TTGGTCTTGAGAGAGGCTGGGGAGACACCGCGGAGCGTGTTCTTAACATGATCCGTCTTC 919
Query 790 TT-TTGGACCTTCTTGAGGCGCCTGATCCTTGCACTCTTGAGACTTTTCTTGGAAGAGTA 848
|| || |||||||| ||||| ||||| ||||| |||||||||| ||| ||||||||| |
Sbjct 920 TTCTT-GACCTTCTCGAGGCACCTGACCCTTGTACTCTTGAGAATTTCCTTGGAAGAATC 978
Query 849 CCAATGGTGTTCAACGTTGTGATCCTCTCTCCACATGGTTACTTTGCTCAGGACAATGTT 908
|||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 979 CCAATGGTTTTCAACGTTGTGATCCTCTCTCCTCATGGATACTTTGCTCAGGACAATGTT 1038
Query 909 CTTGGTTACCCTGACACTGGTGGCCAGGTTGTGTACATTCTTGATCAAGTTCGTGCTCTG 968
||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1039 CTTGGTTACCCTGACACAGGTGGTCAGGTTGTTTACATTCTTGATCAAGTTCGTGCTCTC 1098
Query 969 GAAACAGAGATGCTTCAGCGTATTAAGCAACAAGGACTCAACATTAAACCAAGAATTCTC 1028
|||||||||||||| || || || || ||||||||||||||||| | || ||||| ||
Sbjct 1099 GAAACAGAGATGCTCCAACGCATCAAACAACAAGGACTCAACATCACTCCGAGAATCCT- 1157
Query 1029 ATTC-TCACTCGACTCCTCCCTGATGCGGTAGGAACCACATGTGGTGAACGTCTCGAGAG 1087
| || ||||||| || || ||||| || | ||||||||| |||||| ||||||| ||||
Sbjct 1158 AATCATCACTCGGCTGCTTCCTGACGCAGCAGGAACCACTTGTGGTCAACGTCTAGAGAA 1217
Query 1088 AGTTTA-TGATTCTGAGTACTGTGATATTCTCCGTGTGCCCTTCCGAACAGA-AAAGGGT 1145
||| || || ||| |||| |||||||| ||||||||||| || ||||||| ||| ||
Sbjct 1218 AGTGTACGGA-TCTCAGTATTGTGATATCCTCCGTGTGCCTTTTAGAACAGAGAAA-GGA 1275
Query 1146 ATAGTTCGCAAATGGATCTCAAGATTTGAAGTTTGGCCATATCTAGAGACTTACACCGAG 1205
|| |||||||||||||| ||||| ||||| || ||||| ||||||||||||| ||||||
Sbjct 1276 ATCGTTCGCAAATGGATATCAAGGTTTGAGGTCTGGCCGTATCTAGAGACTTTTACCGAG 1335
Query 1206 GATGCTGCGGTTGAGCTATCGAAAGAATTGAATGGAAAGCCTGACCTT-ATCATTGGTAA 1264
|||| ||| | ||| | |||||||| ||| | || |||||||| ||| |||||||| ||
Sbjct 1336 GATGTTGCCGCTGAAATCTCGAAAGAGTTGCAGGGGAAGCCTGA-CTTGATCATTGGAAA 1394
Query 1265 CTACAGTGATGGAAATCTTGTTGCCTCTTTATTAGCTCACAAACTTGGTGTCACTCAGTG 1324
|||||||||||| ||||||||||| || || ||||| |||||||||||||||||||||||
Sbjct 1395 CTACAGTGATGGTAATCTTGTTGCATCCTTGTTAGCACACAAACTTGGTGTCACTCAGTG 1454
Query 1325 TACCATTGCTCATGCTCTGGAGAAGACAAAGTACCCGGATTCCGACATCTACTGGAGGAA 1384
||||| ||||||||| |||||||||| |||||||||||||| || |||||||||| |||
Sbjct 1455 CACCATCGCTCATGCTTTGGAGAAGACTAAGTACCCGGATTCTGATATCTACTGGAAGAA 1514
Query 1385 GCTTGACGAGAAGTACCA-TTTCTCATGCCAGTTCACTGCGGATATTTTCGCAATGAACC 1443
||| ||||||||||| || ||| || ||||||||||| || ||| || |||| |||||||
Sbjct 1515 GCTCGACGAGAAGTATCACTTT-TCTTGCCAGTTCACGGCTGATCTTATCGCCATGAACC 1573
Query 1444 ACACTGATTTCATCATCACCAGTACTTTCCAAGAAATTGCTGGAAGCAAGGACACTGTTG 1503
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1574 ACACAGATTTCATCATCACAAGTACTTTCCAAGAAATTGCTGGAAGCAAGGACACTGTTG 1633
Query 1504 GGCAGTATGAAAGCCACACGGCCTTT-ACTCTTCCCGGATTGTACCGAGTTGTTCACGGG 1562
| || ||||| ||||||| | |||| || |||||||| |||||||| || ||||||||
Sbjct 1634 GTCAATATGAGAGCCACA-GATCTTTCACACTTCCCGGGTTGTACCGTGTAGTTCACGGT 1692
Query 1563 ATCGATGTGTTTGATCCCAAGTTCAACATTGTCTCCCCTGGTGCTGATATGAACATCTAC 1622
|| |||||||||||||| ||||||||||||||||| ||||| || ||||||| |||||||
Sbjct 1693 ATTGATGTGTTTGATCCAAAGTTCAACATTGTCTCTCCTGGAGCAGATATGAGCATCTAC 1752
Query 1623 TTCCCTTACACAGAGGAGAAGCGTAGATTGACTAAATTCCACTCT-GAGATCGAGGAGCT 1681
||| ||||||| ||||||||||||||||| ||| |||||| ||| ||||||||||||||
Sbjct 1753 TTCGCTTACACCGAGGAGAAGCGTAGATTAACTGCATTCCA-TCTAGAGATCGAGGAGCT 1811
Query 1682 CCTCTACAGCGATGTCGAGAACGAAGAGCACCTGTGTGTCCTCAAGGACAAGAAGAAGCC 1741
|||||| || ||||| || |||||||||||| | ||||| || |||||||||||||||||
Sbjct 1812 CCTCTATAGTGATGTTGAAAACGAAGAGCACTTATGTGTGCTTAAGGACAAGAAGAAGCC 1871
Query 1742 GATCCTCTTCACAATGGCTAGGCTCGACCGTGTCAAGAACTTGTCAGGTCTTGTTGAGTG 1801
|| | ||||| ||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct 1872 AATAATTTTCACCATGGCTAGGCTTGACCGTGTAAAGAACTTATCAGGTCTTGTTGAGTG 1931
Query 1802 GTACGGGAAGAACACCCGCCTGCGTGAGCTGGCT-AACTTGGTGGTTGTGGGAGGAGACA 1860
|||||| |||||||| ||| |||| || |||| | ||||||||||||||||| |||||||
Sbjct 1932 GTACGGTAAGAACACTCGCTTGCGCGAACTGG-TGAACTTGGTGGTTGTGGGTGGAGACA 1990
Query 1861 GGAGGAAAGAATCAAAGGACAATGAAGAGAAAGCAGAGATGAAGAAAATGTATGATCTCA 1920
|||||||||| ||| ||||||| |||||||| || |||||||||||||||||||| || |
Sbjct 1991 GGAGGAAAGAGTCACAGGACAACGAAGAGAAGGCCGAGATGAAGAAAATGTATGAACTGA 2050
Query 1921 TTGAAGAATACAAGCTCAACGGTCAGTTCAGGTGGATCTCCTCTCAGATGAACCGGGTTA 1980
| || |||||||| |||||||| || ||| | |||||||| || ||||||||| | || |
Sbjct 2051 TAGAGGAATACAAACTCAACGGGCAATTCCGATGGATCTCTTCACAGATGAACAGAGTGA 2110
Query 1981 GGAACGGTGAGCTGTACAGGTACATCTGTGACACCAAGGGTGCATTTGTGCAACCTGCA- 2039
| ||||||||||| ||| | ||||| |||||||| || |||||||||||||| |||||
Sbjct 2111 GAAACGGTGAGCTTTACCGTTACATATGTGACACTAAAGGTGCATTTGTGCAGCCTGCTC 2170
Query 2040 TTGTATGAAGCCTTTGGGTTGACTGTTGTGGAGGCCATGACTTGTGGATTACCGACTTTC 2099
|| |||||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||
Sbjct 2171 TT-TATGAAGCCTTTGGGTTGACTGTTGTTGAGGCTATGACCTGTGGGTTACCGACTTTC 2229
Query 2100 GCCACTTGCAAAGGTGGTCCAGCTGAGATCATTGTGCACGGTAAATCGGGTTTCCACATT 2159
|| ||||| || || ||||| ||||||||||||||||| || ||||| ||||||||||||
Sbjct 2230 GCTACTTGTAATGGCGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGTTTCCACATT 2289
Query 2160 GACCCTTACCATGGTAATCA-GGCTGCTGATACTCTTGCTGATTTCTTCACCAAGTGTAA 2218
|| || || |||||| | || ||| ||||| | |||||||||||||||||||||||||||
Sbjct 2290 GATCCATATCATGGTGA-CAAGGCAGCTGAGAGTCTTGCTGATTTCTTCACCAAGTGTAA 2348
Query 2219 GGAGGATCCATCTCACTGGGATGAGATCTCAAAAGGAGGGCTTCAGAGGATTGAGGAGAA 2278
| | || ||||||||||||||| |||||||| ||||| ||| ||||||| |||||||
Sbjct 2349 GCATGACCCATCTCACTGGGATCAGATCTCATTGGGAGGACTTGAGAGGATCCAGGAGAA 2408
Query 2279 ATACACTTGGCAAATCTACTCACAGAGGCTCCTGACACTGACTGGTGTGTATGGATTCTG 2338
||| ||||||||||| ||||||||||||||| ||||| |||||||||| || || || ||
Sbjct 2409 ATATACTTGGCAAATATACTCACAGAGGCTCTTGACATTGACTGGTGTCTACGGCTTTTG 2468
Query 2339 GAAGCATGTCTCGAACCTTGACCATCTTGAG-GCCCGCCGTTACCTTGAAATGTTCTATG 2397
||| ||||||||||||||||||| ||||||| | | | || |||||||| |||||||| |
Sbjct 2469 GAAACATGTCTCGAACCTTGACCGTCTTGAGAGTC-GTCGATACCTTGAGATGTTCTACG 2527
Query 2398 CATTGAAGTATCGCCCATTGGCTCAGGCTGTTCCTCTTGCTCAAGATGATTGAAGAGAAG 2457
|| ||||||| |||||| ||||||| ||||||||||||||||| || || |||| |||||
Sbjct 2528 CACTGAAGTACCGCCCACTGGCTCAAGCTGTTCCTCTTGCTCATGAAGAGTGAA-AGAAG 2586
Query 2458 A 2458
|
Sbjct 2587 A 2587
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122557841749
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5