BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg941659 Length=1179 Score E Sequences producing significant alignments: (Bits) Value AT5G21060.2 | Symbols: | Glyceraldehyde-3-phosphate dehydrogen... 1814 0.0 > AT5G21060.2 | Symbols: | Glyceraldehyde-3-phosphate dehydrogenase-like family protein | chr5:7148978-7152876 REVERSE LENGTH=1443 Length=1443 Score = 1814 bits (982), Expect = 0.0 Identities = 1103/1160 (95%), Gaps = 14/1160 (1%) Strand=Plus/Plus Query 7 AGAAGAGAAGAAGGATGAAGAAGATTGCGGTGCTTCTCATGGGATGCGGAGGCGTTGGCC 66 |||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct 118 AGAAGAGAGGAAGGATGAAGAAGATCCCGGTGCTTCTCATGGGCTGCGGAGGCGTTGGCC 177 Query 67 GCCACCTTCTTCAACACATCG-CGTCTTGCCGATCGCTTCACGCGAAAATGGGAGTTCAA 125 ||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||| | Sbjct 178 GCCACCTTCTTCAACACATCGTC-TCTTGCCGATCGCTTCACGCCAAAATGGGAGTTC-A 235 Query 126 T-TACGAGTTG-TTGGAGTATCTGACAGTAAATCTTTAGTTGCTCCAATGGATGTGCTCA 183 | |||| | || ||||||||| ||| |||||||| ||||||||||||||||||||||||| Sbjct 236 TATACG-GGTGATTGGAGTATGTGATAGTAAATCCTTAGTTGCTCCAATGGATGTGCTCA 294 Query 184 AAGAGGAACTGAATGATGAACTCTTGTCAGAAGTTTGCCGTATCAAATCATCTGGTTCGG 243 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| | Sbjct 295 AAGAGGAACTGAATGATGAACTCTTGTCAGAAGTTTGCCTTATCAAATCAACTGGTTCTG 354 Query 244 CATTATCGAAGTTGGGTGCTTT------AGGTGGATATCGAGT-GTTCAATGCTTCCGAG 296 |||||||||||||||||||||| ||||||||||||||| | || ||| ||||||| Sbjct 355 CATTATCGAAGTTGGGTGCTTTGGAAAAAGGTGGATATCGAGTCG-TCCATGATTCCGAG 413 Query 297 TTAAGCAGGGAAACAGAAGAGATCGCAAAACTTCTTGGTAAATCTGCAGGCTTAGCTGTT 356 ||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 414 TTAAGCACGGAAACAGAAGAGATTGCAAAACTTCTTGGTAAATCTACAGGCTTAGCTGTG 473 Query 357 GTGGATTGCTCAGCCAGCATGGAAACGATTGAAATATTGATCAAGGCAGTTGACTTGGGT 416 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 474 GTGGATTGCTCAGCCAGCATGGAGACGATTGAAATATTGATGAAGGCAGTTGACTTGGGT 533 Query 417 TGCTGTGTTGTCCTGGCAAATAAGAAGCCTCTTACTTCAACACTAGAACATTACGATAAA 476 |||||| ||||||||||||||||||||||| |||||||||| || ||||||||||| ||| Sbjct 534 TGCTGTATTGTCCTGGCAAATAAGAAGCCTGTTACTTCAACGCTGGAACATTACGACAAA 593 Query 477 TTGGCTTTGCATCCGCGATTCATCCGCCATGAATCTACTGTTGGTGCTGGACTTCCTGTC 536 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 594 TTGGCTTTGCATCCGCGATTCATCCGCCATGAATCTACTGTTGGTGCTGGTCTTCCTGTC 653 Query 537 ATCGCATCCTTGAACCGCATAATCTCGTCTGGAGATCCTGTTAATAAAATTGTCGGTAGT 596 ||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| Sbjct 654 ATCGCATCCTTGAACCGCATAATTTCGTCTGGAGATCCTGTTCATAGGATTGTCGGTAGT 713 Query 597 TTGAGCGGTACCTTGGGATATGTAATGAGTGAGCTTGAAGATGGCAAGCCTCTAAGCCAA 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 714 TTGAGCGGTACCTTGGGATATGTAATGAGTGAGCTTGAAGATGGCAAGCCTCTAAGCCAA 773 Query 657 GTTGTTCAAGCTGCCAAAACGCTGGGGTACACTGAACCAGATCCACGTGACGACCTCAGT 716 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct 774 GTTGTTCAAGCTGCCAAAAAGCTGGGGTACACTGAACCAGATCCACGTGACGACCTCGGT 833 Query 717 GGCATGGATGTTGCTAGAAAGGGTTTGATTCTTGCTCGACTTCTTGGGAAGAGGATAATT 776 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 834 GGCATGGATGTTGCTAGAAAGGGTTTGATTCTTGCTCGACTTCTTGGGAAGAGGATAATT 893 Query 777 ATGGACAGCATAAAGATAGAGAGCCTGTATCCTGAAGAGATGGGACCTGGACTCATGTCT 836 ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct 894 ATGGACAGCATTAAGATAGAGAGCTTGTATCCAGAAGAGATGGGACCTGGACTCATGTCT 953 Query 837 GTGGATGATTTCCTCCATAATGGAATAGTAAAACTTGATCAGAATATAGAGGAGAGAGTT 896 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 954 GTGGATGATTTCCTCCATAATGGAATAGTAAAACTTGATCAGAATATAGAGGAGAGAGTT 1013 Query 897 AAAAGAGCTTCATCAAATGGGTGTGTGCTTCGTTATGTCTGTGTGATTGAGGGTTCAAGC 956 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1014 AAAAAAGCTTCATCAAAAGGGTGTGTGCTTCGTTATGTCTGTGTGATTGAGGGTTCAAGC 1073 Query 957 GTTCAAGTTGGCATTCGAGAAGTTCCAAAAGATTCACCATTGGGACGATTAAGAGGCAGT 1016 |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 1074 GTTCAAGTTGGCATTCGAGAAGTTTCAAAAGATTCACCATTGGGACGGCTAAGAGGCAGT 1133 Query 1017 GACAATATAGTAGAGATATATAGCCGTTGCTACAAGGAGCAGCCTTTGGTGATTCAAGGT 1076 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1134 GACAATATAGTAGAGATATATAGCCGTTGCTACAAGGAGCAGCCTTTGGTGATTCAAGGT 1193 Query 1077 GCTGGAGCCGGGAACGACACGACTGCAGCCGGTGTTCTTGCAGACATCATCGATTTGCAG 1136 || ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 1194 GCCGGAGCCGGGAACGACACAACTGCAGCCGGTGTTCTTGCAGACATCATCGACTTGCAG 1253 Query 1137 GATCTTTTTCACTGAGAGGA 1156 |||||||||||||||||||| Sbjct 1254 GATCTTTTTCACTGAGAGGA 1273 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 57881228385 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5